Plant Circular RNA Database

Detail information of Zm00001d002688_circ_g.1

			
						 General Information
					
						CircRNA Name
						Zm00001d002688_circ_g.1
					
						ID in PlantcircBase
						zma_circ_007088
					
						Alias
						Zm02circ00023, zma_circ_0000683, ZmciR102
					
						Organism
						
							Zea mays						
					
						Position
						
							chr2: 19322438-19325981  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRI2, find_circ
					
						Parent gene
						
							Zm00001d002688						
					
						Parent gene annotation
						
							Mitogen-activated protein kinase kinase kinase YODA
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d002688_circ_igg.1 Zm00001d002688_circ_g.2 Zm00001d002688_circ_igg.3 Zm00001d002688_circ_igg.4 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d002688_T002:6
Zm00001d002688_T006:6
Zm00001d002688_T004:6
Zm00001d002688_T001:6
Zm00001d002688_T003:7

General Information
CircRNA Name	Zm00001d002688_circ_g.1
ID in PlantcircBase	zma_circ_007088
Alias	Zm02circ00023, zma_circ_0000683, ZmciR102
Organism	Zea mays
Position	chr2: 19322438-19325981 JBrowse»
Reference genome	AGPv4.38
Type	ue-circRNA
Identification method	CIRI2, find_circ
Parent gene	Zm00001d002688
Parent gene annotation	Mitogen-activated protein kinase kinase kinase YODA
Parent gene strand	+
Alternative splicing	Zm00001d002688_circ_igg.1 Zm00001d002688_circ_g.2 Zm00001d002688_circ_igg.3 Zm00001d002688_circ_igg.4
Support reads	NA
Tissues	leaf, endosperm, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d002688_T002:6 Zm00001d002688_T006:6 Zm00001d002688_T004:6 Zm00001d002688_T001:6 Zm00001d002688_T003:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GTGTGTGCTATCAATAATTTGTAGGGACATCAAAGGTGCCAACATACTAGTAAATCCAAGTGGC
CGTGTTAAGCTTGCAGACTTTGGAATGGCAAAACATcctttgaggcagagaaggtgtcaacttt
gtttccatttgattggatattgtctttacgatcattgctagtgtattatgattttatgaaagat
gatggtac

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1914
Transcript exons: 19322438-19323219,19323340-19324083,19325148-19325235,19
325340-19325402,19325643-19325803,19325906-19325981
CCTTTGAGGCAGAGAAGGTGTCAACTTTGTTTCCATTTGATTGGATATTGTCTTTACGATCATT
GCTAGTGTATTATGATTTTATGAAAGATGATGGTACTATGTGAGGTCAAATGAAAGTTATGATA
TGCCTTCCTTCTGATGGCCAGAATATGTTAATTGATCAGTTTGGATACCATTGCGATAAGTAGC
TGTCTAGATACACCAGTACCCACAAATTCTCTCACACCCAATATGCCGACATGGTGGGGTAAAT
CATCGTCAAAAGATGTTAAGAAAACCACCAAGGAAAACCTGATCGATACATTTCATCGCTTGAT
AAGTCCAAATGAGCAAAAGGGAAGCACAAAATCAAAACGGAATTGCAGGCGTGGCAATAATACA
GCTGCTGAGAAAGTTTGCAAATCAACAACAGTGTCACGTCCAACTTCTCCATCGAAAGAAGTTT
CTCGCTGCCAAAGTTTTTCGGCTGATAGGCTGCATGCCCAGCCACTTCCTATTCCTGGAGTACG
CCCTCGAGTAACTCGTGCAGTTGCTGATGTCAATGTTTCAAAGCCCATATTGGAAAAACGTGGC
AAACCTCCACTGCTTTTGCCACTTCCTAAACCCAATCCACTTCACCGGGGACCTGGAAGCAGTG
ATATTCCTTCAGAAATAGTGGTTGCTTCTGTCTCTAGCAATTGTTCTGCTGATAGTGAGGATCG
TGCAGATTCTCAGCTTCAGAGCCCTGTTGGGAATGATACTAACAATGTAAAAAAGGTTTCTTCA
AAGAACAAGTCAAGTAATGTTTGCAAGGATCACTCTGGTGCTATTACTACCAAGACCACGAAAG
AAATATTGAAGCCAGCTGCTAATGCATTCCTCAGTAACCATACACAGTCCGCGCCACCAAGAGG
TATCTCAGCTGACAATAATCAACTAAATTTACAAAATCCCCAGCCAGTAGTTTTTGAGAGTGCT
CCCAATAGTTTGATGTCAAGTCCTTCGAGAAGTCCAAGACCAATATGTCCTGATCATATTCTGA
CTTCAGCATTTTGGGCAGTGAAGCCTCATGCTGATGTAACTTTCCTTGGATCTGGTCAGTGCTC
CAGTCCAGGTTCAGGACAAACATCTGGACATAATTCAGTGGGTGGTGATATGCTATCCCAGCTT
TTTTTGCAGCCCACCAGAGGTAGTCCAGAGTGTTCACCAGTTCCTAGCCCAAGAATGACAAGTC
CTGGTCCTAGTTCTCGTGTGCACAGTGGAAGTGTTTCCCCATTGCATCCAAGGTCTGGAGGACT
GGCACCTGAATCTCCTACAAGTCGGCATGATGGTGGAAAGAAGAAGCAAACCCATAAATTGCCC
CTTCCACCATTGAGCATCGCTCACAGTCCATTTTTTCCGAATAACTCGACACCAAGTAGTCCTA
TTTCAGTACCCCGTAGCCCTGGCAGAACAGAGAATCCATCAAGTCCTGCATCGCGATGGAAGAA
GGGCAAGCTGATTGGTCGTGGGACATCTGGTCATGTATATGTTGGCTTCAACAGTGATAGTGGT
GAAATGTGCGCAATGAAAGAGGTTACCCTATTCTTGGATGATCCTAAATCAAAGGAGAGTGCAA
AGCAATTGGGGCAGGAAATATCACTCTTGAGTCGCTTACGACATCCAAATATTGTACAATACTA
TGGATCAGAAATGGTTGAAGATAAACTTTACATATATTTGGAATATGTTTCTGGTGGATCCATA
CATAAACTTCTACAAGAATATGGACAGCTTGGTGAACCAGCAATACGCAGCTACACCCTTCAGA
TACTTTCAGGCTTAGCTTATTTGCATGCCAAGAATACGGTCCACAGGGACATCAAAGGTGCCAA
CATACTAGTAAATCCAAGTGGCCGTGTTAAGCTTGCAGACTTTGGAATGGCAAAACAT
						
					

						Genomic sequence
						
							CCTTTGAGGCAGAGAAGGTGTCAACTTTGTTTCCATTTGATTGGATATTGTCTTTACGATCATT
GCTAGTGTATTATGATTTTATGAAAGATGATGGTACTATGTGAGGTCAAATGAAAGTTATGATA
TGCCTTCCTTCTGATGGCCAGAATATGTTAATTGATCAGTTTGGATACCATTGCGATAAGTAGC
TGTCTAGATACACCAGTACCCACAAATTCTCTCACACCCAATATGCCGACATGGTGGGGTAAAT
CATCGTCAAAAGATGTTAAGAAAACCACCAAGGAAAACCTGATCGATACATTTCATCGCTTGAT
AAGTCCAAATGAGCAAAAGGGAAGCACAAAATCAAAACGGAATTGCAGGCGTGGCAATAATACA
GCTGCTGAGAAAGTTTGCAAATCAACAACAGTGTCACGTCCAACTTCTCCATCGAAAGAAGTTT
CTCGCTGCCAAAGTTTTTCGGCTGATAGGCTGCATGCCCAGCCACTTCCTATTCCTGGAGTACG
CCCTCGAGTAACTCGTGCAGTTGCTGATGTCAATGTTTCAAAGCCCATATTGGAAAAACGTGGC
AAACCTCCACTGCTTTTGCCACTTCCTAAACCCAATCCACTTCACCGGGGACCTGGAAGCAGTG
ATATTCCTTCAGAAATAGTGGTTGCTTCTGTCTCTAGCAATTGTTCTGCTGATAGTGAGGATCG
TGCAGATTCTCAGCTTCAGAGCCCTGTTGGGAATGATACTAACAATGTAAAAAAGGTTTCTTCA
AAGAACAAGTCAAGGTACTCTCCTGAGGCCAAAAACATCACTTCTATATTCAATTTCTATATTC
CAGGCCGTCATATTATTTGTGTGCCTCTCCATCTAAACATGTTCTAATATTTCCTTTTCTCTTT
CTGAAGTAATGTTTGCAAGGATCACTCTGGTGCTATTACTACCAAGACCACGAAAGAAATATTG
AAGCCAGCTGCTAATGCATTCCTCAGTAACCATACACAGTCCGCGCCACCAAGAGGTATCTCAG
CTGACAATAATCAACTAAATTTACAAAATCCCCAGCCAGTAGTTTTTGAGAGTGCTCCCAATAG
TTTGATGTCAAGTCCTTCGAGAAGTCCAAGACCAATATGTCCTGATCATATTCTGACTTCAGCA
TTTTGGGCAGTGAAGCCTCATGCTGATGTAACTTTCCTTGGATCTGGTCAGTGCTCCAGTCCAG
GTTCAGGACAAACATCTGGACATAATTCAGTGGGTGGTGATATGCTATCCCAGCTTTTTTTGCA
GCCCACCAGAGGTAGTCCAGAGTGTTCACCAGTTCCTAGCCCAAGAATGACAAGTCCTGGTCCT
AGTTCTCGTGTGCACAGTGGAAGTGTTTCCCCATTGCATCCAAGGTCTGGAGGACTGGCACCTG
AATCTCCTACAAGTCGGCATGATGGTGGAAAGAAGAAGCAAACCCATAAATTGCCCCTTCCACC
ATTGAGCATCGCTCACAGTCCATTTTTTCCGAATAACTCGACACCAAGTAGTCCTATTTCAGTA
CCCCGTAGCCCTGGCAGAACAGAGAATCCATCAAGTCCTGCATCGCGATGGAAGAAGGGCAAGC
TGATTGGTCGTGGGACATCTGGTCATGTATATGTTGGCTTCAACAGGTATTTGTTTTCCTATGT
ATGAATTTCAAATGTGAAGTTTGTATTTTCTATAAATATATGTTTTAGTCATCTTTACAAGCTT
TTGGGGTTGTTTTTGGTCAACTCACTTTCCTCTATTCTAATTATCCCACTTTGAAACGACCTTG
TTTGACTCAATGTTTCCCAGAAATGATACAACAATATTTGACCAATATATACTTGTTTGCTAAC
TTTCCTTACAAGAGAATAGACTAGGTAGGTAGTATATTCACGTACCTTTATGGTGTAAGGTGTA
TTGTGCTCTGTTTTCCTCTTGAAAGCTGGCAACACATTTTCTTTTCTGAGAAGAGACAGATTAC
ACCTACCTCATCTTGTGTACGGCCGCACTTTACAAGTCTCAAATGGTTATTTTCCTTTGCCACT
AAGATTAAGAGAGGGTGTTCATATTGTACTTCCTGTTTATTGTGCAAAGTGCAAACGACTTTGT
TGAGGTAGAAACAGCAAAAAGGGGCATTTTGCATCTTGTACTTCCTGTTAATACGGCATAGATC
CAAAGCATAAAATGTAAAAGAACATATCATGCAGTGAATAAAACTAGTTAGAACCATAACACTA
TATTTCTTGCATAAAAATTGTGAGTGCCATACCGCTCTGCATAATTGTTGGCATAATTGCATTC
TAGCAGTGAGAGATGACAGTTAAAAGACAACTCATGTTGATGGTAAAGTTACATATAGTCATAG
GACACTGAAAACTACATGTCCTATTGTGTTTAAAAGACCTAATGGTCCAAATAAAGTCAAGAGA
ATTTAGTTTATTTTTTAAAATAGCCTGTTCGGCTGCGGCGATAAGCGCTGCTACACAGTCAGCA
TACAGTGTTTGTGTCATGCCTGATGCAGCAGCCGCAGCCACAGCATCGCGTTGTCGAGAAGCCA
AACATTGATCATTGTTTTGAACAATAGGATAGTGTGTTTCAATTGATATAATCCACTTTCCATT
TGAGCAATTTTCAAATCATGCTTAAGTTTCCGCAAACCTTTGCTTTGTATACCCTATCTTGATA
CCATCATCTGTATTACTATTAGTGATAGTGGTGAAATGTGCGCAATGAAAGAGGTTACCCTATT
CTTGGATGATCCTAAATCAAAGGAGAGTGCAAAGCAATTGGGGCAGGTATGTTATTTCAGATGT
GTTGTGCACCACCTGCAAAAATTTAGTTTATAAGCTGTGTTTATTGTTTTACGTTATCTTTTAT
CTTTGCCCTTTCCGTTTAACAGGAAATATCACTCTTGAGTCGCTTACGACATCCAAATATTGTA
CAATACTATGGATCAGAAATGGTATAAAGTGTTTCCTTCAATATGTACACTTGGTTTTTCTTGC
TTCCTTAATGCTTCTGCTGTTCCTGCAATTTCAGAAGATTGTATTTGTTATTTAATCTTACTTT
TTTTTACCCTTTTCCCTTCAGCAAGGGTGATAAGAGAGTTCACAACAGCTTGTCACATATCATT
AATAGGGTTATGGATGCATTATTTTCATTTTTAGGCATGAACTTATACATTATGTTTGCCCAAA
ATTAGGTTGAAGATAAACTTTACATATATTTGGAATATGTTTCTGGTGGATCCATACATAAACT
TCTACAAGAATATGGACAGCTTGGTGAACCAGCAATACGCAGCTACACCCTTCAGATACTTTCA
GGCTTAGCTTATTTGCATGCCAAGAATACGGTCCACAGGTAGAATTTCATTTTTTTTGGGTTCA
ATCTTTTGGGTTGCACATTCAGCAAATGACATCTATTTTTGCTTTTGCTTTTGTGTGTGCTATC
AATAATTTGTAGGGACATCAAAGGTGCCAACATACTAGTAAATCCAAGTGGCCGTGTTAAGCTT
GCAGACTTTGGAATGGCAAAACAT
						
