Plant Circular RNA Database

Detail information of Csa2G139300_circ_g.1

			
						 General Information
					
						CircRNA Name
						Csa2G139300_circ_g.1
					
						ID in PlantcircBase
						csa_circ_000958
					
						Alias
						Chr2:8610321_8615317
					
						Organism
						
							Cucumis sativus						
					
						Position
						
							chrChr2: 8610321-8615317  JBrowse»						
					
						Reference genome
						
							Cucumis sativus v1.5						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Csa2G139300						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							Csa2G139300_circ_g.2 						
					
						Support reads
						NA
					
						Tissues
						leaf,root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Csa2G139300.1:3

General Information
CircRNA Name	Csa2G139300_circ_g.1
ID in PlantcircBase	csa_circ_000958
Alias	Chr2:8610321_8615317
Organism	Cucumis sativus
Position	chrChr2: 8610321-8615317 JBrowse»
Reference genome	Cucumis sativus v1.5
Type	e-circRNA
Identification method	CIRI2
Parent gene	Csa2G139300
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	Csa2G139300_circ_g.2
Support reads	NA
Tissues	leaf,root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Csa2G139300.1:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ACTATAAGCTGCAAATGTTTGATTTTCAGCTTGCGGTTCTATCTCATGGTTCCCTTCCACCACC
ATCAACGGAACTTCAGATACTAGAGGCTGCATATACctccaaaatgccatggccgaaactactt
tcacgatatgcactataatcaggttgctgatcccagcagaattttccttcagctgggcctgatg
tgaaattg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 694
Transcript exons: 8610321-8610605,8614807-8614997,8615100-8615317
CTCCAAAATGCCATGGCCGAAACTACTTTCACGATATGCACTATAATCAGGTTGCTGATCCCAG
CAGAATTTTCCTTCAGCTGGGCCTGATGTGAAATTGAATGCACAGAAGCCACCCATGTATTCAT
CCGGTGTCGAGAATGGGTCTGGACAGTTTCCAGGTTCATCAGCATGTTCAATTGCCATTTTCTC
TCGGTTACCACCATCACCTACTGTTATGTAGACAGGACCACAACGATCCAAAGTGTAGTCATAT
ACTCTATTCGACCTCTCATAGGCATGAACATGACCGTTGAAAACTATGTCAACTTTATACTTGT
AGAGCAAGTCTTCCATTGCCATTTTCATACACTCTGCTTCTCTATAATGAGCAGTGTAGCTGCT
GTACCAGGGTGGATGCCATGTAGCTATCAACCATGGAGTAACTTTCCTGTCAACTTTAGCCAGG
TCTTGCTCTAGCCATTTGTATTGATCACTTGATTTATCATATGAAATGTAGGCACCAAGCATTA
TAAAATGAATGCCACCAGCATTGAAAGAGTAGTAAAATGTCGAATAAGAGTTACTCTCTTCGGA
TGGGAATGAAAATCGGGAACTATAAGCTGCAAATGTTTGATTTTCAGCTTGCGGTTCTATCTCA
TGGTTCCCTTCCACCACCATCAACGGAACTTCAGATACTAGAGGCTGCATATAC
						
					

						Genomic sequence
						
							CTCCAAAATGCCATGGCCGAAACTACTTTCACGATATGCACTATAATCAGGTTGCTGATCCCAG
CAGAATTTTCCTTCAGCTGGGCCTGATGTGAAATTGAATGCACAGAAGCCACCCATGTATTCAT
CCGGTGTCGAGAATGGGTCTGGACAGTTTCCAGGTTCATCAGCATGTTCAATTGCCATTTTCTC
TCGGTTACCACCATCACCTACTGTTATGTAGACAGGACCACAACGATCCAAAGTGTAGTCATAT
ACTCTATTCGACCTCTCATAGGCATGAACCTGATCATGAATGTACACCCTCCATCAGAAACAAT
GTTGTGAGAGTACAGGGATATTTTGCAAATATTAGTACATAGTAGTAATGGTATATTAATAATT
AGGTCGCGAGATAGTCATGAAGTTTAATTATAAGTAGACAAAGTTAAGCAATTGGTGATTAAAT
TAGTGCATTGGAAAGATCTCAAGTTGAGGTCCAAGTACCTCAGATTACTTATTTATTTTGTAGT
TTCTTCTTAATATTGCAATATATTAGTTCATATATTTTGTGTTTGGAAACAAAACAAATATGAA
CAATATTTTCTATGTAAATATGCATTTAACCATTCAAATATTTGTTTACTTAAATTGTGCAAAT
AAAGGGAACATCTGCAGCAAGTTGCAAAGAATCTGAATTGGCACATTATGTTCTTGTGACATGG
TTATGATTTTGTAATTAGGAACTTATGATTTTAAAAAGATAAAAAAAAAAAAAAAAAAAGGCAA
AAGAGAAGCCAAAACAGCATTGAATAGGAAAAAGTAACAGAACAGTTCACCAATGAATAAGGAT
GAGTTTAGTAAGTTTTCGAATGGTGAAAAATACTTTTTATTTAACGGGTACGAGCCTCTTTATT
ACATTTAATAAAAGAGACTAATGTTCAATGTACAAAAGAATTATACCAAGAACGTAAAGGGTGA
TCACAAACAAAAGTATAGACGAACTGAATAACAAAAAACAACACAAACGAAACCTGAGCAAAAC
AGTAGAAAAATAAGAACAAAACCAACTTAAAAATCTTTCCACAAGAAGCCCAAAATGGATGGGA
GGAAAACACCAGGGAGAGCAAATAGCCAAGTAGCTTGTTGAAAAAATATGCCTCCAAGGTAGTT
CTTAAATCTTGAGTGAGTGACTAGACCCAGAATATTTGAGAAGAACATTAGAGGGCCAAAATAA
TAGAAGCATCCGTCGACGTGATCCACCAAACCAGCCTTCGAAAATAATTGGCTGAAAAAATAAG
ATCAGGTCTAAAATCTGAACTCAAACCAAAATGACTTCACATTTCTCAACAATGGACTTCAAAT
GATCTGAAATTTCACAGTGCTATCTGGAACAAGGTATTGAGATCAGATTCTAAAGGATCCTTAA
TCGACTAGTCATCATTTTCCGCTATCTATGACATATGTTCGGCTTCATTGCTGCTCACCCTAAA
AGGAGAGTCAAAATCTGAACAATCGTCTTTTTCGGTGATGAGAATGGGGTTTGGGTAGGAAAAC
CTCTAAAAAAATTTACCTTTGAATTAGGCATCGAGAAAACTGAGTATTTAAAATGAGGATGAGC
AGAGCTTTGAGAATGTGACTTGTATGATTGAGAATGGTCTTGCAAAAGGGCACAATTTTCCTCC
AAAAAATCAGGGTTCTGATCCAAAATCAAATTTTCTTTTGTAAACTATTTAAAAATCCTCTTAA
CCCTTTTCCTTCTAACAAAATGCTTTGGAGAAGTCTTGAAGGGATGTGGGAGAACTCTTGATTT
TGGATGTTTTTTAGACTTCTTCTTTTCTGACACAGATTTGGTCAAGGAAGAGAGGGAAGAAGAA
GAAAGAGCAATGAAGGAAGAGTTGGAAGTTCGAGCTTTTACAGAGGGGATTTCGGTGGGCACAA
AACCAGCAACGGGAATGAAAGCAAAAAACTTTGATGAGGTTGAGGGAAGTGACTTTCTAAAGGA
GGAAGGAGTTGCAAAGGGGTGGCCACACTTCGACTAACCTGCCTTTCCATCTATACTGAAACTT
GGAATTCCAATTGGCAATAAAGAATCCTCAGTCGCAATAATCCCTTTCCTCTCTTGAAGGCTTC
TCCTGCATTTTTCCTTTCACTTTTGGAGACCTTTTTCTTTTTCTCTCCTCTTCAAAAATGGCTC
TTTAATGGCATGTGACTTCTGGACTTCCTTTTCAAGGCTTACAACGAGCGAGTTTTGAATAAGA
CTTTTTGCACCAAGAGGATTTGCAACCCTTGGACTACTTTCAGGAACTCCATGCACCGTCGTAA
CCTCTCTTCCGAAAAACATGAGTTTGGTCATTTCCTCTTGTTTCTTCCATCGTCGGTGGGAAGA
AAGCTGTTGGGGAGTCTCTGTTTTTAGAATCTGATGCGATCTGAATCTGGTTTTCTTTTTGAAG
CATAAACAAACAAGACGTGAATGGATTTCTTGAAAAAATTTCTGGGTTACAACCCCTTCTAAAA
TTGAGCCAAAAGAATCTAACTCTTCATCAACCAAAACTTGCTTTAAACAAGCCATGTCGAATGG
GTTGGAGAAATCTTTTATAAGTAAAGCACCTTGAACTTTGATTGAGGATTCCAGACATTCAATA
TCTTCAAAATTCCAAAAAATGTTACCTCATTTTTCATCTAAAATTTCTATATTAGATGACATAA
AACCACATAAATTTTTCTGAACTTGAATTTTTGCTTCAGTAACATTAACAATGTTCAATGTTTC
ATTTGCAATAGATACTAGTCCATCATAATAAGACGCAATAGCTTCAAAGGTTTGCTGGCTCCAG
TAGTCTAAAGGTAAGATTTTAATCGAGATCCACTTGTTAAAACCCTTCACTACTTTCAGACAAC
TATGCAACTGTTTGTTCCACCTTTCAAATTTTAAATGAAAATGACAACAAACTTGCCATTGCCC
CGGTTATTCAATAAAATCTTCCACCTCACCTTGATCCAAATGGAGTAAAGCACTATCCATAGAC
AAAGGATTGATAATGACATCAGAATCACAGTATAATTTTAGAGTGCTAGCTATTTCTGTCCATT
CATCAAACTCAAACAGTTCAAAGATTGTTGAAATCAATTTTGCAAACTTCTGGATTCTTGATAA
TCCAATATTGGCCCGTACTCTGTTTTTCAGGTGCTAGAAAAGAGGAATGAATGTAATTCACTGG
CTTCACCATCTCTGAATAACTATCTTTCAACACCTTAAAATTTTGCTCCTAATCTTCTTACTGC
TTATTGATGACCTTAAATGGGATGGGTACCAAATCATGTATTCATGATTTGACCTTAAATGTGA
TGAGTACCAAGTCATGTATCCATGACTTGACCTTAAACGGGATGAGTACCAAGTCATGTATTCT
TTCTTTTGGAAAGGAGACAAGCTTCTTTATTAATAATAATACTCAAAATACAAGAGGGTTATAT
ATTGAGAATAATAGAGAAGCCTAGAAATGGGAGAGAGAGATAGAGAGAATCAGTAAGTGCACCC
GAACATCTCAACTAGGTTGATACCCCCAAGTCATGTATTCATGATTAGACCTTAAATGGGATGG
TACCAACTACCAAGTCAAGTAATCATGATTTGACCTTAAATGGGATGAGTACCAAGTCTGAGAA
ATTTGACTTAAGCCTCCAAAAATTTTGCTGAACAAAACCCAACCCTGCTTACCTTGACCTGAGG
GAATATGGATGAAGGATTTACCACCTATACAGGGCCAAACAATGCATCTCATTACCCAACCGAA
CTTAGCTCTAAATCTAGGAACTGAAACCATTCAATTTTCAACTTTTTTATTTTTGAAAAAGAAT
CCATCTTTCAGTTGTTGGTTCAAATCTAAAATGGCTTCGTGAAACCATATAAGCTGAGGGAATG
ATAATGACAGTATTAAGTTGGCTTTACATCTTCCACTTTAAATGATTCATCCTCGTACCAAATG
CAGAAAAACAAGTTATCAATATTACAACTTTCCACTTCCATCTCTGACTATGATTGAAGCATCC
AAAAAGGAAAGAGTTTGAAAACACACTCGCTGGAGAACTGAAAACGAAGGTCTTTTTGCTGGAA
AATTGATCGATAAGTGGTGTCGGAAAGGGAGAAGAGTAAGGGGAAGAGAGAGAGGAGAAAGGAG
AAGGAGAGAGGAGAGAGAACTTACCTTCCAGAAAAATCAATTTTTCACCCGATTTGTTTTTTTT
TAATAGTGAAAACTACTTTTCAAAAATTTCATAAGTTTCATTACATTATAAGAAAATGAATTTT
AAAATTCTAAAAGGACTTAAAAGCACTAAGATTTCACCACTATTTTCAAAGGTCACACCTAGTT
CATTCTAAATGCTATGAGAGTGGATCCAATCAACACTATACAGGTCATTTGTTATGTTGTCTAA
AATAGATCAATTAGTCGCAACAAAAAACGATGAAATAAAGAGAACAAGAAAATCATGAAAGAGG
ACATACATGACCGTTGAAAACTATGTCAACTTTATACTTGTAGAGCAAGTCTTCCATTGCCATT
TTCATACACTCTGCTTCTCTATAATGAGCAGTGTAGCTGCTGTACCAGGGTGGATGCCATGTAG
CTATCAACCATGGAGTAACTTTCCTGTCAACTTTAGCCAGGTCTTGCTCTAGCCATTTGTATTG
ATCACCTGCACCAGGCGAAATAAAGCATGGTAGATTCAGCAATTTTAGTTAATATGGAACTTTT
TAATCTAAAGGATTGTGGAAAGAGGAACAGGTTTTGGATTTACTTGATTTATCATATGAAATGT
AGGCACCAAGCATTATAAAATGAATGCCACCAGCATTGAAAGAGTAGTAAAATGTCGAATAAGA
GTTACTCTCTTCGGATGGGAATGAAAATCGGGAACTATAAGCTGCAAATGTTTGATTTTCAGCT
TGCGGTTCTATCTCATGGTTCCCTTCCACCACCATCAACGGAACTTCAGATACTAGAGGCTGCA
TATAC
						
					

			
		

Sequences
Splice junction sequence	ACTATAAGCTGCAAATGTTTGATTTTCAGCTTGCGGTTCTATCTCATGGTTCCCTTCCACCACC ATCAACGGAACTTCAGATACTAGAGGCTGCATATACctccaaaatgccatggccgaaactactt tcacgatatgcactataatcaggttgctgatcccagcagaattttccttcagctgggcctgatg tgaaattg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 694 Transcript exons: 8610321-8610605,8614807-8614997,8615100-8615317 CTCCAAAATGCCATGGCCGAAACTACTTTCACGATATGCACTATAATCAGGTTGCTGATCCCAG CAGAATTTTCCTTCAGCTGGGCCTGATGTGAAATTGAATGCACAGAAGCCACCCATGTATTCAT CCGGTGTCGAGAATGGGTCTGGACAGTTTCCAGGTTCATCAGCATGTTCAATTGCCATTTTCTC TCGGTTACCACCATCACCTACTGTTATGTAGACAGGACCACAACGATCCAAAGTGTAGTCATAT ACTCTATTCGACCTCTCATAGGCATGAACATGACCGTTGAAAACTATGTCAACTTTATACTTGT AGAGCAAGTCTTCCATTGCCATTTTCATACACTCTGCTTCTCTATAATGAGCAGTGTAGCTGCT GTACCAGGGTGGATGCCATGTAGCTATCAACCATGGAGTAACTTTCCTGTCAACTTTAGCCAGG TCTTGCTCTAGCCATTTGTATTGATCACTTGATTTATCATATGAAATGTAGGCACCAAGCATTA TAAAATGAATGCCACCAGCATTGAAAGAGTAGTAAAATGTCGAATAAGAGTTACTCTCTTCGGA TGGGAATGAAAATCGGGAACTATAAGCTGCAAATGTTTGATTTTCAGCTTGCGGTTCTATCTCA TGGTTCCCTTCCACCACCATCAACGGAACTTCAGATACTAGAGGCTGCATATAC
Genomic sequence	CTCCAAAATGCCATGGCCGAAACTACTTTCACGATATGCACTATAATCAGGTTGCTGATCCCAG CAGAATTTTCCTTCAGCTGGGCCTGATGTGAAATTGAATGCACAGAAGCCACCCATGTATTCAT CCGGTGTCGAGAATGGGTCTGGACAGTTTCCAGGTTCATCAGCATGTTCAATTGCCATTTTCTC TCGGTTACCACCATCACCTACTGTTATGTAGACAGGACCACAACGATCCAAAGTGTAGTCATAT ACTCTATTCGACCTCTCATAGGCATGAACCTGATCATGAATGTACACCCTCCATCAGAAACAAT GTTGTGAGAGTACAGGGATATTTTGCAAATATTAGTACATAGTAGTAATGGTATATTAATAATT AGGTCGCGAGATAGTCATGAAGTTTAATTATAAGTAGACAAAGTTAAGCAATTGGTGATTAAAT TAGTGCATTGGAAAGATCTCAAGTTGAGGTCCAAGTACCTCAGATTACTTATTTATTTTGTAGT TTCTTCTTAATATTGCAATATATTAGTTCATATATTTTGTGTTTGGAAACAAAACAAATATGAA CAATATTTTCTATGTAAATATGCATTTAACCATTCAAATATTTGTTTACTTAAATTGTGCAAAT AAAGGGAACATCTGCAGCAAGTTGCAAAGAATCTGAATTGGCACATTATGTTCTTGTGACATGG TTATGATTTTGTAATTAGGAACTTATGATTTTAAAAAGATAAAAAAAAAAAAAAAAAAAGGCAA AAGAGAAGCCAAAACAGCATTGAATAGGAAAAAGTAACAGAACAGTTCACCAATGAATAAGGAT GAGTTTAGTAAGTTTTCGAATGGTGAAAAATACTTTTTATTTAACGGGTACGAGCCTCTTTATT ACATTTAATAAAAGAGACTAATGTTCAATGTACAAAAGAATTATACCAAGAACGTAAAGGGTGA TCACAAACAAAAGTATAGACGAACTGAATAACAAAAAACAACACAAACGAAACCTGAGCAAAAC AGTAGAAAAATAAGAACAAAACCAACTTAAAAATCTTTCCACAAGAAGCCCAAAATGGATGGGA GGAAAACACCAGGGAGAGCAAATAGCCAAGTAGCTTGTTGAAAAAATATGCCTCCAAGGTAGTT CTTAAATCTTGAGTGAGTGACTAGACCCAGAATATTTGAGAAGAACATTAGAGGGCCAAAATAA TAGAAGCATCCGTCGACGTGATCCACCAAACCAGCCTTCGAAAATAATTGGCTGAAAAAATAAG ATCAGGTCTAAAATCTGAACTCAAACCAAAATGACTTCACATTTCTCAACAATGGACTTCAAAT GATCTGAAATTTCACAGTGCTATCTGGAACAAGGTATTGAGATCAGATTCTAAAGGATCCTTAA TCGACTAGTCATCATTTTCCGCTATCTATGACATATGTTCGGCTTCATTGCTGCTCACCCTAAA AGGAGAGTCAAAATCTGAACAATCGTCTTTTTCGGTGATGAGAATGGGGTTTGGGTAGGAAAAC CTCTAAAAAAATTTACCTTTGAATTAGGCATCGAGAAAACTGAGTATTTAAAATGAGGATGAGC AGAGCTTTGAGAATGTGACTTGTATGATTGAGAATGGTCTTGCAAAAGGGCACAATTTTCCTCC AAAAAATCAGGGTTCTGATCCAAAATCAAATTTTCTTTTGTAAACTATTTAAAAATCCTCTTAA CCCTTTTCCTTCTAACAAAATGCTTTGGAGAAGTCTTGAAGGGATGTGGGAGAACTCTTGATTT TGGATGTTTTTTAGACTTCTTCTTTTCTGACACAGATTTGGTCAAGGAAGAGAGGGAAGAAGAA GAAAGAGCAATGAAGGAAGAGTTGGAAGTTCGAGCTTTTACAGAGGGGATTTCGGTGGGCACAA AACCAGCAACGGGAATGAAAGCAAAAAACTTTGATGAGGTTGAGGGAAGTGACTTTCTAAAGGA GGAAGGAGTTGCAAAGGGGTGGCCACACTTCGACTAACCTGCCTTTCCATCTATACTGAAACTT GGAATTCCAATTGGCAATAAAGAATCCTCAGTCGCAATAATCCCTTTCCTCTCTTGAAGGCTTC TCCTGCATTTTTCCTTTCACTTTTGGAGACCTTTTTCTTTTTCTCTCCTCTTCAAAAATGGCTC TTTAATGGCATGTGACTTCTGGACTTCCTTTTCAAGGCTTACAACGAGCGAGTTTTGAATAAGA CTTTTTGCACCAAGAGGATTTGCAACCCTTGGACTACTTTCAGGAACTCCATGCACCGTCGTAA CCTCTCTTCCGAAAAACATGAGTTTGGTCATTTCCTCTTGTTTCTTCCATCGTCGGTGGGAAGA AAGCTGTTGGGGAGTCTCTGTTTTTAGAATCTGATGCGATCTGAATCTGGTTTTCTTTTTGAAG CATAAACAAACAAGACGTGAATGGATTTCTTGAAAAAATTTCTGGGTTACAACCCCTTCTAAAA TTGAGCCAAAAGAATCTAACTCTTCATCAACCAAAACTTGCTTTAAACAAGCCATGTCGAATGG GTTGGAGAAATCTTTTATAAGTAAAGCACCTTGAACTTTGATTGAGGATTCCAGACATTCAATA TCTTCAAAATTCCAAAAAATGTTACCTCATTTTTCATCTAAAATTTCTATATTAGATGACATAA AACCACATAAATTTTTCTGAACTTGAATTTTTGCTTCAGTAACATTAACAATGTTCAATGTTTC ATTTGCAATAGATACTAGTCCATCATAATAAGACGCAATAGCTTCAAAGGTTTGCTGGCTCCAG TAGTCTAAAGGTAAGATTTTAATCGAGATCCACTTGTTAAAACCCTTCACTACTTTCAGACAAC TATGCAACTGTTTGTTCCACCTTTCAAATTTTAAATGAAAATGACAACAAACTTGCCATTGCCC CGGTTATTCAATAAAATCTTCCACCTCACCTTGATCCAAATGGAGTAAAGCACTATCCATAGAC