Plant Circular RNA Database

Detail information of Zm00001d028464_circ_g.2

			
						 General Information
					
						CircRNA Name
						Zm00001d028464_circ_g.2
					
						ID in PlantcircBase
						zma_circ_006461
					
						Alias
						Zm01circ00048, ZmciR70
					
						Organism
						
							Zea mays						
					
						Position
						
							chr1: 35775946-35780774  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Zm00001d028464						
					
						Parent gene annotation
						
							Rho GTPase activation protein (RhoGAP) with PH domain
							
						Parent gene strand
						+
					
						Alternative splicing
						
							NA						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d028464_T037:6
Zm00001d028464_T039:6
Zm00001d028464_T043:4
Zm00001d028464_T010:6
Zm00001d028464_T035:6
Zm00001d028464_T033:6
Zm00001d028464_T036:6

General Information
CircRNA Name	Zm00001d028464_circ_g.2
ID in PlantcircBase	zma_circ_006461
Alias	Zm01circ00048, ZmciR70
Organism	Zea mays
Position	chr1: 35775946-35780774 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2
Parent gene	Zm00001d028464
Parent gene annotation	Rho GTPase activation protein (RhoGAP) with PH domain
Parent gene strand	+
Alternative splicing	NA
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d028464_T037:6 Zm00001d028464_T039:6 Zm00001d028464_T043:4 Zm00001d028464_T010:6 Zm00001d028464_T035:6 Zm00001d028464_T033:6 Zm00001d028464_T036:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGCGAGCAGTGGTGCTGGAGCTGTTCAACATTTTTCTGAAATTTTTGAGAAAACAAATGCTTCT
GCTGCCCTTGCTGCTGGCATTTTCCACCGGAAAGAGatactactcaagtttggaggtagcatca
gaatatttcaggtccggtgctgacaaaatttcaattggaagtgatgctgtttatgctgctgaag
ccttttta

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 562
Transcript exons: 35775946-35776054,35776123-35776176,35779494-35779581,35
779654-35779691,35779824-35779929,35780608-35780774
ATACTACTCAAGTTTGGAGGTAGCATCAGAATATTTCAGGTCCGGTGCTGACAAAATTTCAATT
GGAAGTGATGCTGTTTATGCTGCTGAAGCCTTTTTACAGACTGGTGTAAAGACAGGGAAAAGCA
GCTTGGAGCAAATCTCTAGAGTATATGGCAATCAGGCTGTAGTTGTCAGTATTGATCCTCGACG
GGTATATGTCAAAAGTCAAGAAGATGTGCCATTTAAAACTGTAAAGGTGTCCACTAAAGGTCCA
TCGGGAGAAGAATATGCATGGTACCAGTGCACAGTGAATGGTGGACGTGATAGCCGAGCTATAG
GAGCATATGAACTAGCGAAAGCTGTGGAAGAATTGGGCGCAGGAGAAATACTTCTTAACTGCAT
TGATTGTGATGGCCAAGGTTGTGGATTTGACATAGATTTGGTTAAAATGGTTTCTGATGCTGTG
ACAATCCCTGTCATTGCGAGCAGTGGTGCTGGAGCTGTTCAACATTTTTCTGAAATTTTTGAGA
AAACAAATGCTTCTGCTGCCCTTGCTGCTGGCATTTTCCACCGGAAAGAG
						
					

						Genomic sequence
						
							ATACTACTCAAGTTTGGAGGTAGCATCAGAATATTTCAGGTCCGGTGCTGACAAAATTTCAATT
GGAAGTGATGCTGTTTATGCTGCTGAAGCCTTTTTACAGACTGGTGTATGTATTTTATTTTTTT
GTACAATGTTCAGCTATTTCCCCATCATACAGTTCTTTCTGTGTATCAGGTAAAGACAGGGAAA
AGCAGCTTGGAGCAAATCTCTAGAGTATATGGCAATCAGGTTTTTCTTTATTCATTTCTACAGC
ATTAAAATTTTGTTTTCTATTGGTTTGCTGCCAAATATAAGTTAAAAGGTTGTATCTGGTTTTT
ACATTACTAGCTAGTTTTCATGATATATGAGAGATGTTTTCTTTTGTTACATCTTATTTTCTGA
AAGAAGTAACATAACAAAATACCATTTGCATGTCTTTGTTCTGCCTACGCGTTGTTCTTGTTGT
ATTTGGTCTCATATATAGAGAGACCTTGTCACGGTCTCTATCCTGTATTGGTGTATATATTTGG
TCCTAGTGTCTTCATATTGAATATGAGTTCTATTAATAATATATAGAGCCAAAAAACAGGGTAA
GAGTTCTTTCTCTTTCCCTGATCGTTCCTCTCTCATGTCACTTGATGGCTCTGTCTTGTCTTCT
TGCTGCTCTGAACATCTTCGCAGTCGGTTCCTTTGGCCTGGTGGCGCTCATATTCACGATCGCT
CGCCGGAGTTCGTCCATTGGCTGCGACAACCTGTCTGCCGGCGCTCGCTCTTGTTCGCCTGCAC
GCCTCTTGTGGTCTTGCCCATGTGTTCGCCTGTCAACGCACGCCACAACCGCTCGCCAGCTTCT
ACTCTTGTCGGCTCGCTCATCTGCCTGCCTTCTCTCCATGCAAGCCACCACCCGCTCCGGCCGC
CTTTCTCGTCTGCATCGGTCGCCTCTTCTTGGTCAAGCATCGTGTGTGGCCTCCTGCGCCGCTC
CTCCACCTGTGAACTTGTCTTGTTCACAATTGTTCACAATTTTGTGGTTGTTAGGTCCTTAAAA
AAGTTCATTGCCTGCTTGACTGAGATGTCACTGTCTTCCTCCAACGGTGGTGTTCCCGTCCTTC
ACTGTTCACTGCTATTTGATGGGACCAACTATCTTGCCTGGGTTCCTCACATGTGTTGGCACAT
GTGTGACATGTGCCTCTGGGAGTTTCTCACTGGCGAGCTTCCATGCATGTCTTCTCTCACGGCT
CCTGCGCGCCCTCAGATACCAGAGAAGGCAACTAATGAAGACAATGCGAAGCTTCTTGTTGATT
TTGATGATCTCATATGAGTCTCAGTTCATAGCTTACAAGTTGTGGTTGGATGAGGATGCTCGCG
CTGATTCTATTCTTGCTACAAGTGTGGAGGATCAATTTGCTGCACAGATTGTGCACCTTGATCG
GTCTCATCAGATGTGGAGTTATGAGCGTCCTAGTCACTCTACTTACCTAGCTGCTGTTCGTCAA
GATCAGTTGTTACGTCAGGGAGATTACAGTGGATTTCTACAGTCAGATGTCTATAGTTCGGCGT
CAGCTTGAAGCTCTTGGTCCATAGTTGTCCCTCAGCACCTGTGAATTTTGCCATGGTCAGTCGT
CTAACTTTCAGTTTTGTTGGACATATGACTTCATGCTCAGTTGTTCGTTCGTCATCCTCCTGTT
TCGTTGATGGATACTCTTGCAGATGTTTGTAATGAGGAGGCTCATCTTCATGTGGATGGTTTAC
TGCCATCTTCAGTGTTGGCTGCTTGTTCCGCGTTCTCAACCTGTTGTTACTCCATCTCCTTTAA
CTTTGTCAGCAGTCAGCACCCGCTCTCCTTTAACTTTGTCAGCACCCGCTCTCCTTTAACTTTG
TCAGCACCCGCTCCTTCTACAGGTGATGAGGGTGTTGGTATTCACTACAACTATTATGGTAAAG
ATGGTCATGAAGATGCTTTTTTGCTATAGAAAGAAGGCGCATAAGGCTTAGACTCGCTGTACTT
CATAGCCTGCTAGTAATGCCAGTAATAGAGTTTTTTAGGGGAGTTCCTGTTGTTTCAATCACTC
AGGAGATGCTTATGCTCCTTGGTCACCTTGCTGTGTCTTCATCGCCAGGTGCTGCTAATTATGG
GGGTGTTTGTTTGGGATTATAATCTGCCCAGATTATATAATCTAGCTTATTTTGATCTATAGGT
TCCGTTACTGTTTTTCAGTCTTCTACTGAGGGACCATCTTCCACATCCACTTTAGGTACTCGTG
CATAGGTTCTTATTCTGGTGCTTCTTTTCACATGACCCCTCATTGCACTGATCTTTCTTCTATG
TGTCCTTCCTCTTGTTCCCTTATTGTTCATTCAACTGATGGATCTTCTCTCTGTTGCTGGACAG
GACACTCTTTTGTCCAACTCTTTTTATGTTCCTGATGTTTTTCTATGTCCCAAATCTAACTATG
CAACTTATGTTCGCTGATCATGACTGTCATGTTATTCTTGATCCTAATGTTTGCTATATTCAGG
ATGTTGCACCGGTGGCCTGGTTGGTATTGTCCCTCGTCGTTGTGATTCTTAGCGTTTATGGGAG
CTTAACTGACTTCGTCTTCCTTCCGCTGCCCCTGCCATCTTATCGGCTCTGCTTTTCCTGCTTT
GTCCATGACTCCATCTCACTGTTTGCTCAATGGCATCATCGATTGGGTTATCTTTTTGGCTCCC
CTCTGTCCATTTTGATTTGGGTTATCTTTTTGGCTCCCTTATGTCCATTTTGATTTGTCGTGTT
CTTTTAGGTTTAGTTTCAAGTCATGAGTCTTTAGAACAGTTCCAGGGTTGTCATTTCGGTAAGC
AGATTCAGCTTCCCTGTCATTCTAGTGAGTCAGTGTCCACTGTCCAAGCATCATTTTGATCTTG
TTCATTCAGATCTATGGGTCCTGCATAACACTTCTATGTTTACCTTTTTCTTTTTTGGTGAAAC
TCTGATTTGTGGTCACATATCCTATGAAACTACTTATTCCATCTCAAATTATAAGATGTTTTAG
CATTTCTACATTCATAGTTTCTACTTTCTACTATGTATCTAATCATAACATATATCTAGGTGAA
ACAAAAGCTATGATTTTAGAAAAATCAAAACATCTTATAATTGGGAACGAAGAGAGTATTAAAG
CTCTTCTCGATTTCACCATTTATTGACACGATGACTCATGACCGCCTATCAAGGTTCAATAAGC
TGAATTTATTATCATTCAAAATTATTAAAAAAGAATTCAACTTAGTTGAAAACTGAAGTTAACG
AGATGATATCATTTTGCCTTGATGACCAATTTGAGTAAAAGCCAATGGCAACCATTTAGTTCTT
GCCAATCTTTTCGGTTGTGCTGCTCATGCACTGATCAATCAATTCAGTAAAAGATTTACTTCTA
TATGTGCCTCATTTTGCTAGAAATGTTTTAAACATTATCCACAATCTACCTTGCTGGTTAGCAT
TCATCTTAACCATTTTCATACAAATAGCTGTTTCTATTTTAACCTAATTGTTATAATAACTTAT
AAATCACTTGTTGTAATTATTTCCATAGGCTGTAGTTGTCAGTATTGATCCTCGACGGGTATAT
GTCAAAAGTCAAGAAGATGTGCCATTTAAAACTGTAAAGGTGTCCACTAAAGGTATATTCTTAT
TATTTCTCTATGATGTAAACTAGCAGTTGTGTTAAGTTCTCAAGTCTCGTGTATTCCCAGGTCC
ATCGGGAGAAGAATATGCATGGTACCAGTGCACAGTAAGTCATTCTTGTCTGGCTTAACCACAG
ACTGTTTCAAATTTGTGCTGACTTCATTTCTTGCTCGGTTGAATTTTAGGTCTAGTACTGGCAG
CTGACTTACAGTGGCATGATTATCGATTTATATTTCAGGTGAATGGTGGACGTGATAGCCGAGC
TATAGGAGCATATGAACTAGCGAAAGCTGTGGAAGAATTGGGCGCAGGAGAAATACTTCTTAAC
TGCATTGATTGTGATGGTATATTCACAGTTGTTGAATGATTTATGTTTTGCATGCTATGACATA
GTTACAATGTTTCAGCTTTGTTGCACTATGGTTTTGTAATCCATTTCATACAAGTTTTATGACA
TGTGCTTTTTCGGTCCAGATTTATTATTTTACCCCATTCATTCATCTACACAAGAATCAAGAAT
GGCTAGGTTTTAAGTTGGCTCTCCAAGCCTACCACAACCTTCTGTTATCTTGGCTAGGGATGGG
CTATGTTGAAACAGCCAGTTGAATGCCCTATTCACATATAATTTTTTTTCCTGATGGTGCCTTA
GCACATGTTTCTTGTTTCCTCGAGTACGCAAATGTGCATATAAATATATTAAGAATAAAAGGAT
TTTGAACTCATAGAACACCAAAAACACCTTAGCACGTTTCTCAGAAAGAGTGCAAGTGCATAAT
TGTTGACTAAGTTAAGCAAGCGCTCTATAGCCTTGGAAGCTGGGTTTGCCTATGTAATATGTTA
GTATAGGTTGAAATAAATAGATATGAGCATTTAGTTCTCTTATAAATATTTAATAAGTTATACT
TTGTGTTTGGAAATTCGTGGTTAGGGTCACTTGAGGTTGCATGTTTGCTTGAATTTTCATGTAA
ATTTGTTACTCCTTTTATATGAGAATATATAGTCATGATTGACTTATCCTGCAGGCCAAGGTTG
TGGATTTGACATAGATTTGGTTAAAATGGTTTCTGATGCTGTGACAATCCCTGTCATTGCGAGC
AGTGGTGCTGGAGCTGTTCAACATTTTTCTGAAATTTTTGAGAAAACAAATGCTTCTGCTGCCC
TTGCTGCTGGCATTTTCCACCGGAAAGAG
						
