Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d020727_circ_g.1 |
ID in PlantcircBase | zma_circ_002546 |
Alias | circ1194 |
Organism | Zea mays |
Position | chr7: 130348473-130350828 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d020727 |
Parent gene annotation |
ARP protein (REF) |
Parent gene strand | + |
Alternative splicing | Zm00001d020727_circ_ag.1 Zm00001d020727_circ_g.2 Zm00001d020727_circ_g.3 Zm00001d020727_circ_g.4 |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d020727_T017:3 Zm00001d020727_T004:3 Zm00001d020727_T021:1 Zm00001d020727_T015:2 Zm00001d020727_T002:1 Zm00001d020727_T011:2 Zm00001d020727_T009:3 Zm00001d020727_T013:2 Zm00001d020727_T007:3 Zm00001d020727_T016:3 Zm00001d020727_T005:3 Zm00001d020727_T018:3 Zm00001d020727_T020:1 Zm00001d020727_T003:2 Zm00001d020727_T014:3 Zm00001d020727_T010:2 Zm00001d020727_T008:2 Zm00001d020727_T012:3 Zm00001d020727_T006:3 Zm00001d020727_T001:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.036963734 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |