Splice junction sequence |
TTTTTGAAATCCTCATTAAGTTTTTCTTTTGCAGCTCAAGGGAAACTGTTTTGGCTTTGTGACA TTCGCATCTGCTGAAGCTGTGAAATTGGTCCTCCAGgctatcaatgagcagattatgtccttcg attacgaaatctcaaagattcagattttgactgctgattcccaagcatcttacatgaatggagt tgtgactc
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 828 Transcript exons: 4710801-4711283,4711368-4711524,4711618-4711739,4711826- 4711891 GCTATCAATGAGCAGATTATGTCCTTCGATTACGAAATCTCAAAGATTCAGATTTTGACTGCTG ATTCCCAAGCATCTTACATGAATGGAGTTGTGACTCTAGTCACAGGTTTACTAACCGTGAAAGA GGGGCAAAGAATGAGATTTTCTCAATCGTTTTTCCTTGTGCCGCTGAATGGAAGCTATTTCGTT CTCAACGATGTCTTTAGGTATGTTGCTGATGAGATTGTTGAACCAGAAGCTAACAAGAAAGAAG TCGAGGAGGTTATTCCTCAAGTGGTCCAACCAACAGAGCAGGTAGATGAAGTTGCAGAGCCGGT TACTATCCCTACCCAACAACCCGAGGCGAAACAGACAACCGAAAATACAGTGAAGAAACCAGAA AGAGCTGTAGCAAATGGACATCCCAAAACACAGGAGGATAATGTTGTGAACGATAAAAGCAATG GTGTTGATGCTCCCAAGAAATCATTTGCACATATTGTCCAAGATTTGGCTCAAAACGGTGCTAC ATTCAATGCCAAAGCTTCTCCTGCAAAGCCTAAGTCTAAGCCTGTTACAAAGCCGAGTGCTGCT CGTGAATCCAAAGCTCCTGCTCCTGTTTCTGAACACTCTTCTGCTGCAACAATCGACCAACAAG CTGAGGGTTATACGATATTTGTTGCCAACTTGCTCATGGACGCTACACCAGAGCAACTAAATGA AACATTCAAAGGTTTTGGAGCTATTACGAAAGATGGTATCCAAGTGAGAAGTTACAGGCTCAAG GGAAACTGTTTTGGCTTTGTGACATTCGCATCTGCTGAAGCTGTGAAATTGGTCCTCCAG
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Genomic sequence |
GCTATCAATGAGCAGATTATGTCCTTCGATTACGAAATCTCAAAGATTCAGATTTTGACTGCTG ATTCCCAAGCATCTTACATGAATGGAGTTGTGACTCTAGTCACAGGTTTACTAACCGTGAAAGA GGGGCAAAGAATGAGATTTTCTCAATCGTTTTTCCTTGTGCCGCTGAATGGAAGCTATTTCGTT CTCAACGATGTCTTTAGGTATGTTGCTGATGAGATTGTTGAACCAGAAGCTAACAAGAAAGAAG TCGAGGAGGTTATTCCTCAAGTGGTCCAACCAACAGAGCAGGTAGATGAAGTTGCAGAGCCGGT TACTATCCCTACCCAACAACCCGAGGCGAAACAGACAACCGAAAATACAGTGAAGAAACCAGAA AGAGCTGTAGCAAATGGACATCCCAAAACACAGGAGGATAATGTTGTGAACGATAAAAGCAATG GTGTTGATGCTCCCAAGAAATCATTTGCACATATTGTGAGTCCTCTTTTTTGTGTGAAATCCTA TTCTATAGCCTAATCTTTGCTCATATAATCTAAATATTTTGCAACTTACCCTTAGGTCCAAGAT TTGGCTCAAAACGGTGCTACATTCAATGCCAAAGCTTCTCCTGCAAAGCCTAAGTCTAAGCCTG TTACAAAGCCGAGTGCTGCTCGTGAATCCAAAGCTCCTGCTCCTGTTTCTGAACACTCTTCTGC TGCAACAATCGACCAACAAGGTTTTAAATCAATGTTTTAACATTTCAGAAAAACTGATTTTCTT TCACCTTTTTCTATGTCTTAATATGATTTTACCATTTTTCGTGTATCAGCTGAGGGTTATACGA TATTTGTTGCCAACTTGCTCATGGACGCTACACCAGAGCAACTAAATGAAACATTCAAAGGTTT TGGAGCTATTACGAAAGATGGTATCCAAGTGAGAAGTTACAGGGTGAGTTGTTTATTGAATGGA TCTTTTGAAGAAACTTGTTTCACAGCCAATTTTTTTGAAATCCTCATTAAGTTTTTCTTTTGCA GCTCAAGGGAAACTGTTTTGGCTTTGTGACATTCGCATCTGCTGAAGCTGTGAAATTGGTCCTC CAG |