					

			
		

Sequences
Splice junction sequence	TGCGAGCAGTGGTGCTGGAGCTGTTCAACATTTTTCTGAAATTTTTGAGAAAACAAATGCTTCT GCTGCCCTTGCTGCTGGCATTTTCCACCGGAAAGAGatactactcaagtttggaggtagcatca gaatatttcaggtccggtgctgacaaaatttcaattggaagtgatgctgtttatgctgctgaag ccttttta
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 562 Transcript exons: 35775946-35776054,35776123-35776176,35779494-35779581,35 779654-35779691,35779824-35779929,35780608-35780774 ATACTACTCAAGTTTGGAGGTAGCATCAGAATATTTCAGGTCCGGTGCTGACAAAATTTCAATT GGAAGTGATGCTGTTTATGCTGCTGAAGCCTTTTTACAGACTGGTGTAAAGACAGGGAAAAGCA GCTTGGAGCAAATCTCTAGAGTATATGGCAATCAGGCTGTAGTTGTCAGTATTGATCCTCGACG GGTATATGTCAAAAGTCAAGAAGATGTGCCATTTAAAACTGTAAAGGTGTCCACTAAAGGTCCA TCGGGAGAAGAATATGCATGGTACCAGTGCACAGTGAATGGTGGACGTGATAGCCGAGCTATAG GAGCATATGAACTAGCGAAAGCTGTGGAAGAATTGGGCGCAGGAGAAATACTTCTTAACTGCAT TGATTGTGATGGCCAAGGTTGTGGATTTGACATAGATTTGGTTAAAATGGTTTCTGATGCTGTG ACAATCCCTGTCATTGCGAGCAGTGGTGCTGGAGCTGTTCAACATTTTTCTGAAATTTTTGAGA AAACAAATGCTTCTGCTGCCCTTGCTGCTGGCATTTTCCACCGGAAAGAG
Genomic sequence	ATACTACTCAAGTTTGGAGGTAGCATCAGAATATTTCAGGTCCGGTGCTGACAAAATTTCAATT GGAAGTGATGCTGTTTATGCTGCTGAAGCCTTTTTACAGACTGGTGTATGTATTTTATTTTTTT GTACAATGTTCAGCTATTTCCCCATCATACAGTTCTTTCTGTGTATCAGGTAAAGACAGGGAAA AGCAGCTTGGAGCAAATCTCTAGAGTATATGGCAATCAGGTTTTTCTTTATTCATTTCTACAGC ATTAAAATTTTGTTTTCTATTGGTTTGCTGCCAAATATAAGTTAAAAGGTTGTATCTGGTTTTT ACATTACTAGCTAGTTTTCATGATATATGAGAGATGTTTTCTTTTGTTACATCTTATTTTCTGA AAGAAGTAACATAACAAAATACCATTTGCATGTCTTTGTTCTGCCTACGCGTTGTTCTTGTTGT ATTTGGTCTCATATATAGAGAGACCTTGTCACGGTCTCTATCCTGTATTGGTGTATATATTTGG TCCTAGTGTCTTCATATTGAATATGAGTTCTATTAATAATATATAGAGCCAAAAAACAGGGTAA GAGTTCTTTCTCTTTCCCTGATCGTTCCTCTCTCATGTCACTTGATGGCTCTGTCTTGTCTTCT TGCTGCTCTGAACATCTTCGCAGTCGGTTCCTTTGGCCTGGTGGCGCTCATATTCACGATCGCT CGCCGGAGTTCGTCCATTGGCTGCGACAACCTGTCTGCCGGCGCTCGCTCTTGTTCGCCTGCAC GCCTCTTGTGGTCTTGCCCATGTGTTCGCCTGTCAACGCACGCCACAACCGCTCGCCAGCTTCT ACTCTTGTCGGCTCGCTCATCTGCCTGCCTTCTCTCCATGCAAGCCACCACCCGCTCCGGCCGC CTTTCTCGTCTGCATCGGTCGCCTCTTCTTGGTCAAGCATCGTGTGTGGCCTCCTGCGCCGCTC CTCCACCTGTGAACTTGTCTTGTTCACAATTGTTCACAATTTTGTGGTTGTTAGGTCCTTAAAA AAGTTCATTGCCTGCTTGACTGAGATGTCACTGTCTTCCTCCAACGGTGGTGTTCCCGTCCTTC ACTGTTCACTGCTATTTGATGGGACCAACTATCTTGCCTGGGTTCCTCACATGTGTTGGCACAT GTGTGACATGTGCCTCTGGGAGTTTCTCACTGGCGAGCTTCCATGCATGTCTTCTCTCACGGCT CCTGCGCGCCCTCAGATACCAGAGAAGGCAACTAATGAAGACAATGCGAAGCTTCTTGTTGATT TTGATGATCTCATATGAGTCTCAGTTCATAGCTTACAAGTTGTGGTTGGATGAGGATGCTCGCG CTGATTCTATTCTTGCTACAAGTGTGGAGGATCAATTTGCTGCACAGATTGTGCACCTTGATCG GTCTCATCAGATGTGGAGTTATGAGCGTCCTAGTCACTCTACTTACCTAGCTGCTGTTCGTCAA GATCAGTTGTTACGTCAGGGAGATTACAGTGGATTTCTACAGTCAGATGTCTATAGTTCGGCGT CAGCTTGAAGCTCTTGGTCCATAGTTGTCCCTCAGCACCTGTGAATTTTGCCATGGTCAGTCGT CTAACTTTCAGTTTTGTTGGACATATGACTTCATGCTCAGTTGTTCGTTCGTCATCCTCCTGTT TCGTTGATGGATACTCTTGCAGATGTTTGTAATGAGGAGGCTCATCTTCATGTGGATGGTTTAC TGCCATCTTCAGTGTTGGCTGCTTGTTCCGCGTTCTCAACCTGTTGTTACTCCATCTCCTTTAA CTTTGTCAGCAGTCAGCACCCGCTCTCCTTTAACTTTGTCAGCACCCGCTCTCCTTTAACTTTG TCAGCACCCGCTCCTTCTACAGGTGATGAGGGTGTTGGTATTCACTACAACTATTATGGTAAAG ATGGTCATGAAGATGCTTTTTTGCTATAGAAAGAAGGCGCATAAGGCTTAGACTCGCTGTACTT CATAGCCTGCTAGTAATGCCAGTAATAGAGTTTTTTAGGGGAGTTCCTGTTGTTTCAATCACTC AGGAGATGCTTATGCTCCTTGGTCACCTTGCTGTGTCTTCATCGCCAGGTGCTGCTAATTATGG GGGTGTTTGTTTGGGATTATAATCTGCCCAGATTATATAATCTAGCTTATTTTGATCTATAGGT TCCGTTACTGTTTTTCAGTCTTCTACTGAGGGACCATCTTCCACATCCACTTTAGGTACTCGTG CATAGGTTCTTATTCTGGTGCTTCTTTTCACATGACCCCTCATTGCACTGATCTTTCTTCTATG TGTCCTTCCTCTTGTTCCCTTATTGTTCATTCAACTGATGGATCTTCTCTCTGTTGCTGGACAG GACACTCTTTTGTCCAACTCTTTTTATGTTCCTGATGTTTTTCTATGTCCCAAATCTAACTATG CAACTTATGTTCGCTGATCATGACTGTCATGTTATTCTTGATCCTAATGTTTGCTATATTCAGG ATGTTGCACCGGTGGCCTGGTTGGTATTGTCCCTCGTCGTTGTGATTCTTAGCGTTTATGGGAG CTTAACTGACTTCGTCTTCCTTCCGCTGCCCCTGCCATCTTATCGGCTCTGCTTTTCCTGCTTT GTCCATGACTCCATCTCACTGTTTGCTCAATGGCATCATCGATTGGGTTATCTTTTTGGCTCCC CTCTGTCCATTTTGATTTGGGTTATCTTTTTGGCTCCCTTATGTCCATTTTGATTTGTCGTGTT CTTTTAGGTTTAGTTTCAAGTCATGAGTCTTTAGAACAGTTCCAGGGTTGTCATTTCGGTAAGC AGATTCAGCTTCCCTGTCATTCTAGTGAGTCAGTGTCCACTGTCCAAGCATCATTTTGATCTTG TTCATTCAGATCTATGGGTCCTGCATAACACTTCTATGTTTACCTTTTTCTTTTTTGGTGAAAC