Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Solyc10g006480.1_circ_g.1 |
ID in PlantcircBase | sly_circ_003780 |
Alias | sly_circ_3485 |
Organism | Solanum lycopersicum |
Position | chr10: 1072443-1072671 JBrowse» |
Reference genome | SL2.50.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | Solyc10g006480.1 |
Parent gene annotation |
Polyubiquitin 14 |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | NA |
Tissues | root |
Exon boundary | No-No |
Splicing signals | CT-AA |
Number of exons covered | Solyc10g006480.1.1:1 |
Conservation Information | |
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Conserved circRNAs |
zma_circ_008310 zma_circ_004733 zma_circ_008309 csa_circ_000223 |
PMCS | 1.027172185 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | salt-responsive |
Other Information | |
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References | Wang et al., 2021 |