AAAGGATTGATAATGACATCAGAATCACAGTATAATTTTAGAGTGCTAGCTATTTCTGTCCATT CATCAAACTCAAACAGTTCAAAGATTGTTGAAATCAATTTTGCAAACTTCTGGATTCTTGATAA TCCAATATTGGCCCGTACTCTGTTTTTCAGGTGCTAGAAAAGAGGAATGAATGTAATTCACTGG CTTCACCATCTCTGAATAACTATCTTTCAACACCTTAAAATTTTGCTCCTAATCTTCTTACTGC TTATTGATGACCTTAAATGGGATGGGTACCAAATCATGTATTCATGATTTGACCTTAAATGTGA TGAGTACCAAGTCATGTATCCATGACTTGACCTTAAACGGGATGAGTACCAAGTCATGTATTCT TTCTTTTGGAAAGGAGACAAGCTTCTTTATTAATAATAATACTCAAAATACAAGAGGGTTATAT ATTGAGAATAATAGAGAAGCCTAGAAATGGGAGAGAGAGATAGAGAGAATCAGTAAGTGCACCC GAACATCTCAACTAGGTTGATACCCCCAAGTCATGTATTCATGATTAGACCTTAAATGGGATGG TACCAACTACCAAGTCAAGTAATCATGATTTGACCTTAAATGGGATGAGTACCAAGTCTGAGAA ATTTGACTTAAGCCTCCAAAAATTTTGCTGAACAAAACCCAACCCTGCTTACCTTGACCTGAGG GAATATGGATGAAGGATTTACCACCTATACAGGGCCAAACAATGCATCTCATTACCCAACCGAA CTTAGCTCTAAATCTAGGAACTGAAACCATTCAATTTTCAACTTTTTTATTTTTGAAAAAGAAT CCATCTTTCAGTTGTTGGTTCAAATCTAAAATGGCTTCGTGAAACCATATAAGCTGAGGGAATG ATAATGACAGTATTAAGTTGGCTTTACATCTTCCACTTTAAATGATTCATCCTCGTACCAAATG CAGAAAAACAAGTTATCAATATTACAACTTTCCACTTCCATCTCTGACTATGATTGAAGCATCC AAAAAGGAAAGAGTTTGAAAACACACTCGCTGGAGAACTGAAAACGAAGGTCTTTTTGCTGGAA AATTGATCGATAAGTGGTGTCGGAAAGGGAGAAGAGTAAGGGGAAGAGAGAGAGGAGAAAGGAG AAGGAGAGAGGAGAGAGAACTTACCTTCCAGAAAAATCAATTTTTCACCCGATTTGTTTTTTTT TAATAGTGAAAACTACTTTTCAAAAATTTCATAAGTTTCATTACATTATAAGAAAATGAATTTT AAAATTCTAAAAGGACTTAAAAGCACTAAGATTTCACCACTATTTTCAAAGGTCACACCTAGTT CATTCTAAATGCTATGAGAGTGGATCCAATCAACACTATACAGGTCATTTGTTATGTTGTCTAA AATAGATCAATTAGTCGCAACAAAAAACGATGAAATAAAGAGAACAAGAAAATCATGAAAGAGG ACATACATGACCGTTGAAAACTATGTCAACTTTATACTTGTAGAGCAAGTCTTCCATTGCCATT TTCATACACTCTGCTTCTCTATAATGAGCAGTGTAGCTGCTGTACCAGGGTGGATGCCATGTAG CTATCAACCATGGAGTAACTTTCCTGTCAACTTTAGCCAGGTCTTGCTCTAGCCATTTGTATTG ATCACCTGCACCAGGCGAAATAAAGCATGGTAGATTCAGCAATTTTAGTTAATATGGAACTTTT TAATCTAAAGGATTGTGGAAAGAGGAACAGGTTTTGGATTTACTTGATTTATCATATGAAATGT AGGCACCAAGCATTATAAAATGAATGCCACCAGCATTGAAAGAGTAGTAAAATGTCGAATAAGA GTTACTCTCTTCGGATGGGAATGAAAATCGGGAACTATAAGCTGCAAATGTTTGATTTTCAGCT TGCGGTTCTATCTCATGGTTCCCTTCCACCACCATCAACGGAACTTCAGATACTAGAGGCTGCA TATAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.971704334

