Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G01060_circ_g.6 |
ID in PlantcircBase | ath_circ_000012 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 37373-37777 JBrowse» |
Reference genome | TAIR10.38 |
Type | u-circRNA |
Identification method | PcircRNA_finder |
Parent gene | AT1G01060 |
Parent gene annotation |
LHY1 |
Parent gene strand | - |
Alternative splicing | AT1G01060_circ_g.7 |
Support reads | 1 |
Tissues | leaf |
Exon boundary | Yes-No |
Splicing signals | CT-AC |
Number of exons covered | AT1G01060.7:2 AT1G01060.6:1 AT1G01060.3:2 AT1G01060.4:2 AT1G01060.5:1 AT1G01060.1:2 AT1G01060.2:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.229716584 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |