Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d019479_circ_g.2 |
ID in PlantcircBase | zma_circ_005413 |
Alias | heat_test_circ_005256 |
Organism | Zea mays |
Position | chr7: 36175371-36175543 JBrowse» |
Reference genome | AGPv4.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d019479 |
Parent gene annotation |
granule-bound starch synthase1b |
Parent gene strand | - |
Alternative splicing | Zm00001d019479_circ_g.1 Zm00001d019479_circ_g.3 |
Support reads | NA |
Tissues | seedling |
Exon boundary | No-No |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d019479_T007:1 Zm00001d019479_T006:1 Zm00001d019479_T003:1 Zm00001d019479_T008:1 Zm00001d019479_T004:1 Zm00001d019479_T002:1 Zm00001d019479_T005:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.173549085 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |