Splice junction sequence |
TTTATAGGTTCATAATGATGATGAGGTTAGGGCTCTATTCAAGCAAGTTCAGGGTGAGGTCCCA GGCTCACCAATATTCATAATGAAGGTTGCGTCACAGatggctgaagtaacacgcgtggatgcag tttggcctggttggggtcatgcatctgaaaaccccgaattacctgatgccctagatgcaaaagg aatcatat
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 462 Transcript exons: 13534689-13534895,13534982-13535143,13535225-13535317 ATGGCTGAAGTAACACGCGTGGATGCAGTTTGGCCTGGTTGGGGTCATGCATCTGAAAACCCCG AATTACCTGATGCCCTAGATGCAAAAGGAATCATATTTCTTGGTCCTCCAGCATCTTCAATGGC AGCACTGGGAGATAAGATTGGTTCTTCGTTGATTGCACAAGCTGCTGATGTACCCACTCTGCCA TGGAGTGGTTCCCATGTTAAAATACCTCCTAATAGCAACTTGGTAACCATCCCAGAGGAGATCT ACCGGCAAGCATGTGTCTACACAACTGAAGAAGCGATTGCTAGCTGTCAAGTTGTCGGTTACCC AGCAATGATCAAAGCATCGTGGGGTGGTGGTGGTAAAGGAATCAGGAAGGTTCATAATGATGAT GAGGTTAGGGCTCTATTCAAGCAAGTTCAGGGTGAGGTCCCAGGCTCACCAATATTCATAATGA AGGTTGCGTCACAG
Transcript length: 467 Transcript exons: 13534689-13534721,13534756-13534856,13534869-13534897,13 534982-13535142,13535175-13535317 ATGGCTGAAGTAACACGCGTGGATGCAGTTTGGTACCTGATGCCCTAGATGCAAAAGGAATCAT ATTTCTTGGTCCTCCAGCATCTTCAATGGCAGCACTGGGAGATAAGATTGGTTCTTCGTTGATT GCACAACCCACTCTGCCATGGAGTGGTTCCCATGTGTTAAAATACCTCCTAATAGCAACTTGGT AACCATCCCAGAGGAGATCTACCGGCAAGCATGTGTCTACACAACTGAAGAAGCGATTGCTAGC TGTCAAGTTGTCGGTTACCCAGCAATGATCAAAGCATCGTGGGGTGGTGGTGGTAAAGGAATCA GGAAGGACTAAGCCGATTACTATATAAGTACTTATTCTGGTTTTAAATTTATAGGTTCATAATG ATGATGAGGTTAGGGCTCTATTCAAGCAAGTTCAGGGTGAGGTCCCAGGCTCACCAATATTCAT AATGAAGGTTGCGTCACAG
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Genomic sequence |
ATGGCTGAAGTAACACGCGTGGATGCAGTTTGGCCTGGTTGGGGTCATGCATCTGAAAACCCCG AATTACCTGATGCCCTAGATGCAAAAGGAATCATATTTCTTGGTCCTCCAGCATCTTCAATGGC AGCACTGGGAGATAAGATTGGTTCTTCGTTGATTGCACAAGCTGCTGATGTACCCACTCTGCCA TGGAGTGGTTCCCATGTAAGTAAATTTACTCTTGTTAAGCTTAGCTTGTGTACCAGAGGTATAT ATTTTCATTTTTATATACTGAATTCCTATGTTTTCAGGTTAAAATACCTCCTAATAGCAACTTG GTAACCATCCCAGAGGAGATCTACCGGCAAGCATGTGTCTACACAACTGAAGAAGCGATTGCTA GCTGTCAAGTTGTCGGTTACCCAGCAATGATCAAAGCATCGTGGGGTGGTGGTGGTAAAGGAAT CAGGAAGGTCAGCTTCTGTAGATATGCCTTTTGATTGTGGACTAAGCCGATTACTATATAAGTA CTTATTCTGGTTTTAAATTTATAGGTTCATAATGATGATGAGGTTAGGGCTCTATTCAAGCAAG TTCAGGGTGAGGTCCCAGGCTCACCAATATTCATAATGAAGGTTGCGTCACAG |