Splice junction sequence |
CCTTTCCGTAGTTTTTGCATGGTCTTCTTGAGTTTGTTGAACTCTTGATGTCTCCTTCTCATTT AGTTTCTTCCACAACTCTACAGCTTCAGCATCTATTttggttctcttttccttctgttcattat atgatgactgaagctgccacgtatcctcaaggaaattgatccaagtcttgactacgccagcctc cacattac
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 681 Transcript exons: 2973830-2973960,2974093-2974200,2974577-2974642,2974990- 2975056,2975741-2975816,2976399-2976510,2976889-2977009 TTGGTTCTCTTTTCCTTCTGTTCATTATATGATGACTGAAGCTGCCACGTATCCTCAAGGAAAT TGATCCAAGTCTTGACTACGCCAGCCTCCACATTACATGAGGTAATAGATTTTGAAAGTTCATT ATCCTTCGCTTTTAAACTAAATATCATTTGATTGTTTGCTTCATCAAATTGATCCCTCTCTTCC CTTGTTTGCTTGAGACGTCCAATGGCAGCATTCAGTGAAATGTTGACCTTCTTCAACCGAGCCT CAAGTTCGTCACGTTGCTTCTCCAATTCAGAAATCTCAGCCGTCAACTCCTTTTCAACTGCACT CACTTCATTCTCCTTTTTAGCACGGAAGTTAAGAGCCTCTTCTTTCTGGCGCCTGTGATCCAAA ATACGCTTCTCAGCCTTGGAAGATGAATTAGAGAGGGAAGTTGCTAAGACCTTTAATTTGTCAA CCTTTTGGGAACGAATCTCAAGGGAGTCTCCGGCAGTAGATGTTTTTTTCTTCAGTAAAAGCTC TTCCATTCTAGAGCAGAATCGGACTTCAGAGAGTGCTTCTTTGAATGACTCAACAGTTGTAGCA GAAGTCCTTTCCGTAGTTTTTGCATGGTCTTCTTGAGTTTGTTGAACTCTTGATGTCTCCTTCT CATTTAGTTTCTTCCACAACTCTACAGCTTCAGCATCTATT
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Genomic sequence |
TTGGTTCTCTTTTCCTTCTGTTCATTATATGATGACTGAAGCTGCCACGTATCCTCAAGGAAAT TGATCCAAGTCTTGACTACGCCAGCCTCCACATTACATGAGGTAATAGATTTTGAAAGTTCATT ATCCTGATTGATGCCAGGGAAGAGAACAAAATATTAAGTTGATCAATATTTTGATAACAAACAG CACTAATCAATTGCAAGAAATATAACTGAAAAAAAAAATTGAAACCAGATCAACAAATAAAGTA TCAGCACCTTCGCTTTTAAACTAAATATCATTTGATTGTTTGCTTCATCAAATTGATCCCTCTC TTCCCTTGTTTGCTTGAGACGTCCAATGGCAGCATTCAGTGAAATGTTGACCTGTTGGTGGAGA GATATAGAAAGAACACAAACCTAATGTCAACCTTAAGCAGAACAATAATAATTCTTATAGAAAC AATTCAGCAGAAATGTAACTCCACCAGCCCACTATATATTGATAAAAGTAACGCGATTGAATGG TGCTGGAGTATATTTGTAAAGCAAATTTCCAATTTTGTCATTTTTATTCATATTTTTAAAGGAA TATAACTCTTTAAACTTATTTACAAGATGGCATATCAGTTGATTAAATATCTTACATTTTTTAG ATTTAAAATTGATGGCACATAACAACTGCATATCCACATCAAACCTAGCACTGGAAGCCAACAA CCAAACAAATCCTTTAGAAGGTTCTAAATGAGGGAAAAGGCACCTTCTTCAACCGAGCCTCAAG TTCGTCACGTTGCTTCTCCAATTCAGAAATCTCAGCCGTCAACTCCTATACCAGAGACACGTTC ACAAAAAGGGATGAGCATCAACAGATAATACAGTGAAGAAATACCCGCATATGCATTCCTTTTA CAATGTAAACATATGCAATATATGTATTACATGTGCAGGCACTTATGTTCTGCAAATACAAATC AAATGTGCAGAAACCAAGGTCCAAAGGCCTTGTGCTCATGCAAGATGTCTTCCTTTAAGTGAGC ACATGTAATGAAATAAGTTAAGAGAAAGCTCCAAAACTGCTTATGAAAGTCATAATTTGAGTTC CATGATCTGAAATGTATGAGTTCTTAACTTCTTAAAGTACAAGGAGTCCAAAACATGAGATATG GTTCTTACCTTTTCAACTGCACTCACTTCATTCTCCTTTTTAGCACGGAAGTTAAGAGCCTCTT CTTTCTGGCGCCTATTATCCGTATGGCACAATACAACTTGAAAGGTCACCACCAGTTCACCACA AAGTTTCTCATACCAAGAATTCATTATTCAAATATATAACAAACAATTCTAGCATACAACCACA CTAGCGACCAACATTATATGCTTTTGAGTTGTGGCCAGCAATGAATACAGCTCAGAGACAAGAA GATGTTGATAAATGCCAGAATAACGACAACCAGCCAGATGTAAATCTCTAAAGAAAATCACATA AATTCAAAACATGATTATGTGAATCGAGCACTGCTTGATTGTGCCATGCAAATCTGAAGTGTGG AACTAAAGAACATCAACTGCTGCGGTAAAAATTGACAAGATCAGGTGTGCATAGGATTATGGAA CATAGTGGGCATCATAATCATATTTTAGAACCTTCTCTAAGTGTTCATACAGCTACTCTGTATT AGTTTTCCAATTGAAAAACTCTACAAAAAAAAATGAACCTTCTCCCTTTTATGTGAATTCCCCA GAGGCAAACTAACTTGTGAAGGCCTATCTGTTCTATCTCACAAGCCCCAAGAAAACAAAGGCAA AAAGGTATTACGATGTAAACAAACCACCACTAAAGTAACATAAATTTCTAGAACATGTTATGAA GATTTAACAAATGATATCAAAAGATTCATAAAGAAATAAGTTCAGATAGCTATACCTGTGATCC AAAATACGCTTCTCAGCCTTGGAAGATGAATTAGAGAGGGAAGTTGCTAAGACCTTTAATTTGT CAACCTGCAAAGCTAATGGGATTAATGTTGTATCCTGTGCATTTCCCCCCAAATGTTAACAACT TAACATGTACATAGCTCAACCAAAAGATAACACAAAAACGGATACAATCACCAGCAGTGGCATT GGTGACCAGCCACCAGCAGTCACAGGTCCACAGAGCATATGTTAATGCAAAACTTTAGCAGAAG AAATAGATTTTTACGGTCCTCACGTCCAACAAACATGGATCACAGTGCAAAGGTTGTTCAGTAG AAACTAGAAAGTAAATCTAAGTACAGACACAAGAAAGAATAGAGTCCCATAGCCCATCAGGTCA TTTCTTCAATGTATAAAGTCCAAAAATGAAGACCCAGGAACAAAAATAACAGAGCAGTGAAGCA TGCATGCAAATTTGCAGAGCTGAAGATTAAATATATTCTTGTTGAAGTTTTACTGAGTGCATGC ATAAAAATCACTTAAGAAACATGCGATGGCATTCCATGGGATGGGACTAAGATACTTATTCATT ATATGAGGCTGAATATTAGTTAAATAAGTTGACCAGCTAAAATTTGAGATACATAAATTCACAT GAAAACATGCCTTTTGGGAACGAATCTCAAGGGAGTCTCCGGCAGTAGATGTTTTTTTCTTCAG TAAAAGCTCTTCCATTCTAGAGCAGAATCGGACTTCAGAGAGTGCTTCTTTGAATGACTGGTCA AAGCAGAGAATTCAGTTAGCTTCTTAAAACCAATGTGAAACAGAAAACATTTCAAATACAAGAC AGAACAGGTCAAACCAAATTGGGCCACGTGGTACTGAACTACCGAACACAGATGGACCGCATAG ATTTAGCAGGATCAGTATTAGTAATAATTGGACTATCATGGTCAGCGTTTGCTCTAATAAGACT AGTATCAACAAAAGTGCAAACAGAATAATTGAAGGCCCTGAACAATCTTATTTGTGCATGAGAC TGTCTGTAAGTCAACAACTGAACTAAGTCCAGAAAGCCTATGTGAACATCTCATTGGTAAAATG AGCAAAGTAAATCATTTACTCAAATTGAATATAATTCAATAGAGGCAACACCTCAACAGTTGTA GCAGAAGTCCTTTCCGTAGTTTTTGCATGGTCTTCTTGAGTTTGTTGAACTCTTGATGTCTCCT TCTCATTTAGTTTCTTCCACAACTCTACAGCTTCAGCATCTATT |