Plant Circular RNA Database

Detail information of AT5G51450_circ_g.4

			
						 General Information
					
						CircRNA Name
						AT5G51450_circ_g.4
					
						ID in PlantcircBase
						ath_circ_043638
					
						Alias
						At_ciR1930
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr5: 20895191-20896915  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							AT5G51450						
					
						Parent gene annotation
						
							RPM1 interacting protein 3
							
						Parent gene strand
						+
					
						Alternative splicing
						
							AT5G51450_circ_g.2 AT5G51450_circ_g.3 AT5G51450_circ_g.5 AT5G51450_circ_g.6 						
					
						Support reads
						4
					
						Tissues
						leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT5G51450.1:6
AT5G51450.2:6

General Information
CircRNA Name	AT5G51450_circ_g.4
ID in PlantcircBase	ath_circ_043638
Alias	At_ciR1930
Organism	Arabidpsis thaliana
Position	chr5: 20895191-20896915 JBrowse»
Reference genome	TAIR10.38
Type	e-circRNA
Identification method	find_circ
Parent gene	AT5G51450
Parent gene annotation	RPM1 interacting protein 3
Parent gene strand	+
Alternative splicing	AT5G51450_circ_g.2 AT5G51450_circ_g.3 AT5G51450_circ_g.5 AT5G51450_circ_g.6
Support reads	4
Tissues	leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT5G51450.1:6 AT5G51450.2:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AACTGTCTCCCGTGCAGCAAATAACATGGCGAGTATACTAGCAATGGCCGAGACAGTAAGGGAA
GTCCTCCCACATGTGCCTGATGAAATAATTTTTCAGgcgttgttgattcacgggtttcaactgc
ttgatatgtggatcaaccacttagcagtcaagaattcagattgccagagatcaaagttttatga
ttccatga

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1056
Transcript exons: 20895191-20895296,20895424-20895581,20895690-20895827,20
895907-20895974,20896061-20896279,20896549-20896915
GCGTTGTTGATTCACGGGTTTCAACTGCTTGATATGTGGATCAACCACTTAGCAGTCAAGAATT
CAGATTGCCAGAGATCAAAGTTTTATGATTCCATGACAGCAGGCTCGTTATTGGAATGGAAAGG
CCTCCTCAACCGAAATCTTGGTTTCTTCCTAGACATGGCTACCTTGGTAATGGCCCTCGGTCAT
TATTTGCACATCTGGTGGCTCCATGGAATGGCCTTCCATCTGGTGGATGCAGTTTTGTTTCTCA
ACATACGTGCCTTGCTAAGTTCAATTTTGAAACGAATAAAAGGATACATCAAACTGAGAGTAGC
TTTAGGTGCTCTTCATGCAGCTCTTCTTGATGCAACTTCAGAAGAGCTACGGGATTATGATGAC
GAATGTGCTATATGTCGGGAACCAATGGCTAAGGCTAAAAGACTTCACTGCAACCACCTTTTTC
ATCTTGGCTGCCTACGATCATGGTTGGATCAAGGTTTAAATGAGGTTTACTCTTGTCCTACTTG
CCGTAAGCCTCTTTTTGTTGGTAGAACTGAAAGTGAGGCGAATCCTAGCAGAGGAGAAGTCTCA
AGCGATGAACACTTAGCCCGTCAATTTGAGAGACAAAACAATTCTGTGCATGCACTAACCACTG
GAATGTTTCCAACTGAGACGCCAAATTTCACCGAAAGTGATCCTTGGAGGAATTCAGAGGTGGA
TCCAAGCTGGCTGCAAACATGGTCAGATCAGGGTGTTGATGTTGTGGGTTCCTCTGCAGGCTCC
AGATCCGTTGGGCTGGGGCAGGTTCAATTGATGATGAGGCATCTTGCATCTGTAGGGGAAGGTT
CTGCTCAGACTACACTTGACGATGCTTCTTGGGGTCTCTGGCCAATGAATCCTTCGCAAGCATC
GACTTCATCTACATATGTTCCTCCTGGTGCTGGAGGAAGAACAGGTGGTCTGCATCTAAGAACT
GTCTCCCGTGCAGCAAATAACATGGCGAGTATACTAGCAATGGCCGAGACAGTAAGGGAAGTCC
TCCCACATGTGCCTGATGAAATAATTTTTCAG
Transcript length: 1110
Transcript exons: 20895191-20895296,20895424-20895581,20895690-20895827,20
895907-20895974,20896061-20896279,20896495-20896915
GCGTTGTTGATTCACGGGTTTCAACTGCTTGATATGTGGATCAACCACTTAGCAGTCAAGAATT
CAGATTGCCAGAGATCAAAGTTTTATGATTCCATGACAGCAGGCTCGTTATTGGAATGGAAAGG
CCTCCTCAACCGAAATCTTGGTTTCTTCCTAGACATGGCTACCTTGGTAATGGCCCTCGGTCAT
TATTTGCACATCTGGTGGCTCCATGGAATGGCCTTCCATCTGGTGGATGCAGTTTTGTTTCTCA
ACATACGTGCCTTGCTAAGTTCAATTTTGAAACGAATAAAAGGATACATCAAACTGAGAGTAGC
TTTAGGTGCTCTTCATGCAGCTCTTCTTGATGCAACTTCAGAAGAGCTACGGGATTATGATGAC
GAATGTGCTATATGTCGGGAACCAATGGCTAAGGCTAAAAGACTTCACTGCAACCACCTTTTTC
ATCTTGGCTGCCTACGATCATGGTTGGATCAAGGTTTAAATGAGGTTTACTCTTGTCCTACTTG
CCGTAAGCCTCTTTTTGTTGGTAGAACTGAAAGTGAGGCGAATCCTAGCAGAGGAGAAGTCTCA
AGCGATGAACACTTAGCCCGTCAATTTGAGAGACAAAACAATTCTGTGCATGCACTAACCACTG
GAATGTTTCCAACTGAGACGCCAAATTTCACCGAAAGTGATCCTTGGAGACTGGCTTTCTTAAA
CGGGATTAGCAGTTCTCACCTTTTTCTCATGCCATATAGGAATTCAGAGGTGGATCCAAGCTGG
CTGCAAACATGGTCAGATCAGGGTGTTGATGTTGTGGGTTCCTCTGCAGGCTCCAGATCCGTTG
GGCTGGGGCAGGTTCAATTGATGATGAGGCATCTTGCATCTGTAGGGGAAGGTTCTGCTCAGAC
TACACTTGACGATGCTTCTTGGGGTCTCTGGCCAATGAATCCTTCGCAAGCATCGACTTCATCT
ACATATGTTCCTCCTGGTGCTGGAGGAAGAACAGGTGGTCTGCATCTAAGAACTGTCTCCCGTG
CAGCAAATAACATGGCGAGTATACTAGCAATGGCCGAGACAGTAAGGGAAGTCCTCCCACATGT
GCCTGATGAAATAATTTTTCAG
						
					

						Genomic sequence
						
							GCGTTGTTGATTCACGGGTTTCAACTGCTTGATATGTGGATCAACCACTTAGCAGTCAAGAATT
CAGATTGCCAGAGATCAAAGTTTTATGATTCCATGACAGCAGGTTTTGTCTTTTTCTCGGCATA
TGATTGTAATTATGTTTTCTGTTAGACTGCAGGCGTGCATTATTTGAAATTTTTTGTCCTGTTT
GGTGTTCACATTACTAACTTGACCTCTTACCCATTGAATAGGCTCGTTATTGGAATGGAAAGGC
CTCCTCAACCGAAATCTTGGTTTCTTCCTAGACATGGCTACCTTGGTAATGGCCCTCGGTCATT
ATTTGCACATCTGGTGGCTCCATGGAATGGCCTTCCATCTGGTGGATGCAGTTTTGTTTCTCAA
CATACGTGTAAGTCTGTTAATTGACTTTCTTTGTAAAAGTGCCACTCTACTGGTTTCTTAATAG
GCACATACCTAATTGTTAAGTTCTTTGTGTGTTCCCGTTTGATTTTGACAGGCCTTGCTAAGTT
CAATTTTGAAACGAATAAAAGGATACATCAAACTGAGAGTAGCTTTAGGTGCTCTTCATGCAGC
TCTTCTTGATGCAACTTCAGAAGAGCTACGGGATTATGATGACGAATGTGCTATATGTCGGGTA
AGTTTCTGCTTGATAGTTATTGGTCTCCTTACTTTTTTTAGTAGCTCACTAATCTTGGAACCAT
TATGAATGATAGGAACCAATGGCTAAGGCTAAAAGACTTCACTGCAACCACCTTTTTCATCTTG
GCTGCCTACGATCATGGTATGCTAGCTCTGTTATGTTGGCAGCCTTGTGCTATTGCGGTTCTGT
GAGAACTGTAAATCATAATGATATTTTGACTCTGGCAGGTTGGATCAAGGTTTAAATGAGGTTT
ACTCTTGTCCTACTTGCCGTAAGCCTCTTTTTGTTGGTAGAACTGAAAGTGAGGCGAATCCTAG
CAGAGGAGAAGTCTCAAGCGATGAACACTTAGCCCGTCAATTTGAGAGACAAAACAATTCTGTG
CATGCACTAACCACTGGAATGTTTCCAACTGAGACGCCAAATTTCACCGAAAGTGATCCTTGGA
GGTTGGGTTCATTGTTCCATATGTTTTCTTCTTAAGTGCATTAAAGTAACAGTGTGTTCATAAC
AAGATCATCAACTTCCTGTGGTTTCCTATCCCTGAGCTAAAATACTATGCATTCTCTAATTTTG
TCTAATTATACTTGGTTCTTTTGGGTAGCAAGTAATTGTTGGTTTTGTGAGGACCAAGCTTGTG
CCCCCATTGATTTTCTTTTTAAAGACTGGCTTTCTTAAACGGGATTAGCAGTTCTCACCTTTTT
CTCATGCCATATAGGAATTCAGAGGTGGATCCAAGCTGGCTGCAAACATGGTCAGATCAGGGTG
TTGATGTTGTGGGTTCCTCTGCAGGCTCCAGATCCGTTGGGCTGGGGCAGGTTCAATTGATGAT
GAGGCATCTTGCATCTGTAGGGGAAGGTTCTGCTCAGACTACACTTGACGATGCTTCTTGGGGT
CTCTGGCCAATGAATCCTTCGCAAGCATCGACTTCATCTACATATGTTCCTCCTGGTGCTGGAG
GAAGAACAGGTGGTCTGCATCTAAGAACTGTCTCCCGTGCAGCAAATAACATGGCGAGTATACT
AGCAATGGCCGAGACAGTAAGGGAAGTCCTCCCACATGTGCCTGATGAAATAATTTTTCAG
						
					

			
		

Sequences
Splice junction sequence	AACTGTCTCCCGTGCAGCAAATAACATGGCGAGTATACTAGCAATGGCCGAGACAGTAAGGGAA GTCCTCCCACATGTGCCTGATGAAATAATTTTTCAGgcgttgttgattcacgggtttcaactgc ttgatatgtggatcaaccacttagcagtcaagaattcagattgccagagatcaaagttttatga ttccatga
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1056 Transcript exons: 20895191-20895296,20895424-20895581,20895690-20895827,20 895907-20895974,20896061-20896279,20896549-20896915 GCGTTGTTGATTCACGGGTTTCAACTGCTTGATATGTGGATCAACCACTTAGCAGTCAAGAATT CAGATTGCCAGAGATCAAAGTTTTATGATTCCATGACAGCAGGCTCGTTATTGGAATGGAAAGG CCTCCTCAACCGAAATCTTGGTTTCTTCCTAGACATGGCTACCTTGGTAATGGCCCTCGGTCAT TATTTGCACATCTGGTGGCTCCATGGAATGGCCTTCCATCTGGTGGATGCAGTTTTGTTTCTCA ACATACGTGCCTTGCTAAGTTCAATTTTGAAACGAATAAAAGGATACATCAAACTGAGAGTAGC TTTAGGTGCTCTTCATGCAGCTCTTCTTGATGCAACTTCAGAAGAGCTACGGGATTATGATGAC GAATGTGCTATATGTCGGGAACCAATGGCTAAGGCTAAAAGACTTCACTGCAACCACCTTTTTC ATCTTGGCTGCCTACGATCATGGTTGGATCAAGGTTTAAATGAGGTTTACTCTTGTCCTACTTG CCGTAAGCCTCTTTTTGTTGGTAGAACTGAAAGTGAGGCGAATCCTAGCAGAGGAGAAGTCTCA AGCGATGAACACTTAGCCCGTCAATTTGAGAGACAAAACAATTCTGTGCATGCACTAACCACTG GAATGTTTCCAACTGAGACGCCAAATTTCACCGAAAGTGATCCTTGGAGGAATTCAGAGGTGGA TCCAAGCTGGCTGCAAACATGGTCAGATCAGGGTGTTGATGTTGTGGGTTCCTCTGCAGGCTCC AGATCCGTTGGGCTGGGGCAGGTTCAATTGATGATGAGGCATCTTGCATCTGTAGGGGAAGGTT CTGCTCAGACTACACTTGACGATGCTTCTTGGGGTCTCTGGCCAATGAATCCTTCGCAAGCATC GACTTCATCTACATATGTTCCTCCTGGTGCTGGAGGAAGAACAGGTGGTCTGCATCTAAGAACT GTCTCCCGTGCAGCAAATAACATGGCGAGTATACTAGCAATGGCCGAGACAGTAAGGGAAGTCC TCCCACATGTGCCTGATGAAATAATTTTTCAG Transcript length: 1110 Transcript exons: 20895191-20895296,20895424-20895581,20895690-20895827,20 895907-20895974,20896061-20896279,20896495-20896915 GCGTTGTTGATTCACGGGTTTCAACTGCTTGATATGTGGATCAACCACTTAGCAGTCAAGAATT CAGATTGCCAGAGATCAAAGTTTTATGATTCCATGACAGCAGGCTCGTTATTGGAATGGAAAGG CCTCCTCAACCGAAATCTTGGTTTCTTCCTAGACATGGCTACCTTGGTAATGGCCCTCGGTCAT TATTTGCACATCTGGTGGCTCCATGGAATGGCCTTCCATCTGGTGGATGCAGTTTTGTTTCTCA ACATACGTGCCTTGCTAAGTTCAATTTTGAAACGAATAAAAGGATACATCAAACTGAGAGTAGC TTTAGGTGCTCTTCATGCAGCTCTTCTTGATGCAACTTCAGAAGAGCTACGGGATTATGATGAC GAATGTGCTATATGTCGGGAACCAATGGCTAAGGCTAAAAGACTTCACTGCAACCACCTTTTTC ATCTTGGCTGCCTACGATCATGGTTGGATCAAGGTTTAAATGAGGTTTACTCTTGTCCTACTTG CCGTAAGCCTCTTTTTGTTGGTAGAACTGAAAGTGAGGCGAATCCTAGCAGAGGAGAAGTCTCA AGCGATGAACACTTAGCCCGTCAATTTGAGAGACAAAACAATTCTGTGCATGCACTAACCACTG GAATGTTTCCAACTGAGACGCCAAATTTCACCGAAAGTGATCCTTGGAGACTGGCTTTCTTAAA CGGGATTAGCAGTTCTCACCTTTTTCTCATGCCATATAGGAATTCAGAGGTGGATCCAAGCTGG CTGCAAACATGGTCAGATCAGGGTGTTGATGTTGTGGGTTCCTCTGCAGGCTCCAGATCCGTTG GGCTGGGGCAGGTTCAATTGATGATGAGGCATCTTGCATCTGTAGGGGAAGGTTCTGCTCAGAC TACACTTGACGATGCTTCTTGGGGTCTCTGGCCAATGAATCCTTCGCAAGCATCGACTTCATCT ACATATGTTCCTCCTGGTGCTGGAGGAAGAACAGGTGGTCTGCATCTAAGAACTGTCTCCCGTG CAGCAAATAACATGGCGAGTATACTAGCAATGGCCGAGACAGTAAGGGAAGTCCTCCCACATGT GCCTGATGAAATAATTTTTCAG
Genomic sequence	GCGTTGTTGATTCACGGGTTTCAACTGCTTGATATGTGGATCAACCACTTAGCAGTCAAGAATT CAGATTGCCAGAGATCAAAGTTTTATGATTCCATGACAGCAGGTTTTGTCTTTTTCTCGGCATA TGATTGTAATTATGTTTTCTGTTAGACTGCAGGCGTGCATTATTTGAAATTTTTTGTCCTGTTT GGTGTTCACATTACTAACTTGACCTCTTACCCATTGAATAGGCTCGTTATTGGAATGGAAAGGC CTCCTCAACCGAAATCTTGGTTTCTTCCTAGACATGGCTACCTTGGTAATGGCCCTCGGTCATT ATTTGCACATCTGGTGGCTCCATGGAATGGCCTTCCATCTGGTGGATGCAGTTTTGTTTCTCAA CATACGTGTAAGTCTGTTAATTGACTTTCTTTGTAAAAGTGCCACTCTACTGGTTTCTTAATAG GCACATACCTAATTGTTAAGTTCTTTGTGTGTTCCCGTTTGATTTTGACAGGCCTTGCTAAGTT CAATTTTGAAACGAATAAAAGGATACATCAAACTGAGAGTAGCTTTAGGTGCTCTTCATGCAGC TCTTCTTGATGCAACTTCAGAAGAGCTACGGGATTATGATGACGAATGTGCTATATGTCGGGTA AGTTTCTGCTTGATAGTTATTGGTCTCCTTACTTTTTTTAGTAGCTCACTAATCTTGGAACCAT TATGAATGATAGGAACCAATGGCTAAGGCTAAAAGACTTCACTGCAACCACCTTTTTCATCTTG GCTGCCTACGATCATGGTATGCTAGCTCTGTTATGTTGGCAGCCTTGTGCTATTGCGGTTCTGT GAGAACTGTAAATCATAATGATATTTTGACTCTGGCAGGTTGGATCAAGGTTTAAATGAGGTTT ACTCTTGTCCTACTTGCCGTAAGCCTCTTTTTGTTGGTAGAACTGAAAGTGAGGCGAATCCTAG CAGAGGAGAAGTCTCAAGCGATGAACACTTAGCCCGTCAATTTGAGAGACAAAACAATTCTGTG CATGCACTAACCACTGGAATGTTTCCAACTGAGACGCCAAATTTCACCGAAAGTGATCCTTGGA GGTTGGGTTCATTGTTCCATATGTTTTCTTCTTAAGTGCATTAAAGTAACAGTGTGTTCATAAC AAGATCATCAACTTCCTGTGGTTTCCTATCCCTGAGCTAAAATACTATGCATTCTCTAATTTTG TCTAATTATACTTGGTTCTTTTGGGTAGCAAGTAATTGTTGGTTTTGTGAGGACCAAGCTTGTG CCCCCATTGATTTTCTTTTTAAAGACTGGCTTTCTTAAACGGGATTAGCAGTTCTCACCTTTTT CTCATGCCATATAGGAATTCAGAGGTGGATCCAAGCTGGCTGCAAACATGGTCAGATCAGGGTG TTGATGTTGTGGGTTCCTCTGCAGGCTCCAGATCCGTTGGGCTGGGGCAGGTTCAATTGATGAT GAGGCATCTTGCATCTGTAGGGGAAGGTTCTGCTCAGACTACACTTGACGATGCTTCTTGGGGT CTCTGGCCAATGAATCCTTCGCAAGCATCGACTTCATCTACATATGTTCCTCCTGGTGCTGGAG GAAGAACAGGTGGTCTGCATCTAAGAACTGTCTCCCGTGCAGCAAATAACATGGCGAGTATACT AGCAATGGCCGAGACAGTAAGGGAAGTCCTCCCACATGTGCCTGATGAAATAATTTTTCAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.19818532

