Plant Circular RNA Database

Detail information of Zm00001d026362_circ_g.2

			
						 General Information
					
						CircRNA Name
						Zm00001d026362_circ_g.2
					
						ID in PlantcircBase
						zma_circ_010363
					
						Alias
						Zm10circ00070
					
						Organism
						
							Zea mays						
					
						Position
						
							chr10: 144227730-144231418  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Zm00001d026362						
					
						Parent gene annotation
						
							Putative MYB DNA-binding domain superfamily protein  
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d026362_circ_g.3 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-GC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d026362_T002:7
Zm00001d026362_T008:7
Zm00001d026362_T001:7
Zm00001d026362_T010:3
Zm00001d026362_T003:7
Zm00001d026362_T005:6
Zm00001d026362_T009:7
Zm00001d026362_T007:7
Zm00001d026362_T004:7
Zm00001d026362_T006:7

General Information
CircRNA Name	Zm00001d026362_circ_g.2
ID in PlantcircBase	zma_circ_010363
Alias	Zm10circ00070
Organism	Zea mays
Position	chr10: 144227730-144231418 JBrowse»
Reference genome	AGPv4.38
Type	ue-circRNA
Identification method	CIRI2
Parent gene	Zm00001d026362
Parent gene annotation	Putative MYB DNA-binding domain superfamily protein
Parent gene strand	-
Alternative splicing	Zm00001d026362_circ_g.3
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-GC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d026362_T002:7 Zm00001d026362_T008:7 Zm00001d026362_T001:7 Zm00001d026362_T010:3 Zm00001d026362_T003:7 Zm00001d026362_T005:6 Zm00001d026362_T009:7 Zm00001d026362_T007:7 Zm00001d026362_T004:7 Zm00001d026362_T006:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AAAAGTTATCAGGAGCAATAATGAAAAGACAGCAATACAAAGGACTAGTTACCTCAGTCTTCTC
AACATCTTTTGGCATTTTCTTTTCATCTTTTAAAATctttttatcaagagcacgtgatagctca
ccaagagctcttatatcagcttctctttcctgtatctgcgaaagtgtgcatggttgattgtaca
ttgactgt

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTTTTTATCAAGAGCACGTGATAGCTCACCAAGAGCTCTTATATCAGCTTCTCTTTCCTGTATC
TGCGAAAGTGTGCATGGTTGATTGTACATTGACTGTTGTGTCGCAACTGCAACCTCATTAACTG
CCGTGTTGGCCTGTGCAATAGAATAAACTGAGTCACTCTCGCACAAATTCCAAAAGGAATGCAG
TTAGCTTATTCTACATTGACTATAGAAAGGTAAATAGCTTCCACATCAAACATGCTACCTTTGC
TTGCTTCATTAAGGTACTCATCGGATGACCAGAAGGGGTATAGAAGGTTGCATCGGTACCATTC
AAATTCGATGTGGATCTTGCTGCACCTCCGCTAGCCAACTCTTTCATCTGATCCTCATATTTTG
CTTCCGATAAGTGGCTGTAGTATCCATTGATGGCACTTTGATGTCTGAGAGATTCAGGAAAATT
TTCCAGAGGATGTAGGGGCATGCAGTCGATATCCTGCAAAACAAGTTCTTTTCAGCCACAGTTG
ACACGCCAACACTTTCAAGAGTTTCATCATTGGACTGATATTTGATATTTACATTTGAATGGAT
CTGAAACATCATTCACAGAGAGACAAGTAATCATGCATATGCATTTCCCTAATTGTGTTGCAAG
ACATAGGCATAAAGGAAACGAGTACAACTGTAGAAGGAACACAAGCATAGATTAGAGGATAATG
GACCGCATGGATCCCATTGAGGCAAATTATTCCCAACTAAAAAAGTAATGTCATGGTTTAGCAT
TTATGGTGGATATTACAATGCACATTTCTTCCATCATTTTGGATGCACAATTTATCCCTTCCCT
GTACCCCGCTCATGTGGGAGCCTCCGGCACCGACTCTGCCCTTTGATGTATTACTGCCGATGTA
GAATCCTATGCAATAAATTAGATTCCACAATATGCACAGCAACCAAAGAGGACAGTAAAACCAA
GAACACTTGGTTGAAGTATATGTGATATAACAAGGAAAACACAAGGAACAAACTACAGAAAATC
ACTCAAGAGTCATGACATTCACGTGCAGGTTCTTCTGTGAAGATGTAAAGCCAAAGAGACTCCA
AGGCTAAAAAGGGTCAAAAGAGAAGAGATTAGGAACCCTTTTATTCATTCCCAGTGTTCTATAG
GCTCTAGGCAAGCAATGGAGCATGTACAGACAGTACAGTGGAGTTATTACAAGTCATTGTGGTA
TCTGGAGTACAGGTAGTAACAATGAGCTGAAAGCATTAAGTCAAAAGACATGAAACGAAACTCC
CAATAAAATGATCAGAACATAAGTGAGATAGCAGCTGATTACCTTCACAAGCTCAACACCCAGT
TCAGGTCGATCAAACTGAACCCGGCACTGATTATGATCGACAGTAAGAACATTCCCATCATGAA
GTTCCCTTGTTCTAGGATGGCAGGCTATAACACGCTGCCCAACTGCTAGAGGTCGCGCAAGATC
GGTTGGTAGACCTTCTCTAACGCCAGATAGAAGTTCAGTATAATGCTGCCTGACTGAATCACGA
TACTGCGCAAGCTTCTCTCTCTCCTCGTGCAAAAACTGCTTCGACAATCGACGGGGCTTTCCAA
GAGAACTGCAAAAACATTACATTTAGGGGGACAAATACAACTAAACCTAACAAAATATTTGAAG
ATTACGAACCTTCGTATGACACCCCACTCGACATGAGTCAGTCTTGGAACATGACCTAGCTTGA
CATGGTTCAAATACTCAACAAATTCACTCTTTGCAAACCACGGGTAATCAATTGCACTATAGAA
CCACTCAAACATGCACCATCTACGGAGCAAACGTGATGATAAGCAATGAGAGAGTTTGTCCTGC
ATTAGGTTAGAGTAAATTGACTTTTCACCCATGCCAAGTAATGAAACACTACCAGTACACTAAA
CAAGATAGAAAGAAATACCTTGAGATCAATAATATTACTTAGTGAGTAAGACAATTTATCACTT
CCAGAATCGCCAGCACCCTCGGCAGGTTTACATTCTTGAGTTAGTGATTTTTGAATGCCTAGTT
TACGACGGCTTTTACCCTTTGCCATCAAGTCAGCATGCAGAGTTGTTGCAACTTGTGTAGTTGT
CTCTGCGATATCCATGGCTACATTCACAAAAAATTAGCATGTGCAGTAGAACATCCCTGTACTA
TGAACTTGTTTTGTAACAAAACTAAACTAATATGGTTATTCTTACTTTTGTTAGAAGATGTCTT
CTCTTCTTCAGGAGAAACCTATAATATATAGATACAACATAAAAAAATTATGTTGCATCCCAGC
AAGCATACATAGGTATGTAGGAGGGTAAAACTTGACTGTGCATGAGTGAGTGACAATTTGAGAA
AACTAAAGAACTAAATAGTTATTCAGTGAAGACTAGTACTCCATACAATATAATGGTGTATAAT
GAAGTAATGCATTAAAATGTTCTGATATAAGCAAAGTCCCTTTTTTTCTTTTTAATACAATGAT
ATGCAGCTCTCTTGCGTGTTCGAGGAAAAAAACATCGTTTGCATGTAAACAATATGAAATTGTA
ACATCAATCAAGTAAATATGGATGGTTTCTCAAGATATCAAGCCTTTACAGGAAAACAACAATA
TCAAACACAAAAAGGAAAGGATTATACTTTTTATAAGAATGACAATTATGACAAACAGCTGCAT
AGCAAGAAGCTATGGACAGAACTCACAGCTTATACTTAGCAGGCTGTCTACAAATCAAAATACA
TATGTGATCTAGCCTACACGGTTATGCAGCAAATGCAACAAGAAATAATATTTATCCCTTCAGA
GCAGATTCGGTATAACCGAACCAAGCCTTTACAACTAATAGTCATCCAATCAAACTAAGGCCCT
GTTTGGCGTCACAGTTTTCAAATACCATAGTATTGAAATACCACAGTTTAAGAATTGCTTTAGC
ATCAATACTATGGTTTTCAAATACCAGAATATAACCATGGTATTTCTTATTACCGTGCATGTTT
GGTTACAGCAGCAAAAGGCTGCTCGGGAGGCAGGAAAACAGTGTATGTGGGCTCGCATGTTGGC
ATAGAAGAGGAAAACTTCAGTCCCAACCTAAGCATCCAAAACTCCAAAAATACTATGGTTTAGG
TCGTACCATAGTATTTGAAACAAAGTTTTACAAGCACCAACCAAACACCTTTCAACCACAAATA
CTACGATATTCACAAATACCATGGTTTTATCTTGAAACTCCAAAAATACTGAGCTACGAAACAG
ACCCTAAATAGGTTAAGATTGACTACATCGCTCACCACTATAAGCAAAAATAAACTCTTGACAA
GATTTAGTTGAGAAATGGACGAGATCAGTATATTACCAGCTCATCTCTAATAACTAATAAGTAC
AAGGCTAGGGGGAGGCTACCTCATGAAAATTACAAAGTGGACCTATGATACACATTTTTTTAGG
AAATTATGATGCACAAATTAATTATAAGGTGGTGGTTCTTCAAACAAATAAGCATAAATGCATA
AGAATTGAATGCAAAGAGGAAATAATCAGATCAGTTGGAAAGTTGAAACTTGAAACTGAACCCC
CATGAAAAAGTTATCAGGAGCAATAATGAAAAGACAGCAATACAAAGGACTAGTTACCTCAGTC
TTCTCAACATCTTTTGGCATTTTCTTTTCATCTTTTAAAAT
						
					

			
		

Sequences
Splice junction sequence	AAAAGTTATCAGGAGCAATAATGAAAAGACAGCAATACAAAGGACTAGTTACCTCAGTCTTCTC AACATCTTTTGGCATTTTCTTTTCATCTTTTAAAATctttttatcaagagcacgtgatagctca ccaagagctcttatatcagcttctctttcctgtatctgcgaaagtgtgcatggttgattgtaca ttgactgt
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTTTTTATCAAGAGCACGTGATAGCTCACCAAGAGCTCTTATATCAGCTTCTCTTTCCTGTATC TGCGAAAGTGTGCATGGTTGATTGTACATTGACTGTTGTGTCGCAACTGCAACCTCATTAACTG CCGTGTTGGCCTGTGCAATAGAATAAACTGAGTCACTCTCGCACAAATTCCAAAAGGAATGCAG TTAGCTTATTCTACATTGACTATAGAAAGGTAAATAGCTTCCACATCAAACATGCTACCTTTGC TTGCTTCATTAAGGTACTCATCGGATGACCAGAAGGGGTATAGAAGGTTGCATCGGTACCATTC AAATTCGATGTGGATCTTGCTGCACCTCCGCTAGCCAACTCTTTCATCTGATCCTCATATTTTG CTTCCGATAAGTGGCTGTAGTATCCATTGATGGCACTTTGATGTCTGAGAGATTCAGGAAAATT TTCCAGAGGATGTAGGGGCATGCAGTCGATATCCTGCAAAACAAGTTCTTTTCAGCCACAGTTG ACACGCCAACACTTTCAAGAGTTTCATCATTGGACTGATATTTGATATTTACATTTGAATGGAT CTGAAACATCATTCACAGAGAGACAAGTAATCATGCATATGCATTTCCCTAATTGTGTTGCAAG ACATAGGCATAAAGGAAACGAGTACAACTGTAGAAGGAACACAAGCATAGATTAGAGGATAATG GACCGCATGGATCCCATTGAGGCAAATTATTCCCAACTAAAAAAGTAATGTCATGGTTTAGCAT TTATGGTGGATATTACAATGCACATTTCTTCCATCATTTTGGATGCACAATTTATCCCTTCCCT GTACCCCGCTCATGTGGGAGCCTCCGGCACCGACTCTGCCCTTTGATGTATTACTGCCGATGTA GAATCCTATGCAATAAATTAGATTCCACAATATGCACAGCAACCAAAGAGGACAGTAAAACCAA GAACACTTGGTTGAAGTATATGTGATATAACAAGGAAAACACAAGGAACAAACTACAGAAAATC ACTCAAGAGTCATGACATTCACGTGCAGGTTCTTCTGTGAAGATGTAAAGCCAAAGAGACTCCA AGGCTAAAAAGGGTCAAAAGAGAAGAGATTAGGAACCCTTTTATTCATTCCCAGTGTTCTATAG GCTCTAGGCAAGCAATGGAGCATGTACAGACAGTACAGTGGAGTTATTACAAGTCATTGTGGTA TCTGGAGTACAGGTAGTAACAATGAGCTGAAAGCATTAAGTCAAAAGACATGAAACGAAACTCC CAATAAAATGATCAGAACATAAGTGAGATAGCAGCTGATTACCTTCACAAGCTCAACACCCAGT TCAGGTCGATCAAACTGAACCCGGCACTGATTATGATCGACAGTAAGAACATTCCCATCATGAA GTTCCCTTGTTCTAGGATGGCAGGCTATAACACGCTGCCCAACTGCTAGAGGTCGCGCAAGATC GGTTGGTAGACCTTCTCTAACGCCAGATAGAAGTTCAGTATAATGCTGCCTGACTGAATCACGA TACTGCGCAAGCTTCTCTCTCTCCTCGTGCAAAAACTGCTTCGACAATCGACGGGGCTTTCCAA GAGAACTGCAAAAACATTACATTTAGGGGGACAAATACAACTAAACCTAACAAAATATTTGAAG ATTACGAACCTTCGTATGACACCCCACTCGACATGAGTCAGTCTTGGAACATGACCTAGCTTGA CATGGTTCAAATACTCAACAAATTCACTCTTTGCAAACCACGGGTAATCAATTGCACTATAGAA CCACTCAAACATGCACCATCTACGGAGCAAACGTGATGATAAGCAATGAGAGAGTTTGTCCTGC ATTAGGTTAGAGTAAATTGACTTTTCACCCATGCCAAGTAATGAAACACTACCAGTACACTAAA CAAGATAGAAAGAAATACCTTGAGATCAATAATATTACTTAGTGAGTAAGACAATTTATCACTT CCAGAATCGCCAGCACCCTCGGCAGGTTTACATTCTTGAGTTAGTGATTTTTGAATGCCTAGTT TACGACGGCTTTTACCCTTTGCCATCAAGTCAGCATGCAGAGTTGTTGCAACTTGTGTAGTTGT CTCTGCGATATCCATGGCTACATTCACAAAAAATTAGCATGTGCAGTAGAACATCCCTGTACTA TGAACTTGTTTTGTAACAAAACTAAACTAATATGGTTATTCTTACTTTTGTTAGAAGATGTCTT CTCTTCTTCAGGAGAAACCTATAATATATAGATACAACATAAAAAAATTATGTTGCATCCCAGC AAGCATACATAGGTATGTAGGAGGGTAAAACTTGACTGTGCATGAGTGAGTGACAATTTGAGAA AACTAAAGAACTAAATAGTTATTCAGTGAAGACTAGTACTCCATACAATATAATGGTGTATAAT GAAGTAATGCATTAAAATGTTCTGATATAAGCAAAGTCCCTTTTTTTCTTTTTAATACAATGAT ATGCAGCTCTCTTGCGTGTTCGAGGAAAAAAACATCGTTTGCATGTAAACAATATGAAATTGTA ACATCAATCAAGTAAATATGGATGGTTTCTCAAGATATCAAGCCTTTACAGGAAAACAACAATA TCAAACACAAAAAGGAAAGGATTATACTTTTTATAAGAATGACAATTATGACAAACAGCTGCAT AGCAAGAAGCTATGGACAGAACTCACAGCTTATACTTAGCAGGCTGTCTACAAATCAAAATACA TATGTGATCTAGCCTACACGGTTATGCAGCAAATGCAACAAGAAATAATATTTATCCCTTCAGA GCAGATTCGGTATAACCGAACCAAGCCTTTACAACTAATAGTCATCCAATCAAACTAAGGCCCT GTTTGGCGTCACAGTTTTCAAATACCATAGTATTGAAATACCACAGTTTAAGAATTGCTTTAGC ATCAATACTATGGTTTTCAAATACCAGAATATAACCATGGTATTTCTTATTACCGTGCATGTTT GGTTACAGCAGCAAAAGGCTGCTCGGGAGGCAGGAAAACAGTGTATGTGGGCTCGCATGTTGGC ATAGAAGAGGAAAACTTCAGTCCCAACCTAAGCATCCAAAACTCCAAAAATACTATGGTTTAGG TCGTACCATAGTATTTGAAACAAAGTTTTACAAGCACCAACCAAACACCTTTCAACCACAAATA CTACGATATTCACAAATACCATGGTTTTATCTTGAAACTCCAAAAATACTGAGCTACGAAACAG ACCCTAAATAGGTTAAGATTGACTACATCGCTCACCACTATAAGCAAAAATAAACTCTTGACAA GATTTAGTTGAGAAATGGACGAGATCAGTATATTACCAGCTCATCTCTAATAACTAATAAGTAC AAGGCTAGGGGGAGGCTACCTCATGAAAATTACAAAGTGGACCTATGATACACATTTTTTTAGG AAATTATGATGCACAAATTAATTATAAGGTGGTGGTTCTTCAAACAAATAAGCATAAATGCATA AGAATTGAATGCAAAGAGGAAATAATCAGATCAGTTGGAAAGTTGAAACTTGAAACTGAACCCC CATGAAAAAGTTATCAGGAGCAATAATGAAAAGACAGCAATACAAAGGACTAGTTACCTCAGTC TTCTCAACATCTTTTGGCATTTTCTTTTCATCTTTTAAAAT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.118599944

