Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d021488_circ_g.1 |
ID in PlantcircBase | zma_circ_002580 |
Alias | circ1614 |
Organism | Zea mays |
Position | chr7: 153836271-153836659 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d021488 |
Parent gene annotation |
MYND finger family protein |
Parent gene strand | + |
Alternative splicing | Zm00001d021488_circ_g.2 |
Support reads | 61 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d021488_T008:3 Zm00001d021488_T014:3 Zm00001d021488_T001:3 Zm00001d021488_T004:3 Zm00001d021488_T006:3 Zm00001d021488_T010:3 Zm00001d021488_T011:3 Zm00001d021488_T005:3 Zm00001d021488_T019:3 Zm00001d021488_T002:3 Zm00001d021488_T018:3 Zm00001d021488_T003:3 Zm00001d021488_T007:3 Zm00001d021488_T017:3 Zm00001d021488_T013:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.048851328 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |