Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G05710_circ_g.1 |
ID in PlantcircBase | ath_circ_000842 |
Alias | 1:1716196-1716624 |
Organism | Arabidpsis thaliana |
Position | chr1: 1716196-1716624 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT1G05710 |
Parent gene annotation |
protein_coding |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 1/1 |
Tissues | root;leaf |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G05710.8:3 AT1G05710.11:3 AT1G05710.2:3 AT1G05710.10:3 AT1G05710.3:3 AT1G05710.6:3 AT1G05710.12:3 AT1G05710.1:3 AT1G05710.9:3 AT1G05710.13:3 AT1G05710.4:3 AT1G05710.14:3 AT1G05710.5:3 AT1G05710.7:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.168030614 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Philips et al., 2020 |