Plant Circular RNA Database

Detail information of Os01g0108200_circ_g.4

			
						 General Information
					
						CircRNA Name
						Os01g0108200_circ_g.4
					
						ID in PlantcircBase
						osa_circ_000097
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr1: 442605-447469  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os01g0108200						
					
						Parent gene annotation
						
							Similar to Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cle
aving enzyme) (PE). (Os01t0108200-01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os01g0108200_circ_igg.1 Os01g0108200_circ_g.1 Os01g0108200_circ_g.2 Os01g0108200_circ_g.3 Os01g0108200_circ_g.5 						
					
						Support reads
						2
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os01t0108200-01:8

General Information
CircRNA Name	Os01g0108200_circ_g.4
ID in PlantcircBase	osa_circ_000097
Alias	NA
Organism	Oryza sativa
Position	chr1: 442605-447469 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os01g0108200
Parent gene annotation	Similar to Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cle aving enzyme) (PE). (Os01t0108200-01)
Parent gene strand	+
Alternative splicing	Os01g0108200_circ_igg.1 Os01g0108200_circ_g.1 Os01g0108200_circ_g.2 Os01g0108200_circ_g.3 Os01g0108200_circ_g.5
Support reads	2
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os01t0108200-01:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GCAAAGTTTTGTTAACTGTTGTCAGTACCCAGCAATCATGCTGTTGACTGCTGATCATGATGAT
CGTGTTGTGCCATTGCACTCATTGAAGTTGTTAGCAgatagtttggatggagaggcggaggttc
ttctggatccaaatgcactaagcaaggatgggacagttgctctttcgacgtattctgttagcaa
ggatggca

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GATAGTTTGGATGGAGAGGCGGAGGTTCTTCTGGATCCAAATGCACTAAGCAAGGATGGGACAG
TTGCTCTTTCGACGTATTCTGTTAGCAAGGATGGCAAATACATAGCTTATGGCCTAAGTGAAAG
TGGCAGTGATTGGGTCACTATTCGTGTGATGAACATTGCTGATAAGCAGACTTTGTCTGACAAA
TTGTCTTGGGTGAGCAGATGCAGCTTGTAACTATTATTTGAAATTGTAGTGCTTATGTGTTACC
TATTGGTTCTTATAACCAAATCCAACATATATGTTCCATCAATTATTGGTGCAGGTGAAATTCT
CATCTATCAGTTGGACCCATGATGGAAAAGGTTTTTTCTATGGTCGATACCCTGCACCCCGGTA
GGTTTACAAACTTCTGTATTTCTAATGTACTGTAATAGATTGCTTAGTTTCTCTTACTCCTTTT
GTTAGAGAAGTGGAATTGGATGCTGGAACTGAAACAAACATTAATCTTAATCATGAGATATATT
ACCATGTCGTGGGATCTGATCAGTCCGAAGATATATTATGCTGGAAAGATCCTGAACACCCTAA
GTATTCCTTTGGTGCATCGGTCACAGAGGATGGAAAGGTAACAACACTTCCTCTCCTTCCCATT
TGTGTACCAGTCATATCTATATGCTTATTTACTTCTTTCATCTTTTGGATGAGACTACAAACTT
GATTTCTCTTCTTCTATGGTTGATGCTTCATCTTCTAGTTTAAATGACAGTACAGACAATTTTA
CTACCTGAACTTCTCTCGAAAATATTTTATTCAGTCCCTTGCTTCTGATGGAGCTTCCTGCATT
ATCTAGGATTATCTTAATTTCTCAAGTGCTCACTAGAATATTTGGTGCTTCTTGGCTTTCTACA
TGGCAATAAATATTACATGATCGTATAATGGATTTTCTCAATCAACATGCATGCACTCATAGCA
CTACTTGCAGAGACAACATAATTCAAGTAGTAATAGAGTAAGATAAACATGTTGAAGAAGATCC
ATGCCTTGCTCACAGAGGCCAGCTCCTGTCATGAACCTACAACTCCTTGGAACCTTACATATAC
CTGCTTGTCTAAGTGAACTAAACAACTAATACGAATAAATACTAACAAAACTCAATCTTGTCTA
AGTGAACTAAACAACTAATACGAATAAATACTAACAAAACTCAATCTATCTATCTAAACCTTAC
TAATCGTGCACTTTTTAGGAGCTCTCAAGTCAACCAAAAAGATCTAGCCGTTGATATAATAAAT
CATAACATCACAACCATAGATCGTAATATTTTTAACAGCCACATAAATCGGATCGTAGAATCCT
ATATGGTTTATTAGTAGGAAATATCTCCCATAGATGTATGGTCTTGATGTCCGATCCGACAAAT
TAGGTCCATAGCAAACCAATAAACCGATGGAAGTTACTCCTATCTCCTAATGAATAATCATGCA
TGAATACGTATTGTTGTACAACCCCTGATGCTTGAATACGTATTGATGTCCAGCAAAATAGTAG
ATCCATAGTCATAACAATTAATTTCGGTAATCTCTATCTTTGTGTAGAGAACAAACTATTTCCT
AATTAATCTTCCTCCAAACTAAATAAACATACCATCAAAAATAATATGCACTTCATTTTATTAA
AATTTAGTAACTCCAAAATTCTAGATTAAAAAAATATGATGTTTTTTTTATTTTAATTACGAAA
TTTTGATTTTTTTTTTTTAAATAATATTGAAACTGTACAAGTAAGCTAAAGTTGACGTGCACTT
TTAATCTAAATTACTACAATTTAGAAAATAGCCTGTGTATGTTAAATTCTATATATGTACAATA
TGAATAATAATAATAATAACCCACACAACGCGCAAGTTGATGACTATTATAACTTAAAATTTCT
ACAGTTGCTAGCTCATGGTTATATATGACATGCAAAAAGAATGAATCTTACCTGTCGTCTAAGT
GAAATAAATAGCCAATACGAATAAATACCAAATAGAGCTCAAAATTGCTTGCAATTTTTATAGT
AGCTAGCTCATGGTTTTATGTGAATGAATTGCAGAAAGAACAACTCAAACCCAAGGTCCTGAGC
AAACATTATGGCTATTCAAAGATTTATTTGGCTAAAAGTGCAAAAATGATTGCATATTAGTTTC
GGAATCCTTATTTCATCCGAATTTCAAAATCTCTGTGCAAAGGCTTTATATGATGAGGAGTATA
AAATGCAATGGGCAAACCTGTTTTGAACCACCTGAAATGGAGCTAGCATAAATTAGTTTTGGAG
CTTGAAATTAATTGAATTTCCAATGTGAAAATTATTGATTTTCTGATTTTTGCAAGGGTTGAAT
ATTCCATTGAGTTCATTGCATTAGCATTTCGTGATGGATGTTGCAGTAGAGTGTGATCTTTATG