TCTGATTTGTGGTCACATATCCTATGAAACTACTTATTCCATCTCAAATTATAAGATGTTTTAG CATTTCTACATTCATAGTTTCTACTTTCTACTATGTATCTAATCATAACATATATCTAGGTGAA ACAAAAGCTATGATTTTAGAAAAATCAAAACATCTTATAATTGGGAACGAAGAGAGTATTAAAG CTCTTCTCGATTTCACCATTTATTGACACGATGACTCATGACCGCCTATCAAGGTTCAATAAGC TGAATTTATTATCATTCAAAATTATTAAAAAAGAATTCAACTTAGTTGAAAACTGAAGTTAACG AGATGATATCATTTTGCCTTGATGACCAATTTGAGTAAAAGCCAATGGCAACCATTTAGTTCTT GCCAATCTTTTCGGTTGTGCTGCTCATGCACTGATCAATCAATTCAGTAAAAGATTTACTTCTA TATGTGCCTCATTTTGCTAGAAATGTTTTAAACATTATCCACAATCTACCTTGCTGGTTAGCAT TCATCTTAACCATTTTCATACAAATAGCTGTTTCTATTTTAACCTAATTGTTATAATAACTTAT AAATCACTTGTTGTAATTATTTCCATAGGCTGTAGTTGTCAGTATTGATCCTCGACGGGTATAT GTCAAAAGTCAAGAAGATGTGCCATTTAAAACTGTAAAGGTGTCCACTAAAGGTATATTCTTAT TATTTCTCTATGATGTAAACTAGCAGTTGTGTTAAGTTCTCAAGTCTCGTGTATTCCCAGGTCC ATCGGGAGAAGAATATGCATGGTACCAGTGCACAGTAAGTCATTCTTGTCTGGCTTAACCACAG ACTGTTTCAAATTTGTGCTGACTTCATTTCTTGCTCGGTTGAATTTTAGGTCTAGTACTGGCAG CTGACTTACAGTGGCATGATTATCGATTTATATTTCAGGTGAATGGTGGACGTGATAGCCGAGC TATAGGAGCATATGAACTAGCGAAAGCTGTGGAAGAATTGGGCGCAGGAGAAATACTTCTTAAC TGCATTGATTGTGATGGTATATTCACAGTTGTTGAATGATTTATGTTTTGCATGCTATGACATA GTTACAATGTTTCAGCTTTGTTGCACTATGGTTTTGTAATCCATTTCATACAAGTTTTATGACA TGTGCTTTTTCGGTCCAGATTTATTATTTTACCCCATTCATTCATCTACACAAGAATCAAGAAT GGCTAGGTTTTAAGTTGGCTCTCCAAGCCTACCACAACCTTCTGTTATCTTGGCTAGGGATGGG CTATGTTGAAACAGCCAGTTGAATGCCCTATTCACATATAATTTTTTTTCCTGATGGTGCCTTA GCACATGTTTCTTGTTTCCTCGAGTACGCAAATGTGCATATAAATATATTAAGAATAAAAGGAT TTTGAACTCATAGAACACCAAAAACACCTTAGCACGTTTCTCAGAAAGAGTGCAAGTGCATAAT TGTTGACTAAGTTAAGCAAGCGCTCTATAGCCTTGGAAGCTGGGTTTGCCTATGTAATATGTTA GTATAGGTTGAAATAAATAGATATGAGCATTTAGTTCTCTTATAAATATTTAATAAGTTATACT TTGTGTTTGGAAATTCGTGGTTAGGGTCACTTGAGGTTGCATGTTTGCTTGAATTTTCATGTAA ATTTGTTACTCCTTTTATATGAGAATATATAGTCATGATTGACTTATCCTGCAGGCCAAGGTTG TGGATTTGACATAGATTTGGTTAAAATGGTTTCTGATGCTGTGACAATCCCTGTCATTGCGAGC AGTGGTGCTGGAGCTGTTCAACATTTTTCTGAAATTTTTGAGAAAACAAATGCTTCTGCTGCCC TTGCTGCTGGCATTTTCCACCGGAAAGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.066573965

