Plant Circular RNA Database

Detail information of Solyc12g056650.1_circ_g.2

			
						 General Information
					
						CircRNA Name
						Solyc12g056650.1_circ_g.2
					
						ID in PlantcircBase
						sly_circ_003656
					
						Alias
						NA
					
						Organism
						
							Solanum lycopersicum						
					
						Position
						
							chr12: 62634031-62638651  JBrowse»						
					
						Reference genome
						
							SL2.50.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Solyc12g056650.1						
					
						Parent gene annotation
						
							protein_coding
							
						Parent gene strand
						-
					
						Alternative splicing
						
							NA						
					
						Support reads
						2
					
						Tissues
						fruit
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Solyc12g056650.1.1:8

General Information
CircRNA Name	Solyc12g056650.1_circ_g.2
ID in PlantcircBase	sly_circ_003656
Alias	NA
Organism	Solanum lycopersicum
Position	chr12: 62634031-62638651 JBrowse»
Reference genome	SL2.50.38
Type	e-circRNA
Identification method	CIRI
Parent gene	Solyc12g056650.1
Parent gene annotation	protein_coding
Parent gene strand	-
Alternative splicing	NA
Support reads	2
Tissues	fruit
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Solyc12g056650.1.1:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AGAGATGGTTACAGAATTTACTGAATACCTCAGCTATATCTTCAGGAAATTGTTCTGATGTGAA
CTGACCAAAGTATTTAACATAAGCGGTAATTTGATCctgctttttattacatgaagtgtcgcca
cccagaatttcaatttcttcaatttgcctcaagggggggaaaagcaaagcaggttgagaaagta
ctcggaaa

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTGCTTTTTATTACATGAAGTGTCGCCACCCAGAATTTCAATTTCTTCAATTTGCCTCAAGGGG
GGGAAAAGCAAAGCAGGTTGAGAAAGTACTCGGAAAAGTAAAGCTGCTGCAGAATCTGCAGCAA
TTCCTGCTCTCATGGACATGGCAATTCCAATTGCACGCAAGAAATGCAAGTGCATCCAATTCCT
AGGAAGCTTTGGCAATACATAAAATGTTAGGAATTCTACCAAAAGAAGCTAAAAGAAAAAATTC
CACTAATGTAGGATAGAAAGGTGTACTCAAGCAACACAACCAATCAAGTTCTTTAATAATTAAA
TACATTTTTGCGGAGAACAATTCAGAGATCATAGTTTATACAAAGGATTTCAAGGATAGCTGAA
AGCGACAGAAGTTCACTACAACAAAACAACTCAATAAGAACTATATGCTTCAATTCCAAACTAG
TCGGGGTTGGCTATGTTGATTCTCAGTATCAATTTGGTACATTTAGGACCATTCCATTCTAATA
ACAGTCTCTCTGAAACTAGAAATCCTCTCTATATTCTACTGACTAGAAATCTATATTTAAGAGA
TTTATCATATAGAATCACTCCTACCAGAAATCGTGATCAAACCTCTTGCTCATCCCTGAACTAG
TTTCATATGTAAAAAGCTTGGCACTAACTTGACAGAAGGTATCATAAATAACAGGCACATGGAA
GATTAGAGGTGTGCTAACTTGGACTATAGTCTTACAGAATACCTTGTACATGTTTATATAAACC
CTACGTGTAAGACACTCTCCTCGTGCATTTGGTCAAAATCTTCTTTCATATCTCACATATATTA
TTTGTAGTATAATTAAATTATACCCCTCCGGCAGTTTAAACACTTCATTTTAGATAAAACTGTT
TCAACATGGTACTAGAGTATGAAGAGCAACTTAGTTCAACAATCAAGGTACCGCCACCAACAAT
AACAACTATGCCTTAAACCCAAGCTAGTTGGAATCAGCTATGTGAATCCTCACTATTTATGCCG
CTTCAGTTAGACACATGTCTAATATTATCACCATCAGCAATAAAAAACAAGAGATAATTACAGT
CAAATGTCTTTCGGTGATCCAATTTACAAAATAGTCAGCAAATGTATAAGCTTTGTGTATTAAG
TAAAAATTAAGTTGCTCGGACTCTTCACTTTTGGTGCCGCACCAGTGTCGACATGACATGGGTG
TGGGTGTGGGATCCGTACCCGATCTGGTCAACCGGTTTTGGGTACTTTGATTAGAAATATACAT
AATTAGTTTTTGTATATTTCGGCTAGCGTCTGTAGTTAATTTTGGCCTACGGGACAAAATTGGA
AAAAGCCCAAAAAATTCCTAAATTGGTAAAATGAAAATCAGACCAACAAACGAAGGACCAGGTT
GTAGAATGTAAGTAATAAAACAAAAATGTCCGTTGCTGACAACTTAAGCTCTTAGAGAGGCAAC
TAAGACAATTTAACATACAGGAATTGGCTATATATCAAGACTGCAAACAGTGAATTCTTTATGT
CTACATGTCTACAGATATGCTCCTTTCGGACAAGAAAACATAGTAGTTTGGGGCAAGTTTATAT
AAAATTCATACAGAACAATTCTATCTGTGTGTTCCAACATAGTATAGATGGTTAAAAAAGTATA
ACCTTACAGTTGTATAAAGAACCACAAAGAAAACAGAGAATGAATATAAATTGCTAATATGTTC
CGACGTATAGCAGATTGATGCTCAAATATCACAATACTTTGACAGAAAATTTTTAAACTTACAC
GCAGACCAGATGCATAATCCTCAGCTGCTCGCAGAAGTTCCACTAGTTGTACCGCAGCATCAAG
TGCATCTGGAGCCCAAGATGGTGGAGCTTCTAAAAGTCCAACAAGAAGCCTCTGTGTGGCACTT
GGAGTTGCGATTGCATAATATCTAATCCAGAAACAGAAGTTAAAATGAGTCCTTTATTCAAAGA
TGTAAAGTTAAATTAAATCATGCTCTTACTCTTACCGATGAAATAAACGTGCATATGGCTCAAG
TGGTGGTAGTCCTGCAACGAGGTGCTCATCCATAGGCGTTGTTGGAGGTGGAAGCAGAAGTGCA
GGAACAGCGGCTGCAGTCAAGGTAGCAGTCTCGTAGCGAGAAACTTCCTCATCACAAACACTTA
AAATAACGCCAGCACCATTAGCAACAGCCCACCTTGGAGTTGCAGGCAGTAGTTGTGGATGCTT
CCCAGACCCATGAGAAGCAGCTAAAATAAACTTTCAAGTCAGTAACAATTCTGTTGCGATTCTA
ACATATGAAAACACTTTAAATTAATATCTTAGCCTTCTACAAGAAAGTTGTGAAACTCAGTGTC
TAATAGGAGGGACAAGTGGAAGAAAATGAAGAGAAACAAAGCAAATGTATGTTATCTATTGAGT
TATATTACTTCTCCTACATAGATTGTGTAAGAGCATCCAAATTATTTATTAAGGTTTTTAGCTA
TTCTACTCAGATTCACATAGTATGACATCCTTTGGTAAGCCGATTCACCCACTAGTGAGTCCAT
GCTAGAGTTGATGTACGAATCTTACATGTGCAAAAAGGTATTGACTATTCACCCATATATTTTT
CTCAAGTAAGTTGTGTAAGGGCTTCCAAAGTGTTGTAAATATCTTGGGAGTTTTTCACGCAGTG
ACTTAAGGATTTAAGGGTGAATGCTTAGATTCTTTCACATAATCACAATTAGCGGAAATTGCAG
TGGCAGTCAAGGACAACTGTTCCTCTTTCTTATTCTTCTCAAGAAACATAATCTAGAAAAAGAA
AAGGAACTAATGTTAACGTAAGGAAGATTATATTTCTTTTGCAAGACTTGGTAAGAAACATGAA
CCCAGAGCAATATTTTCGCAAGCTAGAGGATGACTATCATAGGGCAAGTAACTAGAGGACACTA
ATCTATTACCACTTTTACCCAGCATGAAGACTTTTTGCACTGATTTTCAAGCATGTTATCCATG
TCCACGGGAATAGCACTAAGGTTGCTAAAAAACTAAAAGTTGTAAGTGAAGGTCTAGAGCCATA
GACAGGAGCAAGTATTTCATAAAACAGAAGTCCACATACCACTTGATGGGGGCTTGAGATCTCC
AGCAGCATACTTTCCCATAACACCGCCACACCTGCACAAGCATGAAACATTTCACAGCAGTTAG
CAGGATTGTGTAGTTTCCGGTTATCCTTTTTCATCAGTCTCAATCTCTACAAGTACCAATTTAG
AGAATCTCAATGAAAAATATTCTACGTCAATAAAATAATAGTAATGAAGTTCTTTAATTTGAAG
AGCACCAAAAAGAGGATAAATGTCAACTAGCATTCGAAAAATTCTGAAGGAATCAAATGGACTC
GAAGCTGTATTACTAAAGGAGAAAAGTTCAGAAAAAAAGAAGCATTCTGAAGTCTATTAGCGGC
TTTACACACAAAGCATTGATAAGGCCGGGGCTTCAGCGAAGAAAGGTGCAATTGAAGGGAAATA
GTACACACACACTCTAAGACAACCCAAACCAACATTCCCTGAGTAATCAATGGGCAACGTGCTA
AACCAAGACAACCAGATGCAAATGCCCACTGTCCAGTACAAGAAAAAAGGATACAAAATACTCC
TATCAATGAATGCTAATGAATTTTTCCTATATTCTTAATGAATTTTTAAGTGCAATGGAACATC
TAACCTGCAAACAACATTGAGAGATGCTTACCAGCGGAAGTAATCGCTTCTAATCCCTAGTGGT
GCAGCAAGCAATATATCAGTGATCCACGGAGACAATGGTCTCAGCAGTTTTCTCTCATGTTGTA
TAGAGGGCACACCAGGTTCACTAGAGGAAGATTCACTTGTCGAAGTGTGGCTTCCACTGGTGCT
TCTATCTGTTCCTTTGTCCTGACGATCAACTTTGAAAATCGGGCGGTTGTAGTGTGTTAGGATA
CGTAAAATCTCTCCACATGCAAGAGCCCATTGTTCAGAATATTCCTTCTGTGTTAAAGGGTTAA
TGATTAGTAGTGAGACTCATATTATGATATTCAAGATGGGCTTCAAAAATATGATAAGAGTAAA
AAAGCATGATGAGATTAGTTAAGTTAATTTTTTAATGAATCTGCATACCTCACTGCTTGAGCAA
ACCAGTGATATAAAAGAAGCAAAAGGTGGACTACTTTTATCATACTCCAGTGTTCCATCAATGA
TGCATGAAATAATTGGATGAACTACAGCATGCCCATGCTCTGGGTGATGAAGAACAAAAGTTGC
TGGCAATTATAACAAACAACAAAATATAGAAACAACTCAATCAATCCTCACAAGTAGGTGGAAG
CAATACTGTAAATGCTAAATAATAGGTGAGAAGAATACCTAAAACATCATCAAAAAGTCTGTTC
TCCTTCGATGGATACCGGTTCCTTATGAGCTGCCAATTATAACACATGTAGTTAGTTTAGAGGG
AAGAATGAACACAACTTGTTCAGATATTGAAAATTATCAACAGAGATGGTTACAGAATTTACTG
AATACCTCAGCTATATCTTCAGGAAATTGTTCTGATGTGAACTGACCAAAGTATTTAACATAAG
CGGTAATTTGATC
						
					

			
		

Sequences
Splice junction sequence	AGAGATGGTTACAGAATTTACTGAATACCTCAGCTATATCTTCAGGAAATTGTTCTGATGTGAA CTGACCAAAGTATTTAACATAAGCGGTAATTTGATCctgctttttattacatgaagtgtcgcca cccagaatttcaatttcttcaatttgcctcaagggggggaaaagcaaagcaggttgagaaagta ctcggaaa
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTGCTTTTTATTACATGAAGTGTCGCCACCCAGAATTTCAATTTCTTCAATTTGCCTCAAGGGG GGGAAAAGCAAAGCAGGTTGAGAAAGTACTCGGAAAAGTAAAGCTGCTGCAGAATCTGCAGCAA TTCCTGCTCTCATGGACATGGCAATTCCAATTGCACGCAAGAAATGCAAGTGCATCCAATTCCT AGGAAGCTTTGGCAATACATAAAATGTTAGGAATTCTACCAAAAGAAGCTAAAAGAAAAAATTC CACTAATGTAGGATAGAAAGGTGTACTCAAGCAACACAACCAATCAAGTTCTTTAATAATTAAA TACATTTTTGCGGAGAACAATTCAGAGATCATAGTTTATACAAAGGATTTCAAGGATAGCTGAA AGCGACAGAAGTTCACTACAACAAAACAACTCAATAAGAACTATATGCTTCAATTCCAAACTAG TCGGGGTTGGCTATGTTGATTCTCAGTATCAATTTGGTACATTTAGGACCATTCCATTCTAATA ACAGTCTCTCTGAAACTAGAAATCCTCTCTATATTCTACTGACTAGAAATCTATATTTAAGAGA TTTATCATATAGAATCACTCCTACCAGAAATCGTGATCAAACCTCTTGCTCATCCCTGAACTAG TTTCATATGTAAAAAGCTTGGCACTAACTTGACAGAAGGTATCATAAATAACAGGCACATGGAA GATTAGAGGTGTGCTAACTTGGACTATAGTCTTACAGAATACCTTGTACATGTTTATATAAACC CTACGTGTAAGACACTCTCCTCGTGCATTTGGTCAAAATCTTCTTTCATATCTCACATATATTA TTTGTAGTATAATTAAATTATACCCCTCCGGCAGTTTAAACACTTCATTTTAGATAAAACTGTT TCAACATGGTACTAGAGTATGAAGAGCAACTTAGTTCAACAATCAAGGTACCGCCACCAACAAT AACAACTATGCCTTAAACCCAAGCTAGTTGGAATCAGCTATGTGAATCCTCACTATTTATGCCG CTTCAGTTAGACACATGTCTAATATTATCACCATCAGCAATAAAAAACAAGAGATAATTACAGT CAAATGTCTTTCGGTGATCCAATTTACAAAATAGTCAGCAAATGTATAAGCTTTGTGTATTAAG TAAAAATTAAGTTGCTCGGACTCTTCACTTTTGGTGCCGCACCAGTGTCGACATGACATGGGTG TGGGTGTGGGATCCGTACCCGATCTGGTCAACCGGTTTTGGGTACTTTGATTAGAAATATACAT AATTAGTTTTTGTATATTTCGGCTAGCGTCTGTAGTTAATTTTGGCCTACGGGACAAAATTGGA AAAAGCCCAAAAAATTCCTAAATTGGTAAAATGAAAATCAGACCAACAAACGAAGGACCAGGTT GTAGAATGTAAGTAATAAAACAAAAATGTCCGTTGCTGACAACTTAAGCTCTTAGAGAGGCAAC TAAGACAATTTAACATACAGGAATTGGCTATATATCAAGACTGCAAACAGTGAATTCTTTATGT CTACATGTCTACAGATATGCTCCTTTCGGACAAGAAAACATAGTAGTTTGGGGCAAGTTTATAT AAAATTCATACAGAACAATTCTATCTGTGTGTTCCAACATAGTATAGATGGTTAAAAAAGTATA ACCTTACAGTTGTATAAAGAACCACAAAGAAAACAGAGAATGAATATAAATTGCTAATATGTTC CGACGTATAGCAGATTGATGCTCAAATATCACAATACTTTGACAGAAAATTTTTAAACTTACAC GCAGACCAGATGCATAATCCTCAGCTGCTCGCAGAAGTTCCACTAGTTGTACCGCAGCATCAAG TGCATCTGGAGCCCAAGATGGTGGAGCTTCTAAAAGTCCAACAAGAAGCCTCTGTGTGGCACTT GGAGTTGCGATTGCATAATATCTAATCCAGAAACAGAAGTTAAAATGAGTCCTTTATTCAAAGA TGTAAAGTTAAATTAAATCATGCTCTTACTCTTACCGATGAAATAAACGTGCATATGGCTCAAG TGGTGGTAGTCCTGCAACGAGGTGCTCATCCATAGGCGTTGTTGGAGGTGGAAGCAGAAGTGCA GGAACAGCGGCTGCAGTCAAGGTAGCAGTCTCGTAGCGAGAAACTTCCTCATCACAAACACTTA AAATAACGCCAGCACCATTAGCAACAGCCCACCTTGGAGTTGCAGGCAGTAGTTGTGGATGCTT CCCAGACCCATGAGAAGCAGCTAAAATAAACTTTCAAGTCAGTAACAATTCTGTTGCGATTCTA ACATATGAAAACACTTTAAATTAATATCTTAGCCTTCTACAAGAAAGTTGTGAAACTCAGTGTC TAATAGGAGGGACAAGTGGAAGAAAATGAAGAGAAACAAAGCAAATGTATGTTATCTATTGAGT TATATTACTTCTCCTACATAGATTGTGTAAGAGCATCCAAATTATTTATTAAGGTTTTTAGCTA TTCTACTCAGATTCACATAGTATGACATCCTTTGGTAAGCCGATTCACCCACTAGTGAGTCCAT GCTAGAGTTGATGTACGAATCTTACATGTGCAAAAAGGTATTGACTATTCACCCATATATTTTT CTCAAGTAAGTTGTGTAAGGGCTTCCAAAGTGTTGTAAATATCTTGGGAGTTTTTCACGCAGTG ACTTAAGGATTTAAGGGTGAATGCTTAGATTCTTTCACATAATCACAATTAGCGGAAATTGCAG TGGCAGTCAAGGACAACTGTTCCTCTTTCTTATTCTTCTCAAGAAACATAATCTAGAAAAAGAA AAGGAACTAATGTTAACGTAAGGAAGATTATATTTCTTTTGCAAGACTTGGTAAGAAACATGAA CCCAGAGCAATATTTTCGCAAGCTAGAGGATGACTATCATAGGGCAAGTAACTAGAGGACACTA ATCTATTACCACTTTTACCCAGCATGAAGACTTTTTGCACTGATTTTCAAGCATGTTATCCATG TCCACGGGAATAGCACTAAGGTTGCTAAAAAACTAAAAGTTGTAAGTGAAGGTCTAGAGCCATA GACAGGAGCAAGTATTTCATAAAACAGAAGTCCACATACCACTTGATGGGGGCTTGAGATCTCC AGCAGCATACTTTCCCATAACACCGCCACACCTGCACAAGCATGAAACATTTCACAGCAGTTAG CAGGATTGTGTAGTTTCCGGTTATCCTTTTTCATCAGTCTCAATCTCTACAAGTACCAATTTAG AGAATCTCAATGAAAAATATTCTACGTCAATAAAATAATAGTAATGAAGTTCTTTAATTTGAAG AGCACCAAAAAGAGGATAAATGTCAACTAGCATTCGAAAAATTCTGAAGGAATCAAATGGACTC GAAGCTGTATTACTAAAGGAGAAAAGTTCAGAAAAAAAGAAGCATTCTGAAGTCTATTAGCGGC TTTACACACAAAGCATTGATAAGGCCGGGGCTTCAGCGAAGAAAGGTGCAATTGAAGGGAAATA GTACACACACACTCTAAGACAACCCAAACCAACATTCCCTGAGTAATCAATGGGCAACGTGCTA AACCAAGACAACCAGATGCAAATGCCCACTGTCCAGTACAAGAAAAAAGGATACAAAATACTCC TATCAATGAATGCTAATGAATTTTTCCTATATTCTTAATGAATTTTTAAGTGCAATGGAACATC TAACCTGCAAACAACATTGAGAGATGCTTACCAGCGGAAGTAATCGCTTCTAATCCCTAGTGGT GCAGCAAGCAATATATCAGTGATCCACGGAGACAATGGTCTCAGCAGTTTTCTCTCATGTTGTA TAGAGGGCACACCAGGTTCACTAGAGGAAGATTCACTTGTCGAAGTGTGGCTTCCACTGGTGCT TCTATCTGTTCCTTTGTCCTGACGATCAACTTTGAAAATCGGGCGGTTGTAGTGTGTTAGGATA CGTAAAATCTCTCCACATGCAAGAGCCCATTGTTCAGAATATTCCTTCTGTGTTAAAGGGTTAA TGATTAGTAGTGAGACTCATATTATGATATTCAAGATGGGCTTCAAAAATATGATAAGAGTAAA AAAGCATGATGAGATTAGTTAAGTTAATTTTTTAATGAATCTGCATACCTCACTGCTTGAGCAA ACCAGTGATATAAAAGAAGCAAAAGGTGGACTACTTTTATCATACTCCAGTGTTCCATCAATGA TGCATGAAATAATTGGATGAACTACAGCATGCCCATGCTCTGGGTGATGAAGAACAAAAGTTGC TGGCAATTATAACAAACAACAAAATATAGAAACAACTCAATCAATCCTCACAAGTAGGTGGAAG CAATACTGTAAATGCTAAATAATAGGTGAGAAGAATACCTAAAACATCATCAAAAAGTCTGTTC TCCTTCGATGGATACCGGTTCCTTATGAGCTGCCAATTATAACACATGTAGTTAGTTTAGAGGG AAGAATGAACACAACTTGTTCAGATATTGAAAATTATCAACAGAGATGGTTACAGAATTTACTG AATACCTCAGCTATATCTTCAGGAAATTGTTCTGATGTGAACTGACCAAAGTATTTAACATAAG CGGTAATTTGATC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.172964791

Conservation Information
Conserved circRNAs	NA
PMCS	0.172964791

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							62637186-62634033(-)
						
						Potential amino acid sequence
						
							MGKYAAGDLKPPSSAASHGSGKHPQLLPATPRWAVANGAGVILSVCDEEVSRYETATLTAAAVP
ALLLPPPTTPMDEHLVAGLPPLEPYARLFHRYYAIATPSATQRLLVGLLEAPPSWAPDALDAAV
QLVELLRAAEDYASGLRLPRNWMHLHFLRAIGIAMSMRAGIAADSAAALLFRVLSQPALLFPPL
RQIEEIEILGGDTSCNKKQDQITAYVKYFGQFTSEQFPEDIAELIRNRYPSKENRLFDDVLATF
VLHHPEHGHAVVHPIISCIIDGTLEYDKSSPPFASFISLVCSSSEKEYSEQWALACGEILRILT
HYNRPIFKVDRQDKGTDRSTSGSHTSTSESSSSEPGVPSIQHERKLLRPLSPWITDILLAAPLG
IRSDYFRWCGGVMGKYAAGDLKPPSSAASHGSGKHPQLLPATPRWAVANGAGVILSVCDEEVSR
YETATLTAAAVPALLLPPPTTPMDEHLVAGLPPLEPYARLFHRYYAIATPSATQRLLVGLLEAP
PSWAPDALDAAVQLVELLRAAEDYASGLRLPRNWMHLHFLRAIGIAMSMRAGIAADSAAALLFR
VLSQPALLFPPLRQIEEIEILGGDTSCNKKQDQITAYVKYFGQFTSEQFPEDIAELIRNRYPSK
ENRLFDDVLATFVLHHPEHGHAVVHPIISCIIDGTLEYDKSSPPFASFISLVCSSSEKEYSEQW
ALACGEILRILTHYNRPIFKVDRQDKGTDRSTSGSHTSTSESSSSEPGVPSIQHERKLLRPLSP
WITDILLAAPLGIRSDYFRWCGGVMGKYAAGDLKPPSSAASHGSGKHPQLLPATPRWAVANGAG
VILSVCDEEVSRYETATLTAAAVPALLLPPPTTPMDEHLVAGLPPLEPYARLFHRYYAIATPSA
TQRLLVGLLEAPPSWAPDALDAAVQLVELLRAAEDYASGLRLPRNWMHLHFLRAIGIAMSMRAG
IAADSAAALLFRVLSQPALLFPPLRQIEEIEILGGDTSCNKKQDQITAYVKYFGQFTSEQFPED
IAELIRNRYPSKENRLFDDVLATFVLHHPEHGHAVVHPIISCIIDGTLEYDKSSPPFASFISLV
CSSSEKEYSEQWALACGEILRILTHYNRPIFKVDRQDKGTDRSTSGSHTSTSESSSSEPGVPSI
QHERKLLRPLSPWITDILLAAPLGIRSDYFRWCGGVMGKYAAGDLKPPSSAASHGSGKHPQLLP
ATPRWAVANGAGVILSVCDEEVSRYETATLTAAAVPALLLPPPTTPMDEHLVAGLPPLEPYARL
FHRYYAIATPSATQRLLVGLLEAPPSWAPDALDAAVQLVELLRAAEDYASGLRLPRNWMHLHFL
RAIGIAMSMRAGIAADSAAALLFRVLSQPALLFPPLRQIEEIEILGGDTSCNKKQ(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	62637186-62634033(-)