GTCTACATGTTTGTTGCACCAACCTTAAAAAGCAGAGTATCTCTTCACATCTTTAATTAATGAC
TTTTGTCTAAATCTTTTAATAGCCCACAAAAACAGTTCTCTCATAACCTCATCTTTTGTTGACA
GTACATCATACTAGGTACTTATGAAGGTTGCGATCCTGTCAATAAGCTATACTACTGTGAAATT
TGTACTCTTCCTCAAGGGATAGAGGGGTTCAAAGAGACAAAGGGGATGCTTCCATTTGTCAAGC
TTATAGATAACTTTGATGCCCAATATCATGTTGTGGCAAATGATGGTGATGAATTTACATTTTT
GACCAATAGAAATGCTCCTAAGAACAAGCTTGTAAGAGTAGATATCAAGAAGCCAGAATTGTGG
ACTGATATTCTTCCTGAACATGAAAGAGATGTGCTCGAATCAGCTGACGCGGTTAATGGTAACC
AGTTATTGGTATGTTATATGTCAGATGTTAAGCATATTCTGCAGATAAGAGACCTTGTAACTGG
GAACTTGCTTCATAAGTTGCCTCTAGAAATTGGTTCTGTTTCAGAGATCTCCTGTAGACGGGAA
GACATGGACGTCTTTATTGGCTTCACAAGCTTTCTTTCCCCTGGTATTATTTACAGGTGTAACC
TCACATCTGCGATCCCAGAAATGAAGATATTTCGTGAAATTTCAGTTCCTGGATTTGATCGAAC
AAATTTTGAGGTTAAGCAGGTACATGCCATCACTGTCTTAGGTTGCCATATCATTTTCTATACA
AAGAATACCAATGAAACTAAATACTTCGTTAAAATGTGGTTTCTAACTGTTTTTGGTTTTTCAG
ATTTTCGTCAATAGTAAGGATGGAACCAAAATTCCTATGTTCATAATGTCAAAGAGAGATATTG
AACTTGATGGATCACATCCAACTTTGCTATATGGTTATGGTGGATTCAACATAAGTCTTACTCC
TTCTTTCAGTGTTAGTCGTGTTGTTTTATGCAAGAACATGGGTTTTGTTGTCTGTGTTGCAAAT
ATTCGGGGTGGTGGGGAATATGGGGAAGAGTGGCACAAAGCTGGAGCACGTGCAATGAAACAAA
ATTGTTTTGACGACTTCATTGCTTGTGCTGAACTCCTCATTTCTGCTGGTTATACGAGTTACAG
GCAGTTATGTATTGAAGGTGGAAGCAATGGTGGTCTTCTGATTGCTGCTTGCGTTAATCAGGTC
ATACAGTAAACTCCTGTTTTCTACAATGCTTCTTCAGTCTGTATAAGTTATCTTGTACTCCCTC
AGTAGAAAAAAATATGGGTGATTTTGAAAGTCTTAAAAGACAAGCTTTGATTGTTGATTTCTTA
ATACATATAGAACAAAATTTTATGTAAGCTCTTTGAATATCTATTGATATAGTTCTTTTGCTCG
AAATGCACTTGTTTGACTAGAGTTGTTCAAAATATGAATGTAGTAGTTATGATAGCATACTATT
GTGATGTGGTTATAATATCATCCTATTGTGATATCATGCATAAATTTGATTTCCTGTCTTTCAG
CGGCCTGATCTCTTTGGGTGTGCTCTTGCTCATGTTGGTGTTATGGACATGCTCCGTTTTCACA
AGTTCACCATTGGTATTTCTTTTGTTCTGTTGTGTATCATCTTTGTTTTACCTGTATATTGATG
CATATTATCAGTGAATGCTTCATGTTTTTTTGTAGGTCATGCCTGGACTACCGACTATGGTTGT
TCAGACAATGAAGAGGAATTCCACTGGCTTATCAAGTATGGAATTTCTGTTATTTCCAACACCA
CTTTTACTAGAATATGTGTTTCAGTTATTAGTTCATTACTCCAGTGATTGCTGGTCTAGTGGGC
TATGTAGAATACTGCTACACCACTTTATTCTTGAGGTTTGAAAATTACAATTTCGTAGCTGACA
GTTTCCGAGTTATATGTGCTGTTCAGGTCTTTTAATTGAGAGTCCAGTAGTGCTTAATTATCAT
GTTAATTTCTTCATTTTTCCTGCTTAGTCTGAATATTCCTAGACTAAAATCTTGCATATACGTT
AATCCACTGAGTCCATCATATTTAATTATTTGTGGTGATAATATTTTTCTATCCAATTTTCCGT
CTCGGCAGAAAAAAGGCATCCAGTGTTCCAAAAGAGTCTTTTTAGTCATTCAGTAATAGAGTTC
ATTGTGAACTCTGACCAAGTTGAACCTTCCATTTTCCAAAGTCACGCCATATCTTTTTTCAGTG
TTTTATTAGATGTATTACACATCTATGCTGTACTGATGAGTGGTGAACATGTACTAGATATTCC
CCCCTTCATAATGTGAGGAGACCTTGGGAGCAAAGTTTTGTTAACTGTTGTCAGTACCCAGCAA
TCATGCTGTTGACTGCTGATCATGATGATCGTGTTGTGCCATTGCACTCATTGAAGTTGTTAGC
A
						