					

			
		

Sequences
Splice junction sequence	GTGTGTGCTATCAATAATTTGTAGGGACATCAAAGGTGCCAACATACTAGTAAATCCAAGTGGC CGTGTTAAGCTTGCAGACTTTGGAATGGCAAAACATcctttgaggcagagaaggtgtcaacttt gtttccatttgattggatattgtctttacgatcattgctagtgtattatgattttatgaaagat gatggtac
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1914 Transcript exons: 19322438-19323219,19323340-19324083,19325148-19325235,19 325340-19325402,19325643-19325803,19325906-19325981 CCTTTGAGGCAGAGAAGGTGTCAACTTTGTTTCCATTTGATTGGATATTGTCTTTACGATCATT GCTAGTGTATTATGATTTTATGAAAGATGATGGTACTATGTGAGGTCAAATGAAAGTTATGATA TGCCTTCCTTCTGATGGCCAGAATATGTTAATTGATCAGTTTGGATACCATTGCGATAAGTAGC TGTCTAGATACACCAGTACCCACAAATTCTCTCACACCCAATATGCCGACATGGTGGGGTAAAT CATCGTCAAAAGATGTTAAGAAAACCACCAAGGAAAACCTGATCGATACATTTCATCGCTTGAT AAGTCCAAATGAGCAAAAGGGAAGCACAAAATCAAAACGGAATTGCAGGCGTGGCAATAATACA GCTGCTGAGAAAGTTTGCAAATCAACAACAGTGTCACGTCCAACTTCTCCATCGAAAGAAGTTT CTCGCTGCCAAAGTTTTTCGGCTGATAGGCTGCATGCCCAGCCACTTCCTATTCCTGGAGTACG CCCTCGAGTAACTCGTGCAGTTGCTGATGTCAATGTTTCAAAGCCCATATTGGAAAAACGTGGC AAACCTCCACTGCTTTTGCCACTTCCTAAACCCAATCCACTTCACCGGGGACCTGGAAGCAGTG ATATTCCTTCAGAAATAGTGGTTGCTTCTGTCTCTAGCAATTGTTCTGCTGATAGTGAGGATCG TGCAGATTCTCAGCTTCAGAGCCCTGTTGGGAATGATACTAACAATGTAAAAAAGGTTTCTTCA AAGAACAAGTCAAGTAATGTTTGCAAGGATCACTCTGGTGCTATTACTACCAAGACCACGAAAG AAATATTGAAGCCAGCTGCTAATGCATTCCTCAGTAACCATACACAGTCCGCGCCACCAAGAGG TATCTCAGCTGACAATAATCAACTAAATTTACAAAATCCCCAGCCAGTAGTTTTTGAGAGTGCT CCCAATAGTTTGATGTCAAGTCCTTCGAGAAGTCCAAGACCAATATGTCCTGATCATATTCTGA CTTCAGCATTTTGGGCAGTGAAGCCTCATGCTGATGTAACTTTCCTTGGATCTGGTCAGTGCTC CAGTCCAGGTTCAGGACAAACATCTGGACATAATTCAGTGGGTGGTGATATGCTATCCCAGCTT TTTTTGCAGCCCACCAGAGGTAGTCCAGAGTGTTCACCAGTTCCTAGCCCAAGAATGACAAGTC CTGGTCCTAGTTCTCGTGTGCACAGTGGAAGTGTTTCCCCATTGCATCCAAGGTCTGGAGGACT GGCACCTGAATCTCCTACAAGTCGGCATGATGGTGGAAAGAAGAAGCAAACCCATAAATTGCCC CTTCCACCATTGAGCATCGCTCACAGTCCATTTTTTCCGAATAACTCGACACCAAGTAGTCCTA TTTCAGTACCCCGTAGCCCTGGCAGAACAGAGAATCCATCAAGTCCTGCATCGCGATGGAAGAA GGGCAAGCTGATTGGTCGTGGGACATCTGGTCATGTATATGTTGGCTTCAACAGTGATAGTGGT