Conservation Information
Conserved circRNAs	NA
PMCS	0.066573965

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							35780644-35775993(+)
35780732-35775993(+)
35775973-35780701(-)
						
						Potential amino acid sequence
						
							MVSDAVTIPVIASSGAGAVQHFSEIFEKTNASAALAAGIFHRKEILLKFGGSIRIFQVRC*(+)
MLLLPLLLAFSTGKRYYSSLEVASEYFRSGADKISIGSDAVYAAEAFLQTGVKTGKSSLEQISR
VYGNQAVVVSIDPRRVYVKSQEDVPFKTVKVSTKGPSGEEYAWYQCTVNGGRDSRAIGAYELAK
AVEELGAGEILLNCIDCDGQGCGFDIDLVKMVSDAVTIPVIASSGAGAVQHFSEIFEKTNASAA
LAAGIFHRKEILLKFGGSIRIFQVRC*(+)
MLPPNLSSISFRWKMPAARAAEAFVFSKISEKC*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to drought stress

Functional Information
Coding potential	Y
Potential coding position	35780644-35775993(+) 35780732-35775993(+) 35775973-35780701(-)
Potential amino acid sequence	MVSDAVTIPVIASSGAGAVQHFSEIFEKTNASAALAAGIFHRKEILLKFGGSIRIFQVRC(+) MLLLPLLLAFSTGKRYYSSLEVASEYFRSGADKISIGSDAVYAAEAFLQTGVKTGKSSLEQISR VYGNQAVVVSIDPRRVYVKSQEDVPFKTVKVSTKGPSGEEYAWYQCTVNGGRDSRAIGAYELAK AVEELGAGEILLNCIDCDGQGCGFDIDLVKMVSDAVTIPVIASSGAGAVQHFSEIFEKTNASAA LAAGIFHRKEILLKFGGSIRIFQVRC(+) MLPPNLSSISFRWKMPAARAAEAFVFSKISEKC*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to drought stress

			
						 Other Information
					
						References
						Han et al., 2020;Zhang et al., 2019

circRNA

Detail information of Zm00001d028464_circ_g.2

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