					

			
		

Sequences
Splice junction sequence	GCAAAGTTTTGTTAACTGTTGTCAGTACCCAGCAATCATGCTGTTGACTGCTGATCATGATGAT CGTGTTGTGCCATTGCACTCATTGAAGTTGTTAGCAgatagtttggatggagaggcggaggttc ttctggatccaaatgcactaagcaaggatgggacagttgctctttcgacgtattctgttagcaa ggatggca
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GATAGTTTGGATGGAGAGGCGGAGGTTCTTCTGGATCCAAATGCACTAAGCAAGGATGGGACAG TTGCTCTTTCGACGTATTCTGTTAGCAAGGATGGCAAATACATAGCTTATGGCCTAAGTGAAAG TGGCAGTGATTGGGTCACTATTCGTGTGATGAACATTGCTGATAAGCAGACTTTGTCTGACAAA TTGTCTTGGGTGAGCAGATGCAGCTTGTAACTATTATTTGAAATTGTAGTGCTTATGTGTTACC TATTGGTTCTTATAACCAAATCCAACATATATGTTCCATCAATTATTGGTGCAGGTGAAATTCT CATCTATCAGTTGGACCCATGATGGAAAAGGTTTTTTCTATGGTCGATACCCTGCACCCCGGTA GGTTTACAAACTTCTGTATTTCTAATGTACTGTAATAGATTGCTTAGTTTCTCTTACTCCTTTT GTTAGAGAAGTGGAATTGGATGCTGGAACTGAAACAAACATTAATCTTAATCATGAGATATATT ACCATGTCGTGGGATCTGATCAGTCCGAAGATATATTATGCTGGAAAGATCCTGAACACCCTAA GTATTCCTTTGGTGCATCGGTCACAGAGGATGGAAAGGTAACAACACTTCCTCTCCTTCCCATT TGTGTACCAGTCATATCTATATGCTTATTTACTTCTTTCATCTTTTGGATGAGACTACAAACTT GATTTCTCTTCTTCTATGGTTGATGCTTCATCTTCTAGTTTAAATGACAGTACAGACAATTTTA CTACCTGAACTTCTCTCGAAAATATTTTATTCAGTCCCTTGCTTCTGATGGAGCTTCCTGCATT ATCTAGGATTATCTTAATTTCTCAAGTGCTCACTAGAATATTTGGTGCTTCTTGGCTTTCTACA TGGCAATAAATATTACATGATCGTATAATGGATTTTCTCAATCAACATGCATGCACTCATAGCA CTACTTGCAGAGACAACATAATTCAAGTAGTAATAGAGTAAGATAAACATGTTGAAGAAGATCC ATGCCTTGCTCACAGAGGCCAGCTCCTGTCATGAACCTACAACTCCTTGGAACCTTACATATAC CTGCTTGTCTAAGTGAACTAAACAACTAATACGAATAAATACTAACAAAACTCAATCTTGTCTA AGTGAACTAAACAACTAATACGAATAAATACTAACAAAACTCAATCTATCTATCTAAACCTTAC TAATCGTGCACTTTTTAGGAGCTCTCAAGTCAACCAAAAAGATCTAGCCGTTGATATAATAAAT CATAACATCACAACCATAGATCGTAATATTTTTAACAGCCACATAAATCGGATCGTAGAATCCT ATATGGTTTATTAGTAGGAAATATCTCCCATAGATGTATGGTCTTGATGTCCGATCCGACAAAT