GAAATGTGCGCAATGAAAGAGGTTACCCTATTCTTGGATGATCCTAAATCAAAGGAGAGTGCAA AGCAATTGGGGCAGGAAATATCACTCTTGAGTCGCTTACGACATCCAAATATTGTACAATACTA TGGATCAGAAATGGTTGAAGATAAACTTTACATATATTTGGAATATGTTTCTGGTGGATCCATA CATAAACTTCTACAAGAATATGGACAGCTTGGTGAACCAGCAATACGCAGCTACACCCTTCAGA TACTTTCAGGCTTAGCTTATTTGCATGCCAAGAATACGGTCCACAGGGACATCAAAGGTGCCAA CATACTAGTAAATCCAAGTGGCCGTGTTAAGCTTGCAGACTTTGGAATGGCAAAACAT
Genomic sequence	CCTTTGAGGCAGAGAAGGTGTCAACTTTGTTTCCATTTGATTGGATATTGTCTTTACGATCATT GCTAGTGTATTATGATTTTATGAAAGATGATGGTACTATGTGAGGTCAAATGAAAGTTATGATA TGCCTTCCTTCTGATGGCCAGAATATGTTAATTGATCAGTTTGGATACCATTGCGATAAGTAGC TGTCTAGATACACCAGTACCCACAAATTCTCTCACACCCAATATGCCGACATGGTGGGGTAAAT CATCGTCAAAAGATGTTAAGAAAACCACCAAGGAAAACCTGATCGATACATTTCATCGCTTGAT AAGTCCAAATGAGCAAAAGGGAAGCACAAAATCAAAACGGAATTGCAGGCGTGGCAATAATACA GCTGCTGAGAAAGTTTGCAAATCAACAACAGTGTCACGTCCAACTTCTCCATCGAAAGAAGTTT CTCGCTGCCAAAGTTTTTCGGCTGATAGGCTGCATGCCCAGCCACTTCCTATTCCTGGAGTACG CCCTCGAGTAACTCGTGCAGTTGCTGATGTCAATGTTTCAAAGCCCATATTGGAAAAACGTGGC AAACCTCCACTGCTTTTGCCACTTCCTAAACCCAATCCACTTCACCGGGGACCTGGAAGCAGTG ATATTCCTTCAGAAATAGTGGTTGCTTCTGTCTCTAGCAATTGTTCTGCTGATAGTGAGGATCG TGCAGATTCTCAGCTTCAGAGCCCTGTTGGGAATGATACTAACAATGTAAAAAAGGTTTCTTCA AAGAACAAGTCAAGGTACTCTCCTGAGGCCAAAAACATCACTTCTATATTCAATTTCTATATTC CAGGCCGTCATATTATTTGTGTGCCTCTCCATCTAAACATGTTCTAATATTTCCTTTTCTCTTT CTGAAGTAATGTTTGCAAGGATCACTCTGGTGCTATTACTACCAAGACCACGAAAGAAATATTG AAGCCAGCTGCTAATGCATTCCTCAGTAACCATACACAGTCCGCGCCACCAAGAGGTATCTCAG CTGACAATAATCAACTAAATTTACAAAATCCCCAGCCAGTAGTTTTTGAGAGTGCTCCCAATAG TTTGATGTCAAGTCCTTCGAGAAGTCCAAGACCAATATGTCCTGATCATATTCTGACTTCAGCA TTTTGGGCAGTGAAGCCTCATGCTGATGTAACTTTCCTTGGATCTGGTCAGTGCTCCAGTCCAG GTTCAGGACAAACATCTGGACATAATTCAGTGGGTGGTGATATGCTATCCCAGCTTTTTTTGCA GCCCACCAGAGGTAGTCCAGAGTGTTCACCAGTTCCTAGCCCAAGAATGACAAGTCCTGGTCCT AGTTCTCGTGTGCACAGTGGAAGTGTTTCCCCATTGCATCCAAGGTCTGGAGGACTGGCACCTG AATCTCCTACAAGTCGGCATGATGGTGGAAAGAAGAAGCAAACCCATAAATTGCCCCTTCCACC ATTGAGCATCGCTCACAGTCCATTTTTTCCGAATAACTCGACACCAAGTAGTCCTATTTCAGTA CCCCGTAGCCCTGGCAGAACAGAGAATCCATCAAGTCCTGCATCGCGATGGAAGAAGGGCAAGC TGATTGGTCGTGGGACATCTGGTCATGTATATGTTGGCTTCAACAGGTATTTGTTTTCCTATGT ATGAATTTCAAATGTGAAGTTTGTATTTTCTATAAATATATGTTTTAGTCATCTTTACAAGCTT TTGGGGTTGTTTTTGGTCAACTCACTTTCCTCTATTCTAATTATCCCACTTTGAAACGACCTTG TTTGACTCAATGTTTCCCAGAAATGATACAACAATATTTGACCAATATATACTTGTTTGCTAAC TTTCCTTACAAGAGAATAGACTAGGTAGGTAGTATATTCACGTACCTTTATGGTGTAAGGTGTA TTGTGCTCTGTTTTCCTCTTGAAAGCTGGCAACACATTTTCTTTTCTGAGAAGAGACAGATTAC ACCTACCTCATCTTGTGTACGGCCGCACTTTACAAGTCTCAAATGGTTATTTTCCTTTGCCACT AAGATTAAGAGAGGGTGTTCATATTGTACTTCCTGTTTATTGTGCAAAGTGCAAACGACTTTGT TGAGGTAGAAACAGCAAAAAGGGGCATTTTGCATCTTGTACTTCCTGTTAATACGGCATAGATC CAAAGCATAAAATGTAAAAGAACATATCATGCAGTGAATAAAACTAGTTAGAACCATAACACTA TATTTCTTGCATAAAAATTGTGAGTGCCATACCGCTCTGCATAATTGTTGGCATAATTGCATTC TAGCAGTGAGAGATGACAGTTAAAAGACAACTCATGTTGATGGTAAAGTTACATATAGTCATAG GACACTGAAAACTACATGTCCTATTGTGTTTAAAAGACCTAATGGTCCAAATAAAGTCAAGAGA ATTTAGTTTATTTTTTAAAATAGCCTGTTCGGCTGCGGCGATAAGCGCTGCTACACAGTCAGCA TACAGTGTTTGTGTCATGCCTGATGCAGCAGCCGCAGCCACAGCATCGCGTTGTCGAGAAGCCA AACATTGATCATTGTTTTGAACAATAGGATAGTGTGTTTCAATTGATATAATCCACTTTCCATT TGAGCAATTTTCAAATCATGCTTAAGTTTCCGCAAACCTTTGCTTTGTATACCCTATCTTGATA CCATCATCTGTATTACTATTAGTGATAGTGGTGAAATGTGCGCAATGAAAGAGGTTACCCTATT CTTGGATGATCCTAAATCAAAGGAGAGTGCAAAGCAATTGGGGCAGGTATGTTATTTCAGATGT GTTGTGCACCACCTGCAAAAATTTAGTTTATAAGCTGTGTTTATTGTTTTACGTTATCTTTTAT CTTTGCCCTTTCCGTTTAACAGGAAATATCACTCTTGAGTCGCTTACGACATCCAAATATTGTA CAATACTATGGATCAGAAATGGTATAAAGTGTTTCCTTCAATATGTACACTTGGTTTTTCTTGC TTCCTTAATGCTTCTGCTGTTCCTGCAATTTCAGAAGATTGTATTTGTTATTTAATCTTACTTT TTTTTACCCTTTTCCCTTCAGCAAGGGTGATAAGAGAGTTCACAACAGCTTGTCACATATCATT AATAGGGTTATGGATGCATTATTTTCATTTTTAGGCATGAACTTATACATTATGTTTGCCCAAA ATTAGGTTGAAGATAAACTTTACATATATTTGGAATATGTTTCTGGTGGATCCATACATAAACT TCTACAAGAATATGGACAGCTTGGTGAACCAGCAATACGCAGCTACACCCTTCAGATACTTTCA GGCTTAGCTTATTTGCATGCCAAGAATACGGTCCACAGGTAGAATTTCATTTTTTTTGGGTTCA ATCTTTTGGGTTGCACATTCAGCAAATGACATCTATTTTTGCTTTTGCTTTTGTGTGTGCTATC AATAATTTGTAGGGACATCAAAGGTGCCAACATACTAGTAAATCCAAGTGGCCGTGTTAAGCTT GCAGACTTTGGAATGGCAAAACAT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.123779097

Conservation Information
Conserved circRNAs	NA
PMCS	0.123779097

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							19322673-19322503(+)
19322502-19325930(-)
						
						Potential amino acid sequence
						
							MPTWWGKSSSKDVKKTTKENLIDTFHRLISPNEQKGSTKSKRNCRRGNNTAAEKVCKSTTVSRP
TSPSKEVSRCQSFSADRLHAQPLPIPGVRPRVTRAVADVNVSKPILEKRGKPPLLLPLPKPNPL
HRGPGSSDIPSEIVVASVSSNCSADSEDRADSQLQSPVGNDTNNVKKVSSKNKSSNVCKDHSGA
ITTKTTKEILKPAANAFLSNHTQSAPPRGISADNNQLNLQNPQPVVFESAPNSLMSSPSRSPRP
ICPDHILTSAFWAVKPHADVTFLGSGQCSSPGSGQTSGHNSVGGDMLSQLFLQPTRGSPECSPV
PSPRMTSPGPSSRVHSGSVSPLHPRSGGLAPESPTSRHDGGKKKQTHKLPLPPLSIAHSPFFPN
NSTPSSPISVPRSPGRTENPSSPASRWKKGKLIGRGTSGHVYVGFNSDSGEMCAMKEVTLFLDD
PKSKESAKQLGQEISLLSRLRHPNIVQYYGSEMVEDKLYIYLEYVSGGSIHKLLQEYGQLGEPA
IRSYTLQILSGLAYLHAKNTVHRDIKGANILVNPSGRVKLADFGMAKHPLRQRRCQLCFHLIGY
CLYDHC*(+)
MIVKTISNQMETKLTPSLPQRMFCHSKVCKLNTATWIY*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to drought stress

Functional Information
Coding potential	Y
Potential coding position	19322673-19322503(+) 19322502-19325930(-)
Potential amino acid sequence	MPTWWGKSSSKDVKKTTKENLIDTFHRLISPNEQKGSTKSKRNCRRGNNTAAEKVCKSTTVSRP TSPSKEVSRCQSFSADRLHAQPLPIPGVRPRVTRAVADVNVSKPILEKRGKPPLLLPLPKPNPL HRGPGSSDIPSEIVVASVSSNCSADSEDRADSQLQSPVGNDTNNVKKVSSKNKSSNVCKDHSGA ITTKTTKEILKPAANAFLSNHTQSAPPRGISADNNQLNLQNPQPVVFESAPNSLMSSPSRSPRP ICPDHILTSAFWAVKPHADVTFLGSGQCSSPGSGQTSGHNSVGGDMLSQLFLQPTRGSPECSPV PSPRMTSPGPSSRVHSGSVSPLHPRSGGLAPESPTSRHDGGKKKQTHKLPLPPLSIAHSPFFPN NSTPSSPISVPRSPGRTENPSSPASRWKKGKLIGRGTSGHVYVGFNSDSGEMCAMKEVTLFLDD PKSKESAKQLGQEISLLSRLRHPNIVQYYGSEMVEDKLYIYLEYVSGGSIHKLLQEYGQLGEPA IRSYTLQILSGLAYLHAKNTVHRDIKGANILVNPSGRVKLADFGMAKHPLRQRRCQLCFHLIGY CLYDHC(+) MIVKTISNQMETKLTPSLPQRMFCHSKVCKLNTATWIY(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to drought stress

			
						 Other Information
					
						References
						Han et al., 2020; Ma et al., 2021b;Zhang et al., 2019

circRNA

Detail information of Zm00001d002688_circ_g.1

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