Conservation Information
Conserved circRNAs	NA
PMCS	0.118599944

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							144229769-144227811(+)
144229964-144227851(+)
144231399-144227732(-)
						
					

						Potential amino acid sequence
						
							MPSLRRLLPFAIKSACRVVATCVVVSAISMVLLEDVFSSSGETSVFSTSFGIFFSSFKIFLSRA
RDSSPRALISASLSCICESVHG*(+)
MSSLLQEKPQSSQHLLAFSFHLLKSFYQEHVIAHQELLYQLLFPVSAKVCMVDCTLTVVSQLQP
H*(+)
MPKDVEKTEVSPEEEKTSSNKTMDIAETTTQVATTLHADLMAKGKSRRKLGIQKSLTQECKPAE
GAGDSGSDKLSYSLSNIIDLKDKLSHCLSSRLLRRWCMFEWFYSAIDYPWFAKSEFVEYLNHVK
LGHVPRLTHVEWGVIRSSLGKPRRLSKQFLHEEREKLAQYRDSVRQHYTELLSGVREGLPTDLA
RPLAVGQRVIACHPRTRELHDGNVLTVDHNQCRVQFDRPELGVELVKDIDCMPLHPLENFPESL
RHQSAINGYYSHLSEAKYEDQMKELASGGAARSTSNLNGTDATFYTPSGHPMSTLMKQAKANTA
VNEVAVATQQSMYNQPCTLSQIQEREADIRALGELSRALDKKILKDEKKMPKDVEKTEVSPEEE
KTSSNKTMDIAETTTQVATTLHADLMAKGKSRRKLGIQKSLTQECKPAEGAGDSGSDKLSYSLS
NIIDLKDKLSHCLSSRLLRRWCMFEWFYSAIDYPWFAKSEFVEYLNHVKLGHVPRLTHVEWGVI
RSSLGKPRRLSKQFLHEEREKLAQYRDSVRQHYTELLSGVREGLPTDLARPLAVGQRVIACHPR
TRELHDGNVLTVDHNQCRVQFDRPELGVELVKDIDCMPLHPLENFPESLRHQSAINGYYSHLSE
AKYEDQMKELASGGAARSTSNLNGTDATFYTPSGHPMSTLMKQAKANTAVNEVAVATQQSMYNQ
PCTLSQIQEREADIRALGELSRALDKKILKDEKKMPKDVEKTEVSPEEEKTSSNKTMDIAETTT
QVATTLHADLMAKGKSRRKLGIQKSLTQECKPAEGAGDSGSDKLSYSLSNIIDLKDKLSHCLSS
RLLRRWCMFEWFYSAIDYPWFAKSEFVEYLNHVKLGHVPRLTHVEWGVIRSSLGKPRRLSKQFL
HEEREKLAQYRDSVRQHYTELLSGVREGLPTDLARPLAVGQRVIACHPRTRELHDGNVLTVDHN
QCRVQFDRPELGVELVKDIDCMPLHPLENFPESLRHQSAINGYYSHLSEAKYEDQMKELASGGA
ARSTSNLNGTDATFYTPSGHPMSTLMKQAKANTAVNEVAVATQQSMYNQPCTLSQIQEREADIR
ALGELSRALDKKILKDEKKMPKDVEKTEVSPEEEKTSSNKTMDIAETTTQVATTLHADLMAKGK
SRRKLGIQKSLTQECKPAEGAGDSGSDKLSYSLSNIIDLKDKLSHCLSSRLLRRWCMFEWFYSA
IDYPWFAKSEFVEYLNHVKLGHVPRLTHVEWGVIRSSLGKPRRLSKQFLHEEREKLAQYRDSVR
QHYTELLSGVREGLPTDLARPLAVGQRVIACHPRTRELHDGNVLTVDHNQCRVQFDRPELGVEL
VKDIDCMPLHPLENFPESLRHQSAINGYYSHLSEAKYEDQMKELASGGAARSTSNLNGTDATFY
TPSGHPMSTLMKQAKANTAVNEVAVATQQSMYNQPCTLSQIQEREADIRALGELSRALDKK(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	144229769-144227811(+) 144229964-144227851(+) 144231399-144227732(-)
Potential amino acid sequence	MPSLRRLLPFAIKSACRVVATCVVVSAISMVLLEDVFSSSGETSVFSTSFGIFFSSFKIFLSRA RDSSPRALISASLSCICESVHG(+) MSSLLQEKPQSSQHLLAFSFHLLKSFYQEHVIAHQELLYQLLFPVSAKVCMVDCTLTVVSQLQP H(+) MPKDVEKTEVSPEEEKTSSNKTMDIAETTTQVATTLHADLMAKGKSRRKLGIQKSLTQECKPAE GAGDSGSDKLSYSLSNIIDLKDKLSHCLSSRLLRRWCMFEWFYSAIDYPWFAKSEFVEYLNHVK LGHVPRLTHVEWGVIRSSLGKPRRLSKQFLHEEREKLAQYRDSVRQHYTELLSGVREGLPTDLA RPLAVGQRVIACHPRTRELHDGNVLTVDHNQCRVQFDRPELGVELVKDIDCMPLHPLENFPESL RHQSAINGYYSHLSEAKYEDQMKELASGGAARSTSNLNGTDATFYTPSGHPMSTLMKQAKANTA VNEVAVATQQSMYNQPCTLSQIQEREADIRALGELSRALDKKILKDEKKMPKDVEKTEVSPEEE KTSSNKTMDIAETTTQVATTLHADLMAKGKSRRKLGIQKSLTQECKPAEGAGDSGSDKLSYSLS NIIDLKDKLSHCLSSRLLRRWCMFEWFYSAIDYPWFAKSEFVEYLNHVKLGHVPRLTHVEWGVI RSSLGKPRRLSKQFLHEEREKLAQYRDSVRQHYTELLSGVREGLPTDLARPLAVGQRVIACHPR TRELHDGNVLTVDHNQCRVQFDRPELGVELVKDIDCMPLHPLENFPESLRHQSAINGYYSHLSE AKYEDQMKELASGGAARSTSNLNGTDATFYTPSGHPMSTLMKQAKANTAVNEVAVATQQSMYNQ PCTLSQIQEREADIRALGELSRALDKKILKDEKKMPKDVEKTEVSPEEEKTSSNKTMDIAETTT QVATTLHADLMAKGKSRRKLGIQKSLTQECKPAEGAGDSGSDKLSYSLSNIIDLKDKLSHCLSS RLLRRWCMFEWFYSAIDYPWFAKSEFVEYLNHVKLGHVPRLTHVEWGVIRSSLGKPRRLSKQFL HEEREKLAQYRDSVRQHYTELLSGVREGLPTDLARPLAVGQRVIACHPRTRELHDGNVLTVDHN QCRVQFDRPELGVELVKDIDCMPLHPLENFPESLRHQSAINGYYSHLSEAKYEDQMKELASGGA ARSTSNLNGTDATFYTPSGHPMSTLMKQAKANTAVNEVAVATQQSMYNQPCTLSQIQEREADIR ALGELSRALDKKILKDEKKMPKDVEKTEVSPEEEKTSSNKTMDIAETTTQVATTLHADLMAKGK SRRKLGIQKSLTQECKPAEGAGDSGSDKLSYSLSNIIDLKDKLSHCLSSRLLRRWCMFEWFYSA IDYPWFAKSEFVEYLNHVKLGHVPRLTHVEWGVIRSSLGKPRRLSKQFLHEEREKLAQYRDSVR QHYTELLSGVREGLPTDLARPLAVGQRVIACHPRTRELHDGNVLTVDHNQCRVQFDRPELGVEL VKDIDCMPLHPLENFPESLRHQSAINGYYSHLSEAKYEDQMKELASGGAARSTSNLNGTDATFY TPSGHPMSTLMKQAKANTAVNEVAVATQQSMYNQPCTLSQIQEREADIRALGELSRALDKK(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020

circRNA

Detail information of Zm00001d026362_circ_g.2

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