Plant Circular RNA Database

Detail information of Os11g0446500_circ_g.3

			
						 General Information
					
						CircRNA Name
						Os11g0446500_circ_g.3
					
						ID in PlantcircBase
						osa_circ_009275
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr11: 14835190-14839251  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os11g0446500						
					
						Parent gene annotation
						
							Similar to Phospholipid-translocating P-type ATPase, flippase fa
mily protein, expressed. (Os11t0446500-00)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os11g0446500_circ_g.1 Os11g0446500_circ_g.2 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os11t0446500-00:9

General Information
CircRNA Name	Os11g0446500_circ_g.3
ID in PlantcircBase	osa_circ_009275
Alias	NA
Organism	Oryza sativa
Position	chr11: 14835190-14839251 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os11g0446500
Parent gene annotation	Similar to Phospholipid-translocating P-type ATPase, flippase fa mily protein, expressed. (Os11t0446500-00)
Parent gene strand	+
Alternative splicing	Os11g0446500_circ_g.1 Os11g0446500_circ_g.2
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os11t0446500-00:9

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GGGAATGATGTCAGGATGATACAACAGGCTGATATTGGTGTAGGAATTAGTGGCAGAGAAGGTC
TTCAAGCAGCAAGGGCTGCTGACTATAGCGTTGGCAatgtcgaactcctcaatgctgttgccaa
taattctcatgtcatcaagtttttgactgtcatgaccctttgcaatactgtcattcctataaaa
aggttata