TAGGTCCATAGCAAACCAATAAACCGATGGAAGTTACTCCTATCTCCTAATGAATAATCATGCA TGAATACGTATTGTTGTACAACCCCTGATGCTTGAATACGTATTGATGTCCAGCAAAATAGTAG ATCCATAGTCATAACAATTAATTTCGGTAATCTCTATCTTTGTGTAGAGAACAAACTATTTCCT AATTAATCTTCCTCCAAACTAAATAAACATACCATCAAAAATAATATGCACTTCATTTTATTAA AATTTAGTAACTCCAAAATTCTAGATTAAAAAAATATGATGTTTTTTTTATTTTAATTACGAAA TTTTGATTTTTTTTTTTTAAATAATATTGAAACTGTACAAGTAAGCTAAAGTTGACGTGCACTT TTAATCTAAATTACTACAATTTAGAAAATAGCCTGTGTATGTTAAATTCTATATATGTACAATA TGAATAATAATAATAATAACCCACACAACGCGCAAGTTGATGACTATTATAACTTAAAATTTCT ACAGTTGCTAGCTCATGGTTATATATGACATGCAAAAAGAATGAATCTTACCTGTCGTCTAAGT GAAATAAATAGCCAATACGAATAAATACCAAATAGAGCTCAAAATTGCTTGCAATTTTTATAGT AGCTAGCTCATGGTTTTATGTGAATGAATTGCAGAAAGAACAACTCAAACCCAAGGTCCTGAGC AAACATTATGGCTATTCAAAGATTTATTTGGCTAAAAGTGCAAAAATGATTGCATATTAGTTTC GGAATCCTTATTTCATCCGAATTTCAAAATCTCTGTGCAAAGGCTTTATATGATGAGGAGTATA AAATGCAATGGGCAAACCTGTTTTGAACCACCTGAAATGGAGCTAGCATAAATTAGTTTTGGAG CTTGAAATTAATTGAATTTCCAATGTGAAAATTATTGATTTTCTGATTTTTGCAAGGGTTGAAT ATTCCATTGAGTTCATTGCATTAGCATTTCGTGATGGATGTTGCAGTAGAGTGTGATCTTTATG GTCTACATGTTTGTTGCACCAACCTTAAAAAGCAGAGTATCTCTTCACATCTTTAATTAATGAC TTTTGTCTAAATCTTTTAATAGCCCACAAAAACAGTTCTCTCATAACCTCATCTTTTGTTGACA GTACATCATACTAGGTACTTATGAAGGTTGCGATCCTGTCAATAAGCTATACTACTGTGAAATT TGTACTCTTCCTCAAGGGATAGAGGGGTTCAAAGAGACAAAGGGGATGCTTCCATTTGTCAAGC TTATAGATAACTTTGATGCCCAATATCATGTTGTGGCAAATGATGGTGATGAATTTACATTTTT GACCAATAGAAATGCTCCTAAGAACAAGCTTGTAAGAGTAGATATCAAGAAGCCAGAATTGTGG ACTGATATTCTTCCTGAACATGAAAGAGATGTGCTCGAATCAGCTGACGCGGTTAATGGTAACC AGTTATTGGTATGTTATATGTCAGATGTTAAGCATATTCTGCAGATAAGAGACCTTGTAACTGG GAACTTGCTTCATAAGTTGCCTCTAGAAATTGGTTCTGTTTCAGAGATCTCCTGTAGACGGGAA GACATGGACGTCTTTATTGGCTTCACAAGCTTTCTTTCCCCTGGTATTATTTACAGGTGTAACC TCACATCTGCGATCCCAGAAATGAAGATATTTCGTGAAATTTCAGTTCCTGGATTTGATCGAAC