Conservation Information
Conserved circRNAs	NA
PMCS	0.971704334

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							8615315-8615296(-)
8610528-8615296(-)
						
						Potential amino acid sequence
						
							MQPLVSEVPLMVVEGNHEIEPQAENQTFAAYSSRFSFPSEESNSYSTFYYSFNAGGIHFIMLGA
YISYDKSSDQYKWLEQDLAKVDRKVTPWLIATWHPPWYSSYTAHYREAECMKMAMEDLLYKYKV
DIVFNGHVHAYERSNRVYDYTLDRCGPVYITVGDGGNREKMAIEHADEPGNCPDPFSTPDEYMG
GFCAFNFTSGPAEGKFCWDQQPDYSAYRESSFGHGILEVYAASSI*
MVVTERKWQLNMLMNLETVQTHSRHRMNTWVASVHSISHQAQLKENSAGISNLIIVHIVKVVSA
MAFWRYMQPLVSEVPLMVVEGNHEIEPQAENQTFAAYSSRFSFPSEESNSYSTFYYSFNAGGIH
FIMLGAYISYDKSSDQYKWLEQDLAKVDRKVTPWLIATWHPPWYSSYTAHYREAECMKMAMEDL
LYKYKVDIVFNGHVHAYERSNRVYDYTLDRCGPVYITVGDGGNREKMAIEHADEPGNCPDPFST
PDEYMGGFCAFNFTSGPAEGKFCWDQQPDYSAYRESSFGHGILEVYAASSI*
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to salt stress in root

Functional Information
Coding potential	Y
Potential coding position	8615315-8615296(-) 8610528-8615296(-)
Potential amino acid sequence	MQPLVSEVPLMVVEGNHEIEPQAENQTFAAYSSRFSFPSEESNSYSTFYYSFNAGGIHFIMLGA YISYDKSSDQYKWLEQDLAKVDRKVTPWLIATWHPPWYSSYTAHYREAECMKMAMEDLLYKYKV DIVFNGHVHAYERSNRVYDYTLDRCGPVYITVGDGGNREKMAIEHADEPGNCPDPFSTPDEYMG GFCAFNFTSGPAEGKFCWDQQPDYSAYRESSFGHGILEVYAASSI* MVVTERKWQLNMLMNLETVQTHSRHRMNTWVASVHSISHQAQLKENSAGISNLIIVHIVKVVSA MAFWRYMQPLVSEVPLMVVEGNHEIEPQAENQTFAAYSSRFSFPSEESNSYSTFYYSFNAGGIH FIMLGAYISYDKSSDQYKWLEQDLAKVDRKVTPWLIATWHPPWYSSYTAHYREAECMKMAMEDL LYKYKVDIVFNGHVHAYERSNRVYDYTLDRCGPVYITVGDGGNREKMAIEHADEPGNCPDPFST PDEYMGGFCAFNFTSGPAEGKFCWDQQPDYSAYRESSFGHGILEVYAASSI*
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to salt stress in root

			
						 Other Information
					
						References
						Zhu et al., 2019

circRNA

Detail information of Csa2G139300_circ_g.1

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