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							ATGTCGAACTCCTCAATGCTGTTGCCAATAATTCTCATGTCATCAAGTTTTTGACTGTCATGAC
CCTTTGCAATACTGTCATTCCTATAAAAAGGTTATATTTTCATCTGTTTCTCAATTACTCTTGG
CACATATTTATTTCTTTCACCTTAACATTGCCAATTTTGTTGTTAAAAAACAGTTCTAGCGGAG
CAATTTTATATAAAGCTCAGTCCCAGGATGAGGATGCTCTTGTTAATGCAGCCTCTAATTTGCA
TATGGTGCTTGTCAACAAAAATGGAAACACTGCTGGTAGGTTTATTACATTTTACCTGTCTCGT
TTTTTCATCTATTTTCCTTTTCTTGTTCATGTTGTCTTGACAAAATAATAAGACATGTATTTAA
GCAGAAATTCACTTCAACAGACGGGTGGTTCAATATGAGATACTTGACATTCTAGAGTTTACAT
CTGATCGAAAAAGAATGTCTGTCGTAGTATTGGATTGTGAAAGTGGAAAGATTTTTCTCTTATC
CAAAGGTGCAGATGAAGCAATTATTCCATGTGCTTATTCTGGTAATCATAATATGCTGAATATC
TATTTTCATTCATTTTTTTTGAACTGTAATATTTTAAACATTGGTGTTTTTATTCACTTGTTTG
CTCTTTATTTCATGTGACAACTTATAGTTCCTGCTGCGAACTAATTGTAGTATCTGTTCTGTTT
TGATCCTTGACCTTTGTAAGAACAGCACATAAGAAATAAAAAACAAGTTCTTAGATTCTGTTCA
ACCAATTGAGAGCTTGTGTTGGTTTTCAGGTTGATGTTTCTATTATTTTTCAGGACAGCGGATA
AAGACATTTGTTGATGCAGTCGACAAATATGCTCAACTGGGATTACGGACACTCTGTTTGGGAT
GGCGTGAACTGGAATCGGAGGAGTACCTAGAATGGTCTCGATCATTCAAGGAAGCCAACAGTGC
ATTAATTGATAGGGAGGTAAGTATCGTGTTGATTTCTTTTATTAGATATATGCCTAATGCCATG
AAACTAATGTTGCAACATTGGTTCCGATCAGTGGAAAGTTGCTGAGGTGTGCCAGAAACTAGAG
CACAGCTTAGAGATTCTTGGTGTCAGTGCTATAGAGGACCGCCTCCAGGTTTTATCTTCGCCTT
GATTTCTAGTCAAAGTTTCTTTCATCATTTTATATTCCTTTCTCATGAATCTGTTGATCTGTTT
AGGCTGGTGTACCAGAAACTATTGAAATACTGAGGCAGTCAGGAATAAACTTTTGGATGTTAAC
TGGCGATAAACAAAGCACTGCTATTCAAATCGCGCTTTTGTGCAATCTCATTTCTTCAGGTGAC
AATCTTCTCACTGAACATGTTTCACTAAAAGATTCCACTATTTTTTTTTACTCATGTTATTAGT
ATTTATGTTAGTGTTCCACCAATGATAGTGGGTAGAATTGCCAACTTGATGCCCTTCCACTAGG
TAGAATGGTCAGGAACACTGTTCACACAGATGAACAGTATCCCTCGGTACTGTAGGTTAGAATT
TGTTAGATAATATATTAGAGTTAAGATTAGATTGAGTTGTTGCCTATTTTGATAATTTTAAAAA
TAAGTTTAAGGGTTGAGGTATCCATTTATGTAAGGATGGGGTTTTATTTCCTTTCCTGAAGCAA
GCAAAGGCAGATTGAAAAGTTCATAGTCCCTAAACTCTAGGGTTTGTCTCTCCCAAGACCAGCT
GTAGATCTATTTCCCCCACCTATCGGTGCTGTCCTTCGTCTAGCATGTTCTTAATTCATTGCTG
TCTGACCTTCCTGCAACAGATATTTACCCCATGATGCCATAGGGAACCAAGGATCATCACATTT
CACTTATAAACAATGTTCCTGCCCATGAAAAATTATCTATGCCTAGAAATGTTCCAGTCAGTAA
CTGTTTTGTTCAAGTCCTTTTATTACTTCCAACTGTGATATTTTTAAAACTTTTCTCGAACTTA
ACCCAAGATTTGCATCAATCCTTCTCAAGTAAATTATAATCCTGAATAAGCTTTAAGTAATGAA
ATAGGTGTTCAATTGCTTGAATCCCAGGTAGGTTGACCTCAATTTTTTTAAAAAAGGGGCTGTG
TAGGGTGACTTCATTAAGGTGTTGAATGACTTCTATTTTCCATATGTAGAGCCCAAGGGGCAAC
TCTTGTATATCAATGGAAGAACTGTGGATGAAGTTGCTAGAAGCTTGGAAAGAGTTCTACTTAC
TATGCGGATAACTACTTCTGAACCTAAGGTTAGTTTAAATGTTGTGTATTAAGACGACTGTGCA
TTTTGTATCCAGTGATGTAATATTTGCATGGAACAGGAGCTAGCTTTTGTTGTGGATGGTTGGG
CTCTTGAAATCATCCTGTCACGCTACAATGAAGCCTTTACTGAATTAGCAGCTCTTTCAAAAAC
AGCAATATGCTGCCGGGTTACACCGTCTCAGAAAGCACAGGTAAATTCAGTGGCATTGGTTTGC
TCATGTTTGCTGGAGCCAAATATATTCATTAGTCATTACTCCCTCCATTCTAAAATATGAAGCA
TATTAGCTTTTTACATGGTCTGCAATGGTGTACTTTGACCATTTATTTATTTTATAATATATTA
TCAGTAACTATGAAATTAACATCATATAAAAATACTAATTTCAAATACGAATATAATGATACTA
CATGCATGACACTAAACACACATATTATTAGTCAAAAGTTTTCATATGTTGACTTTTCTAAAAG
CAAGGATGCCTTATATTTTAGAACAGAGGGAGTACTATCTTTATTTTTACTGTTAAATTTGATA
GCTCAAAGAAACATTGCAGTAAGTATGACATGCCCTTTTTTTTTTTTTGAGGAAGCAGTCCATT
TAGCCTCCACAGTGCAGTTCACTCTCTTGATCTCCTCTGATTAGTGTTCGCTTGCACGGCCTAA
TAGCTAGTTGGCGGCAAGATGTCCTGTTTACACCCTAGTCAGTGGATTAGTCGTTTCGCTGCCT
AAATGGTCCTAGTCGGTCCTAGGTGACCTGTATGGGATGACGTTGTGTGTATTTGGACAGTGGA
GGGGAGCGTTTACGCGGTGACATGGCGATAGGTTGTGACCAAAGCTTGGGCGTGATGCACGGCA
ACAAAAAAGGGAAGCACAGGGCTAGCTGCATTATAGAATGGAAGGGTATTAGGTTCTTACCTGC
GTGCGAGCCATTCTATAGCACCATTACGCTCTTCCCCTCTCAGCTCGAAGCAAGAGGGGAATGC
ATAAAAGCTCCCCTCCGTGGGTATACCAAGTCATACATTGCTATTTTTGGTCAATATTGTGTAT
TTCTATGGAAAAAGTAGAAAAAACGCCTAGACCGCCTAATCTGCCCAATTGCCACCTAATCAGC
CTACTCTACTCAGTGGGTACCTGCCCGACTAGCGACTATCGTCTAGGTGAACACTAGTAGCCCA
AATTTTGTCCTGAACTCCTGGAACCTGAGAAAATATCACCCTCCCCACAAAACCACCACTTTTT
ACTTATGATGCAGTATACTGTTTTCCTAAATAATATGGCATTCCAATTATCTGTACATGTTAAA
TAAGAGAGAGTATGCAGAGGCAGAGGAAGTTCTGTATCTCATTTTTTATTTACTCTTAGGAAGG
GAGAAAGGGGCTTCGAGTTTGCAATCTCAATCATCAGATTCTTGTTTTCGACTTGTGCACAGCT
ATGTCATGTATTTAAATTTAAAACTATTTCATGTTTTTAGAAAACCGACCAACATCTATTAGCT
TATACGTATGCAAGAAACTGACCTGTCCATGATATCCATCAGTAATCTACCTGGGCCCTAGTTT
TAGTAAACATTGTGTAATTGATGGATTTCTATTTCCCAGTGCTTATGTTGTCGTAATTCATTTT
GTAGCTTGTAAAGCTTCTAAAATCATGTGACTATCGAACTTTGGCTATTGGAGATGGTGGGAAT
GATGTCAGGATGATACAACAGGCTGATATTGGTGTAGGAATTAGTGGCAGAGAAGGTCTTCAAG
CAGCAAGGGCTGCTGACTATAGCGTTGGCA
						
					

			
		

Sequences
Splice junction sequence	GGGAATGATGTCAGGATGATACAACAGGCTGATATTGGTGTAGGAATTAGTGGCAGAGAAGGTC TTCAAGCAGCAAGGGCTGCTGACTATAGCGTTGGCAatgtcgaactcctcaatgctgttgccaa taattctcatgtcatcaagtttttgactgtcatgaccctttgcaatactgtcattcctataaaa aggttata
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	ATGTCGAACTCCTCAATGCTGTTGCCAATAATTCTCATGTCATCAAGTTTTTGACTGTCATGAC CCTTTGCAATACTGTCATTCCTATAAAAAGGTTATATTTTCATCTGTTTCTCAATTACTCTTGG CACATATTTATTTCTTTCACCTTAACATTGCCAATTTTGTTGTTAAAAAACAGTTCTAGCGGAG CAATTTTATATAAAGCTCAGTCCCAGGATGAGGATGCTCTTGTTAATGCAGCCTCTAATTTGCA TATGGTGCTTGTCAACAAAAATGGAAACACTGCTGGTAGGTTTATTACATTTTACCTGTCTCGT TTTTTCATCTATTTTCCTTTTCTTGTTCATGTTGTCTTGACAAAATAATAAGACATGTATTTAA GCAGAAATTCACTTCAACAGACGGGTGGTTCAATATGAGATACTTGACATTCTAGAGTTTACAT CTGATCGAAAAAGAATGTCTGTCGTAGTATTGGATTGTGAAAGTGGAAAGATTTTTCTCTTATC CAAAGGTGCAGATGAAGCAATTATTCCATGTGCTTATTCTGGTAATCATAATATGCTGAATATC TATTTTCATTCATTTTTTTTGAACTGTAATATTTTAAACATTGGTGTTTTTATTCACTTGTTTG CTCTTTATTTCATGTGACAACTTATAGTTCCTGCTGCGAACTAATTGTAGTATCTGTTCTGTTT TGATCCTTGACCTTTGTAAGAACAGCACATAAGAAATAAAAAACAAGTTCTTAGATTCTGTTCA ACCAATTGAGAGCTTGTGTTGGTTTTCAGGTTGATGTTTCTATTATTTTTCAGGACAGCGGATA AAGACATTTGTTGATGCAGTCGACAAATATGCTCAACTGGGATTACGGACACTCTGTTTGGGAT GGCGTGAACTGGAATCGGAGGAGTACCTAGAATGGTCTCGATCATTCAAGGAAGCCAACAGTGC ATTAATTGATAGGGAGGTAAGTATCGTGTTGATTTCTTTTATTAGATATATGCCTAATGCCATG AAACTAATGTTGCAACATTGGTTCCGATCAGTGGAAAGTTGCTGAGGTGTGCCAGAAACTAGAG CACAGCTTAGAGATTCTTGGTGTCAGTGCTATAGAGGACCGCCTCCAGGTTTTATCTTCGCCTT GATTTCTAGTCAAAGTTTCTTTCATCATTTTATATTCCTTTCTCATGAATCTGTTGATCTGTTT AGGCTGGTGTACCAGAAACTATTGAAATACTGAGGCAGTCAGGAATAAACTTTTGGATGTTAAC TGGCGATAAACAAAGCACTGCTATTCAAATCGCGCTTTTGTGCAATCTCATTTCTTCAGGTGAC AATCTTCTCACTGAACATGTTTCACTAAAAGATTCCACTATTTTTTTTTACTCATGTTATTAGT ATTTATGTTAGTGTTCCACCAATGATAGTGGGTAGAATTGCCAACTTGATGCCCTTCCACTAGG TAGAATGGTCAGGAACACTGTTCACACAGATGAACAGTATCCCTCGGTACTGTAGGTTAGAATT TGTTAGATAATATATTAGAGTTAAGATTAGATTGAGTTGTTGCCTATTTTGATAATTTTAAAAA TAAGTTTAAGGGTTGAGGTATCCATTTATGTAAGGATGGGGTTTTATTTCCTTTCCTGAAGCAA GCAAAGGCAGATTGAAAAGTTCATAGTCCCTAAACTCTAGGGTTTGTCTCTCCCAAGACCAGCT GTAGATCTATTTCCCCCACCTATCGGTGCTGTCCTTCGTCTAGCATGTTCTTAATTCATTGCTG TCTGACCTTCCTGCAACAGATATTTACCCCATGATGCCATAGGGAACCAAGGATCATCACATTT CACTTATAAACAATGTTCCTGCCCATGAAAAATTATCTATGCCTAGAAATGTTCCAGTCAGTAA CTGTTTTGTTCAAGTCCTTTTATTACTTCCAACTGTGATATTTTTAAAACTTTTCTCGAACTTA ACCCAAGATTTGCATCAATCCTTCTCAAGTAAATTATAATCCTGAATAAGCTTTAAGTAATGAA ATAGGTGTTCAATTGCTTGAATCCCAGGTAGGTTGACCTCAATTTTTTTAAAAAAGGGGCTGTG TAGGGTGACTTCATTAAGGTGTTGAATGACTTCTATTTTCCATATGTAGAGCCCAAGGGGCAAC TCTTGTATATCAATGGAAGAACTGTGGATGAAGTTGCTAGAAGCTTGGAAAGAGTTCTACTTAC TATGCGGATAACTACTTCTGAACCTAAGGTTAGTTTAAATGTTGTGTATTAAGACGACTGTGCA TTTTGTATCCAGTGATGTAATATTTGCATGGAACAGGAGCTAGCTTTTGTTGTGGATGGTTGGG CTCTTGAAATCATCCTGTCACGCTACAATGAAGCCTTTACTGAATTAGCAGCTCTTTCAAAAAC AGCAATATGCTGCCGGGTTACACCGTCTCAGAAAGCACAGGTAAATTCAGTGGCATTGGTTTGC TCATGTTTGCTGGAGCCAAATATATTCATTAGTCATTACTCCCTCCATTCTAAAATATGAAGCA TATTAGCTTTTTACATGGTCTGCAATGGTGTACTTTGACCATTTATTTATTTTATAATATATTA TCAGTAACTATGAAATTAACATCATATAAAAATACTAATTTCAAATACGAATATAATGATACTA CATGCATGACACTAAACACACATATTATTAGTCAAAAGTTTTCATATGTTGACTTTTCTAAAAG CAAGGATGCCTTATATTTTAGAACAGAGGGAGTACTATCTTTATTTTTACTGTTAAATTTGATA GCTCAAAGAAACATTGCAGTAAGTATGACATGCCCTTTTTTTTTTTTTGAGGAAGCAGTCCATT TAGCCTCCACAGTGCAGTTCACTCTCTTGATCTCCTCTGATTAGTGTTCGCTTGCACGGCCTAA TAGCTAGTTGGCGGCAAGATGTCCTGTTTACACCCTAGTCAGTGGATTAGTCGTTTCGCTGCCT AAATGGTCCTAGTCGGTCCTAGGTGACCTGTATGGGATGACGTTGTGTGTATTTGGACAGTGGA GGGGAGCGTTTACGCGGTGACATGGCGATAGGTTGTGACCAAAGCTTGGGCGTGATGCACGGCA ACAAAAAAGGGAAGCACAGGGCTAGCTGCATTATAGAATGGAAGGGTATTAGGTTCTTACCTGC GTGCGAGCCATTCTATAGCACCATTACGCTCTTCCCCTCTCAGCTCGAAGCAAGAGGGGAATGC ATAAAAGCTCCCCTCCGTGGGTATACCAAGTCATACATTGCTATTTTTGGTCAATATTGTGTAT TTCTATGGAAAAAGTAGAAAAAACGCCTAGACCGCCTAATCTGCCCAATTGCCACCTAATCAGC CTACTCTACTCAGTGGGTACCTGCCCGACTAGCGACTATCGTCTAGGTGAACACTAGTAGCCCA AATTTTGTCCTGAACTCCTGGAACCTGAGAAAATATCACCCTCCCCACAAAACCACCACTTTTT ACTTATGATGCAGTATACTGTTTTCCTAAATAATATGGCATTCCAATTATCTGTACATGTTAAA TAAGAGAGAGTATGCAGAGGCAGAGGAAGTTCTGTATCTCATTTTTTATTTACTCTTAGGAAGG GAGAAAGGGGCTTCGAGTTTGCAATCTCAATCATCAGATTCTTGTTTTCGACTTGTGCACAGCT ATGTCATGTATTTAAATTTAAAACTATTTCATGTTTTTAGAAAACCGACCAACATCTATTAGCT TATACGTATGCAAGAAACTGACCTGTCCATGATATCCATCAGTAATCTACCTGGGCCCTAGTTT TAGTAAACATTGTGTAATTGATGGATTTCTATTTCCCAGTGCTTATGTTGTCGTAATTCATTTT GTAGCTTGTAAAGCTTCTAAAATCATGTGACTATCGAACTTTGGCTATTGGAGATGGTGGGAAT GATGTCAGGATGATACAACAGGCTGATATTGGTGTAGGAATTAGTGGCAGAGAAGGTCTTCAAG CAGCAAGGGCTGCTGACTATAGCGTTGGCA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.120051163

Conservation Information
Conserved circRNAs	NA
PMCS	0.120051163

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							14835250-14839248(+)
14835229-14839118(-)
						
					

						Potential amino acid sequence
						
							MTLCNTVIPIKSSSGAILYKAQSQDEDALVNAASNLHMVLVNKNGNTAEIHFNRRVVQYEILDI
LEFTSDRKRMSVVVLDCESGKIFLLSKGADEAIIPCAYSGQRIKTFVDAVDKYAQLGLRTLCLG
WRELESEEYLEWSRSFKEANSALIDREWKVAEVCQKLEHSLEILGVSAIEDRLQAGVPETIEIL
RQSGINFWMLTGDKQSTAIQIALLCNLISSEPKGQLLYINGRTVDEVARSLERVLLTMRITTSE
PKELAFVVDGWALEIILSRYNEAFTELAALSKTAICCRVTPSQKAQLVKLLKSCDYRTLAIGDG
GNDVRMIQQADIGVGISGREGLQAARAADYSVGNVELLNAVANNSHVIKFLTVMTLCNTVIPIK
SSSGAILYKAQSQDEDALVNAASNLHMVLVNKNGNTAEIHFNRRVVQYEILDILEFTSDRKRMS
VVVLDCESGKIFLLSKGADEAIIPCAYSGQRIKTFVDAVDKYAQLGLRTLCLGWRELESEEYLE
WSRSFKEANSALIDREWKVAEVCQKLEHSLEILGVSAIEDRLQAGVPETIEILRQSGINFWMLT
GDKQSTAIQIALLCNLISSEPKGQLLYINGRTVDEVARSLERVLLTMRITTSEPKELAFVVDGW
ALEIILSRYNEAFTELAALSKTAICCRVTPSQKAQLVKLLKSCDYRTLAIGDGGNDVRMIQQAD
IGVGISGREGLQAARAADYSVGNVELLNAVANNSHVIKFLTVMTLCNTVIPIKSSSGAILYKAQ
SQDEDALVNAASNLHMVLVNKNGNTAEIHFNRRVVQYEILDILEFTSDRKRMSVVVLDCESGKI
FLLSKGADEAIIPCAYSGQRIKTFVDAVDKYAQLGLRTLCLGWRELESEEYLEWSRSFKEANSA
LIDREWKVAEVCQKLEHSLEILGVSAIEDRLQAGVPETIEILRQSGINFWMLTGDKQSTAIQIA
LLCNLISSEPKGQLLYINGRTVDEVARSLERVLLTMRITTSEPKELAFVVDGWALEIILSRYNE
AFTELAALSKTAICCRVTPSQKAQLVKLLKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGL
QAARAADYSVGNVELLNAVANNSHVIKFLTVMTLCNTVIPIKSSSGAILYKAQSQDEDALVNAA
SNLHMVLVNKNGNTAEIHFNRRVVQYEILDILEFTSDRKRMSVVVLDCESGKIFLLSKGADEAI
IPCAYSGQRIKTFVDAVDKYAQLGLRTLCLGWRELESEEYLEWSRSFKEANSALIDREWKVAEV
CQKLEHSLEILGVSAIEDRLQAGVPETIEILRQSGINFWMLTGDKQSTAIQIALLCNLISSEPK
GQLLYINGRTVDEVARSLERVLLTMRITTSEPKELAFVVDGWALEIILSRYNEAFTELAALSKT
AICCRVTPSQKAQLVKLLKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSVG
(+)
MRIIGNSIEEFDIANAIVSSPCCLKTFSATNSYTNISLLYHPDIIPTISNSQSSIVT*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	14835250-14839248(+) 14835229-14839118(-)
Potential amino acid sequence	MTLCNTVIPIKSSSGAILYKAQSQDEDALVNAASNLHMVLVNKNGNTAEIHFNRRVVQYEILDI LEFTSDRKRMSVVVLDCESGKIFLLSKGADEAIIPCAYSGQRIKTFVDAVDKYAQLGLRTLCLG WRELESEEYLEWSRSFKEANSALIDREWKVAEVCQKLEHSLEILGVSAIEDRLQAGVPETIEIL RQSGINFWMLTGDKQSTAIQIALLCNLISSEPKGQLLYINGRTVDEVARSLERVLLTMRITTSE PKELAFVVDGWALEIILSRYNEAFTELAALSKTAICCRVTPSQKAQLVKLLKSCDYRTLAIGDG GNDVRMIQQADIGVGISGREGLQAARAADYSVGNVELLNAVANNSHVIKFLTVMTLCNTVIPIK SSSGAILYKAQSQDEDALVNAASNLHMVLVNKNGNTAEIHFNRRVVQYEILDILEFTSDRKRMS VVVLDCESGKIFLLSKGADEAIIPCAYSGQRIKTFVDAVDKYAQLGLRTLCLGWRELESEEYLE WSRSFKEANSALIDREWKVAEVCQKLEHSLEILGVSAIEDRLQAGVPETIEILRQSGINFWMLT GDKQSTAIQIALLCNLISSEPKGQLLYINGRTVDEVARSLERVLLTMRITTSEPKELAFVVDGW ALEIILSRYNEAFTELAALSKTAICCRVTPSQKAQLVKLLKSCDYRTLAIGDGGNDVRMIQQAD IGVGISGREGLQAARAADYSVGNVELLNAVANNSHVIKFLTVMTLCNTVIPIKSSSGAILYKAQ SQDEDALVNAASNLHMVLVNKNGNTAEIHFNRRVVQYEILDILEFTSDRKRMSVVVLDCESGKI FLLSKGADEAIIPCAYSGQRIKTFVDAVDKYAQLGLRTLCLGWRELESEEYLEWSRSFKEANSA LIDREWKVAEVCQKLEHSLEILGVSAIEDRLQAGVPETIEILRQSGINFWMLTGDKQSTAIQIA LLCNLISSEPKGQLLYINGRTVDEVARSLERVLLTMRITTSEPKELAFVVDGWALEIILSRYNE AFTELAALSKTAICCRVTPSQKAQLVKLLKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGL QAARAADYSVGNVELLNAVANNSHVIKFLTVMTLCNTVIPIKSSSGAILYKAQSQDEDALVNAA SNLHMVLVNKNGNTAEIHFNRRVVQYEILDILEFTSDRKRMSVVVLDCESGKIFLLSKGADEAI IPCAYSGQRIKTFVDAVDKYAQLGLRTLCLGWRELESEEYLEWSRSFKEANSALIDREWKVAEV CQKLEHSLEILGVSAIEDRLQAGVPETIEILRQSGINFWMLTGDKQSTAIQIALLCNLISSEPK GQLLYINGRTVDEVARSLERVLLTMRITTSEPKELAFVVDGWALEIILSRYNEAFTELAALSKT AICCRVTPSQKAQLVKLLKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSVG (+) MRIIGNSIEEFDIANAIVSSPCCLKTFSATNSYTNISLLYHPDIIPTISNSQSSIVT*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os11g0446500_circ_g.3

Address

Any questions?

Supported by