Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d036949_circ_g.1 |
ID in PlantcircBase | zma_circ_008995 |
Alias | Zm06circ00038 |
Organism | Zea mays |
Position | chr6: 107114312-107129772 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI2 |
Parent gene | Zm00001d036949 |
Parent gene annotation |
Serine/threonine-protein phosphatase PP2A-5 catalytic subunit |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | NA |
Tissues | leaf, endosperm |
Exon boundary | Yes-No |
Splicing signals | GT-AG |
Number of exons covered | Zm00001d036949_T007:5 Zm00001d036949_T008:6 Zm00001d036949_T009:5 Zm00001d036949_T003:5 Zm00001d036949_T006:5 Zm00001d036949_T005:5 Zm00001d036949_T010:4 Zm00001d036949_T004:4 Zm00001d036949_T002:5 Zm00001d036949_T001:5 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.092028945 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Han et al., 2020 |