Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT2G14255_circ_g.5 |
ID in PlantcircBase | ath_circ_013320 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr2: 6040098-6040196 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | PcircRNA_finder, circRNA_finder |
Parent gene | AT2G14255 |
Parent gene annotation |
Probable protein S-acyltransferase 23 |
Parent gene strand | + |
Alternative splicing | AT2G14255_circ_g.1 AT2G14255_circ_g.2 AT2G14255_circ_g.3 AT2G14255_circ_g.4 AT2G14255_circ_g.6 |
Support reads | 2 |
Tissues | inflorescences |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT2G14255.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.531335189 |
Functional Information | |
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Coding potential | Y |
Potential coding position |
6040164-6040100(-) |
Potential amino acid sequence |
MVKLFNAALTSGAVLRSHRSNYLTNTVGNPGAVMVKLFNAALTSGAVLRSHRSNYLTNTVGNPG AVMVKLFNAALTSGAVLRSHRSNYLTNTVGNPGAVMVKLFNAALTSGAVLRSHRSNY(-) |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |