CircRNA Name |
AT1G17840_circ_g.1 |
ID in PlantcircBase |
ath_circ_003166 |
Alias |
Ath_circ_FC0417, AT1G17840_C1 |
Organism |
Arabidpsis thaliana |
Position |
chr1: 6143479-6143768 JBrowse» |
Reference genome |
TAIR10.38 |
Type |
e-circRNA
|
Identification method |
CIRCexplorer, PcircRNA_finder, circRNA_finder, find_circ, CIRI-full, CIRI2 |
Parent gene |
AT1G17840 |
Parent gene annotation |
ABC transporter G family member 11 |
Parent gene strand |
+ |
Alternative splicing |
NA |
Support reads |
33 |
Tissues |
whole_plant, leaf |
Exon boundary |
Yes-Yes
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
Splicing signals |
GT-AG
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
Number of exons covered |
AT1G17840.1:1
|