AAATTTTGAGGTTAAGCAGGTACATGCCATCACTGTCTTAGGTTGCCATATCATTTTCTATACA AAGAATACCAATGAAACTAAATACTTCGTTAAAATGTGGTTTCTAACTGTTTTTGGTTTTTCAG ATTTTCGTCAATAGTAAGGATGGAACCAAAATTCCTATGTTCATAATGTCAAAGAGAGATATTG AACTTGATGGATCACATCCAACTTTGCTATATGGTTATGGTGGATTCAACATAAGTCTTACTCC TTCTTTCAGTGTTAGTCGTGTTGTTTTATGCAAGAACATGGGTTTTGTTGTCTGTGTTGCAAAT ATTCGGGGTGGTGGGGAATATGGGGAAGAGTGGCACAAAGCTGGAGCACGTGCAATGAAACAAA ATTGTTTTGACGACTTCATTGCTTGTGCTGAACTCCTCATTTCTGCTGGTTATACGAGTTACAG GCAGTTATGTATTGAAGGTGGAAGCAATGGTGGTCTTCTGATTGCTGCTTGCGTTAATCAGGTC ATACAGTAAACTCCTGTTTTCTACAATGCTTCTTCAGTCTGTATAAGTTATCTTGTACTCCCTC AGTAGAAAAAAATATGGGTGATTTTGAAAGTCTTAAAAGACAAGCTTTGATTGTTGATTTCTTA ATACATATAGAACAAAATTTTATGTAAGCTCTTTGAATATCTATTGATATAGTTCTTTTGCTCG AAATGCACTTGTTTGACTAGAGTTGTTCAAAATATGAATGTAGTAGTTATGATAGCATACTATT GTGATGTGGTTATAATATCATCCTATTGTGATATCATGCATAAATTTGATTTCCTGTCTTTCAG CGGCCTGATCTCTTTGGGTGTGCTCTTGCTCATGTTGGTGTTATGGACATGCTCCGTTTTCACA AGTTCACCATTGGTATTTCTTTTGTTCTGTTGTGTATCATCTTTGTTTTACCTGTATATTGATG CATATTATCAGTGAATGCTTCATGTTTTTTTGTAGGTCATGCCTGGACTACCGACTATGGTTGT TCAGACAATGAAGAGGAATTCCACTGGCTTATCAAGTATGGAATTTCTGTTATTTCCAACACCA CTTTTACTAGAATATGTGTTTCAGTTATTAGTTCATTACTCCAGTGATTGCTGGTCTAGTGGGC TATGTAGAATACTGCTACACCACTTTATTCTTGAGGTTTGAAAATTACAATTTCGTAGCTGACA GTTTCCGAGTTATATGTGCTGTTCAGGTCTTTTAATTGAGAGTCCAGTAGTGCTTAATTATCAT GTTAATTTCTTCATTTTTCCTGCTTAGTCTGAATATTCCTAGACTAAAATCTTGCATATACGTT AATCCACTGAGTCCATCATATTTAATTATTTGTGGTGATAATATTTTTCTATCCAATTTTCCGT CTCGGCAGAAAAAAGGCATCCAGTGTTCCAAAAGAGTCTTTTTAGTCATTCAGTAATAGAGTTC ATTGTGAACTCTGACCAAGTTGAACCTTCCATTTTCCAAAGTCACGCCATATCTTTTTTCAGTG TTTTATTAGATGTATTACACATCTATGCTGTACTGATGAGTGGTGAACATGTACTAGATATTCC CCCCTTCATAATGTGAGGAGACCTTGGGAGCAAAGTTTTGTTAACTGTTGTCAGTACCCAGCAA TCATGCTGTTGACTGCTGATCATGATGATCGTGTTGTGCCATTGCACTCATTGAAGTTGTTAGC A

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.126473448

Conservation Information
Conserved circRNAs	NA
PMCS	0.126473448

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							442762-447466(+)
442713-447426(-)
						
					

						Potential amino acid sequence
						
							MNIADKQTLSDKLSWVKFSSISWTHDGKGFFYGRYPAPREVELDAGTETNINLNHEIYYHVVGS
DQSEDILCWKDPEHPKYSFGASVTEDGKYIILGTYEGCDPVNKLYYCEICTLPQGIEGFKETKG
MLPFVKLIDNFDAQYHVVANDGDEFTFLTNRNAPKNKLVRVDIKKPELWTDILPEHERDVLESA
DAVNGNQLLVCYMSDVKHILQIRDLVTGNLLHKLPLEIGSVSEISCRREDMDVFIGFTSFLSPG
IIYRCNLTSAIPEMKIFREISVPGFDRTNFEVKQIFVNSKDGTKIPMFIMSKRDIELDGSHPTL
LYGYGGFNISLTPSFSVSRVVLCKNMGFVVCVANIRGGGEYGEEWHKAGARAMKQNCFDDFIAC
AELLISAGYTSYRQLCIEGGSNGGLLIAACVNQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTT
DYGCSDNEEEFHWLIKYSPLHNVRRPWEQSFVNCCQYPAIMLLTADHDDRVVPLHSLKLLADSL
DGEAEVLLDPNALSKDGTVALSTYSVSKDGKYIAYGLSESGSDWVTIRVMNIADKQTLSDKLSW
VKFSSISWTHDGKGFFYGRYPAPREVELDAGTETNINLNHEIYYHVVGSDQSEDILCWKDPEHP
KYSFGASVTEDGKYIILGTYEGCDPVNKLYYCEICTLPQGIEGFKETKGMLPFVKLIDNFDAQY
HVVANDGDEFTFLTNRNAPKNKLVRVDIKKPELWTDILPEHERDVLESADAVNGNQLLVCYMSD
VKHILQIRDLVTGNLLHKLPLEIGSVSEISCRREDMDVFIGFTSFLSPGIIYRCNLTSAIPEMK
IFREISVPGFDRTNFEVKQIFVNSKDGTKIPMFIMSKRDIELDGSHPTLLYGYGGFNISLTPSF
SVSRVVLCKNMGFVVCVANIRGGGEYGEEWHKAGARAMKQNCFDDFIACAELLISAGYTSYRQL
CIEGGSNGGLLIAACVNQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTTDYGCSDNEEEFHWLI
KYSPLHNVRRPWEQSFVNCCQYPAIMLLTADHDDRVVPLHSLKLLADSLDGEAEVLLDPNALSK
DGTVALSTYSVSKDGKYIAYGLSESGSDWVTIRVMNIADKQTLSDKLSWVKFSSISWTHDGKGF
FYGRYPAPREVELDAGTETNINLNHEIYYHVVGSDQSEDILCWKDPEHPKYSFGASVTEDGKYI
ILGTYEGCDPVNKLYYCEICTLPQGIEGFKETKGMLPFVKLIDNFDAQYHVVANDGDEFTFLTN
RNAPKNKLVRVDIKKPELWTDILPEHERDVLESADAVNGNQLLVCYMSDVKHILQIRDLVTGNL
LHKLPLEIGSVSEISCRREDMDVFIGFTSFLSPGIIYRCNLTSAIPEMKIFREISVPGFDRTNF
EVKQIFVNSKDGTKIPMFIMSKRDIELDGSHPTLLYGYGGFNISLTPSFSVSRVVLCKNMGFVV
CVANIRGGGEYGEEWHKAGARAMKQNCFDDFIACAELLISAGYTSYRQLCIEGGSNGGLLIAAC
VNQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTTDYGCSDNEEEFHWLIKYSPLHNVRRPWEQS
FVNCCQYPAIMLLTADHDDRVVPLHSLKLLADSLDGEAEVLLDPNALSKDGTVALSTYSVSKDG
KYIAYGLSESGSDWVTIRVMNIADKQTLSDKLSWVKFSSISWTHDGKGFFYGRYPAPREVELDA
GTETNINLNHEIYYHVVGSDQSEDILCWKDPEHPKYSFGASVTEDGKYIILGTYEGCDPVNKLY
YCEICTLPQGIEGFKETKGMLPFVKLIDNFDAQYHVVANDGDEFTFLTNRNAPKNKLVRVDIKK
PELWTDILPEHERDVLESADAVNGNQLLVCYMSDVKHILQIRDLVTGNLLHKLPLEIGSVSEIS
CRREDMDVFIGFTSFLSPGIIYRCNLTSAIPEMKIFREISVPGFDRTNFEVKQIFVNSKDGTKI
PMFIMSKRDIELDGSHPTLLYGYGGFNISLTPSFSVSRVVLCKNMGFVVCVANIRGGGEYGEEW
HKAGARAMKQNCFDDFIACAELLISAGYTSYRQLCIEGGSNGGLLIAACVNQRPDLFGCALAHV
GVMDMLRFHKFTIGHAWTTDYGCSDNEEEFHWLIKYSPLHNVRRPWEQSFVNCCQYPAIMLLTA
DHDDRVVPLHSLKLLA(+)
MYLPSLLTEYVERATVPSLLSAFGSRRTSASPSKLSANNFNECNGTTRSS*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	442762-447466(+) 442713-447426(-)
Potential amino acid sequence	MNIADKQTLSDKLSWVKFSSISWTHDGKGFFYGRYPAPREVELDAGTETNINLNHEIYYHVVGS DQSEDILCWKDPEHPKYSFGASVTEDGKYIILGTYEGCDPVNKLYYCEICTLPQGIEGFKETKG MLPFVKLIDNFDAQYHVVANDGDEFTFLTNRNAPKNKLVRVDIKKPELWTDILPEHERDVLESA DAVNGNQLLVCYMSDVKHILQIRDLVTGNLLHKLPLEIGSVSEISCRREDMDVFIGFTSFLSPG IIYRCNLTSAIPEMKIFREISVPGFDRTNFEVKQIFVNSKDGTKIPMFIMSKRDIELDGSHPTL LYGYGGFNISLTPSFSVSRVVLCKNMGFVVCVANIRGGGEYGEEWHKAGARAMKQNCFDDFIAC AELLISAGYTSYRQLCIEGGSNGGLLIAACVNQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTT DYGCSDNEEEFHWLIKYSPLHNVRRPWEQSFVNCCQYPAIMLLTADHDDRVVPLHSLKLLADSL DGEAEVLLDPNALSKDGTVALSTYSVSKDGKYIAYGLSESGSDWVTIRVMNIADKQTLSDKLSW VKFSSISWTHDGKGFFYGRYPAPREVELDAGTETNINLNHEIYYHVVGSDQSEDILCWKDPEHP KYSFGASVTEDGKYIILGTYEGCDPVNKLYYCEICTLPQGIEGFKETKGMLPFVKLIDNFDAQY HVVANDGDEFTFLTNRNAPKNKLVRVDIKKPELWTDILPEHERDVLESADAVNGNQLLVCYMSD VKHILQIRDLVTGNLLHKLPLEIGSVSEISCRREDMDVFIGFTSFLSPGIIYRCNLTSAIPEMK IFREISVPGFDRTNFEVKQIFVNSKDGTKIPMFIMSKRDIELDGSHPTLLYGYGGFNISLTPSF SVSRVVLCKNMGFVVCVANIRGGGEYGEEWHKAGARAMKQNCFDDFIACAELLISAGYTSYRQL CIEGGSNGGLLIAACVNQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTTDYGCSDNEEEFHWLI KYSPLHNVRRPWEQSFVNCCQYPAIMLLTADHDDRVVPLHSLKLLADSLDGEAEVLLDPNALSK DGTVALSTYSVSKDGKYIAYGLSESGSDWVTIRVMNIADKQTLSDKLSWVKFSSISWTHDGKGF FYGRYPAPREVELDAGTETNINLNHEIYYHVVGSDQSEDILCWKDPEHPKYSFGASVTEDGKYI ILGTYEGCDPVNKLYYCEICTLPQGIEGFKETKGMLPFVKLIDNFDAQYHVVANDGDEFTFLTN RNAPKNKLVRVDIKKPELWTDILPEHERDVLESADAVNGNQLLVCYMSDVKHILQIRDLVTGNL LHKLPLEIGSVSEISCRREDMDVFIGFTSFLSPGIIYRCNLTSAIPEMKIFREISVPGFDRTNF EVKQIFVNSKDGTKIPMFIMSKRDIELDGSHPTLLYGYGGFNISLTPSFSVSRVVLCKNMGFVV CVANIRGGGEYGEEWHKAGARAMKQNCFDDFIACAELLISAGYTSYRQLCIEGGSNGGLLIAAC VNQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTTDYGCSDNEEEFHWLIKYSPLHNVRRPWEQS FVNCCQYPAIMLLTADHDDRVVPLHSLKLLADSLDGEAEVLLDPNALSKDGTVALSTYSVSKDG KYIAYGLSESGSDWVTIRVMNIADKQTLSDKLSWVKFSSISWTHDGKGFFYGRYPAPREVELDA GTETNINLNHEIYYHVVGSDQSEDILCWKDPEHPKYSFGASVTEDGKYIILGTYEGCDPVNKLY YCEICTLPQGIEGFKETKGMLPFVKLIDNFDAQYHVVANDGDEFTFLTNRNAPKNKLVRVDIKK PELWTDILPEHERDVLESADAVNGNQLLVCYMSDVKHILQIRDLVTGNLLHKLPLEIGSVSEIS CRREDMDVFIGFTSFLSPGIIYRCNLTSAIPEMKIFREISVPGFDRTNFEVKQIFVNSKDGTKI PMFIMSKRDIELDGSHPTLLYGYGGFNISLTPSFSVSRVVLCKNMGFVVCVANIRGGGEYGEEW HKAGARAMKQNCFDDFIACAELLISAGYTSYRQLCIEGGSNGGLLIAACVNQRPDLFGCALAHV GVMDMLRFHKFTIGHAWTTDYGCSDNEEEFHWLIKYSPLHNVRRPWEQSFVNCCQYPAIMLLTA DHDDRVVPLHSLKLLA(+) MYLPSLLTEYVERATVPSLLSAFGSRRTSASPSKLSANNFNECNGTTRSS*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os01g0108200_circ_g.4

Address

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