Potential amino acid sequence	MGKYAAGDLKPPSSAASHGSGKHPQLLPATPRWAVANGAGVILSVCDEEVSRYETATLTAAAVP ALLLPPPTTPMDEHLVAGLPPLEPYARLFHRYYAIATPSATQRLLVGLLEAPPSWAPDALDAAV QLVELLRAAEDYASGLRLPRNWMHLHFLRAIGIAMSMRAGIAADSAAALLFRVLSQPALLFPPL RQIEEIEILGGDTSCNKKQDQITAYVKYFGQFTSEQFPEDIAELIRNRYPSKENRLFDDVLATF VLHHPEHGHAVVHPIISCIIDGTLEYDKSSPPFASFISLVCSSSEKEYSEQWALACGEILRILT HYNRPIFKVDRQDKGTDRSTSGSHTSTSESSSSEPGVPSIQHERKLLRPLSPWITDILLAAPLG IRSDYFRWCGGVMGKYAAGDLKPPSSAASHGSGKHPQLLPATPRWAVANGAGVILSVCDEEVSR YETATLTAAAVPALLLPPPTTPMDEHLVAGLPPLEPYARLFHRYYAIATPSATQRLLVGLLEAP PSWAPDALDAAVQLVELLRAAEDYASGLRLPRNWMHLHFLRAIGIAMSMRAGIAADSAAALLFR VLSQPALLFPPLRQIEEIEILGGDTSCNKKQDQITAYVKYFGQFTSEQFPEDIAELIRNRYPSK ENRLFDDVLATFVLHHPEHGHAVVHPIISCIIDGTLEYDKSSPPFASFISLVCSSSEKEYSEQW ALACGEILRILTHYNRPIFKVDRQDKGTDRSTSGSHTSTSESSSSEPGVPSIQHERKLLRPLSP WITDILLAAPLGIRSDYFRWCGGVMGKYAAGDLKPPSSAASHGSGKHPQLLPATPRWAVANGAG VILSVCDEEVSRYETATLTAAAVPALLLPPPTTPMDEHLVAGLPPLEPYARLFHRYYAIATPSA TQRLLVGLLEAPPSWAPDALDAAVQLVELLRAAEDYASGLRLPRNWMHLHFLRAIGIAMSMRAG IAADSAAALLFRVLSQPALLFPPLRQIEEIEILGGDTSCNKKQDQITAYVKYFGQFTSEQFPED IAELIRNRYPSKENRLFDDVLATFVLHHPEHGHAVVHPIISCIIDGTLEYDKSSPPFASFISLV CSSSEKEYSEQWALACGEILRILTHYNRPIFKVDRQDKGTDRSTSGSHTSTSESSSSEPGVPSI QHERKLLRPLSPWITDILLAAPLGIRSDYFRWCGGVMGKYAAGDLKPPSSAASHGSGKHPQLLP ATPRWAVANGAGVILSVCDEEVSRYETATLTAAAVPALLLPPPTTPMDEHLVAGLPPLEPYARL FHRYYAIATPSATQRLLVGLLEAPPSWAPDALDAAVQLVELLRAAEDYASGLRLPRNWMHLHFL RAIGIAMSMRAGIAADSAAALLFRVLSQPALLFPPLRQIEEIEILGGDTSCNKKQ(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zuo et al., 2016

circRNA

Detail information of Solyc12g056650.1_circ_g.2

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