Conservation Information
Conserved circRNAs	NA
PMCS	0.19818532

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							20895224-20896912(+)
						
					

						Potential amino acid sequence
						
							MWINHLAVKNSDCQRSKFYDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGMA
FHLVDAVLFLNIRALLSSILKRIKGYIKLRVALGALHAALLDATSEELRDYDDECAICREPMAK
AKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCRKPLFVGRTESEANPSRGEVSSDEHLARQFER
QNNSVHALTTGMFPTETPNFTESDPWRLAFLNGISSSHLFLMPYRNSEVDPSWLQTWSDQGVDV
VGSSAGSRSVGLGQVQLMMRHLASVGEGSAQTTLDDASWGLWPMNPSQASTSSTYVPPGAGGRT
GGLHLRTVSRAANNMASILAMAETVREVLPHVPDEIIFQALLIHGFQLLDMWINHLAVKNSDCQ
RSKFYDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGMAFHLVDAVLFLNIRA
LLSSILKRIKGYIKLRVALGALHAALLDATSEELRDYDDECAICREPMAKAKRLHCNHLFHLGC
LRSWLDQGLNEVYSCPTCRKPLFVGRTESEANPSRGEVSSDEHLARQFERQNNSVHALTTGMFP
TETPNFTESDPWRLAFLNGISSSHLFLMPYRNSEVDPSWLQTWSDQGVDVVGSSAGSRSVGLGQ
VQLMMRHLASVGEGSAQTTLDDASWGLWPMNPSQASTSSTYVPPGAGGRTGGLHLRTVSRAANN
MASILAMAETVREVLPHVPDEIIFQALLIHGFQLLDMWINHLAVKNSDCQRSKFYDSMTAGSLL
EWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGMAFHLVDAVLFLNIRALLSSILKRIKGYIK
LRVALGALHAALLDATSEELRDYDDECAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNEVYS
CPTCRKPLFVGRTESEANPSRGEVSSDEHLARQFERQNNSVHALTTGMFPTETPNFTESDPWRL
AFLNGISSSHLFLMPYRNSEVDPSWLQTWSDQGVDVVGSSAGSRSVGLGQVQLMMRHLASVGEG
SAQTTLDDASWGLWPMNPSQASTSSTYVPPGAGGRTGGLHLRTVSRAANNMASILAMAETVREV
LPHVPDEIIFQALLIHGFQLLDMWINHLAVKNSDCQRSKFYDSMTAGSLLEWKGLLNRNLGFFL
DMATLVMALGHYLHIWWLHGMAFHLVDAVLFLNIRALLSSILKRIKGYIKLRVALGALHAALLD
ATSEELRDYDDECAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCRKPLFVGRTE
SEANPSRGEVSSDEHLARQFERQNNSVHALTTGMFPTETPNFTESDPWRLAFLNGISSSHLFLM
PYRNSEVDPSWLQTWSDQGVDVVGSSAGSRSVGLGQVQLMMRHLASVGEGSAQTTLDDASWGLW
PMNPSQASTSSTYVPPGAGGRTGGLHLRTVSRAANNMASILAMAETVREVLPHVPDEIIFQ(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	20895224-20896912(+)
Potential amino acid sequence	MWINHLAVKNSDCQRSKFYDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGMA FHLVDAVLFLNIRALLSSILKRIKGYIKLRVALGALHAALLDATSEELRDYDDECAICREPMAK AKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCRKPLFVGRTESEANPSRGEVSSDEHLARQFER QNNSVHALTTGMFPTETPNFTESDPWRLAFLNGISSSHLFLMPYRNSEVDPSWLQTWSDQGVDV VGSSAGSRSVGLGQVQLMMRHLASVGEGSAQTTLDDASWGLWPMNPSQASTSSTYVPPGAGGRT GGLHLRTVSRAANNMASILAMAETVREVLPHVPDEIIFQALLIHGFQLLDMWINHLAVKNSDCQ RSKFYDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGMAFHLVDAVLFLNIRA LLSSILKRIKGYIKLRVALGALHAALLDATSEELRDYDDECAICREPMAKAKRLHCNHLFHLGC LRSWLDQGLNEVYSCPTCRKPLFVGRTESEANPSRGEVSSDEHLARQFERQNNSVHALTTGMFP TETPNFTESDPWRLAFLNGISSSHLFLMPYRNSEVDPSWLQTWSDQGVDVVGSSAGSRSVGLGQ VQLMMRHLASVGEGSAQTTLDDASWGLWPMNPSQASTSSTYVPPGAGGRTGGLHLRTVSRAANN MASILAMAETVREVLPHVPDEIIFQALLIHGFQLLDMWINHLAVKNSDCQRSKFYDSMTAGSLL EWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGMAFHLVDAVLFLNIRALLSSILKRIKGYIK LRVALGALHAALLDATSEELRDYDDECAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNEVYS CPTCRKPLFVGRTESEANPSRGEVSSDEHLARQFERQNNSVHALTTGMFPTETPNFTESDPWRL AFLNGISSSHLFLMPYRNSEVDPSWLQTWSDQGVDVVGSSAGSRSVGLGQVQLMMRHLASVGEG SAQTTLDDASWGLWPMNPSQASTSSTYVPPGAGGRTGGLHLRTVSRAANNMASILAMAETVREV LPHVPDEIIFQALLIHGFQLLDMWINHLAVKNSDCQRSKFYDSMTAGSLLEWKGLLNRNLGFFL DMATLVMALGHYLHIWWLHGMAFHLVDAVLFLNIRALLSSILKRIKGYIKLRVALGALHAALLD ATSEELRDYDDECAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCRKPLFVGRTE SEANPSRGEVSSDEHLARQFERQNNSVHALTTGMFPTETPNFTESDPWRLAFLNGISSSHLFLM PYRNSEVDPSWLQTWSDQGVDVVGSSAGSRSVGLGQVQLMMRHLASVGEGSAQTTLDDASWGLW PMNPSQASTSSTYVPPGAGGRTGGLHLRTVSRAANNMASILAMAETVREVLPHVPDEIIFQ(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015

circRNA

Detail information of AT5G51450_circ_g.4

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