Plant Circular RNA Database

Detail information of Os02g0801900_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os02g0801900_circ_g.2
					
						ID in PlantcircBase
						osa_circ_016993
					
						Alias
						Os02circ29230/Os_ciR51, 
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr2: 34183352-34183610  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRCexplorer, CIRI, PcircRNA_finder, SMALT, Segemehl, circRNA_finder, circseq_cup, find_circ, CIRI-long
					
						Parent gene
						
							Os02g0801900						
					
						Parent gene annotation
						
							Conserved hypothetical protein. (Os02t0801900-01);Conserved hypo
thetical protein. (Os02t0801900-02)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os02g0801900_circ_g.1 Os02g0801900_circ_g.3 						
					
						Support reads
						153/1503/147/237
					
						Tissues
						leaf and panicle/root/root/shoot, root, anther, seed, pistil, root, leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os02t0801900-02:2
Os02t0801900-01:2

General Information
CircRNA Name	Os02g0801900_circ_g.2
ID in PlantcircBase	osa_circ_016993
Alias	Os02circ29230/Os_ciR51,
Organism	Oryza sativa
Position	chr2: 34183352-34183610 JBrowse»
Reference genome	IRGSP-1.0.38
Type	ue-circRNA
Identification method	CIRCexplorer, CIRI, PcircRNA_finder, SMALT, Segemehl, circRNA_finder, circseq_cup, find_circ, CIRI-long
Parent gene	Os02g0801900
Parent gene annotation	Conserved hypothetical protein. (Os02t0801900-01);Conserved hypo thetical protein. (Os02t0801900-02)
Parent gene strand	+
Alternative splicing	Os02g0801900_circ_g.1 Os02g0801900_circ_g.3
Support reads	153/1503/147/237
Tissues	leaf and panicle/root/root/shoot, root, anther, seed, pistil, root, leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os02t0801900-02:2 Os02t0801900-01:2

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAGA
ATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGGggatcaagcatcatgcatggtaggccta
gggtgatttgttcgctatgcattcagtacatccttttcctcctcatatctaaattttagtttgt
tcagtcat

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 139
Transcript exons: 34183352-34183381,34183502-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTTGTGACCTATGTTCCTGGACTGCTCATGTGTC
TATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGT
CTATTCTTTGG
Transcript length: 139
Transcript exons: 34183352-34183392,34183513-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCTGTTCCTGGACTGCTCATGTGTC
TATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGT
CTATTCTTTGG
Transcript length: 145
Transcript exons: 34183352-34183395,34183510-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTCTATGTTCCTGGACTGCTCA
TGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTT
AATTGTCTATTCTTTGG
Transcript length: 148
Transcript exons: 34183352-34183391,34183503-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTTTGTGACCTATGTTCCTGGACTGC
TCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAG
CTTAATTGTCTATTCTTTGG
Transcript length: 161
Transcript exons: 34183352-34183392,34183491-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCTTCCCATTTCAGTTGTGACCTAT
GTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAGAATC
TTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 161
Transcript exons: 34183352-34183404,34183503-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCATTGTGACCTAT
GTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAGAATC
TTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 162
Transcript exons: 34183352-34183406,34183504-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTTGTGACCTA
TGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAGAAT
CTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 165
Transcript exons: 34183352-34183408,34183503-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACTTGTGAC
CTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAG
AATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 168
Transcript exons: 34183352-34183392,34183484-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCATTTTTTTTCCCATTTCAGTTGT
GACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAG
TAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 177
Transcript exons: 34183352-34183415,34183498-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT
TTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCT
GGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 192
Transcript exons: 34183352-34183395,34183463-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTCTGACAAAACGCTTGTGATT
GATTTTTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGA
TTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 192
Transcript exons: 34183352-34183416,34183484-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT
TATTTTTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGA
TTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 215
Transcript exons: 34183352-34183422,34183467-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT
TCCTCCTCAAAACGCTTGTGATTGATTTTTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGAC
TGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACT
AAGCTTAATTGTCTATTCTTTGG
Transcript length: 229
Transcript exons: 34183352-34183479,34183510-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT
TCCTCCTCATATCTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTG
CTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAG
AATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 230
Transcript exons: 34183352-34183404,34183434-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCATTTAGTTTGTT
CAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGATTGATTTTTTTTCCCATTTCAGTTGTGA
CCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTA
GAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 231
Transcript exons: 34183352-34183405,34183434-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTTTAGTTTGT
TCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGATTGATTTTTTTTCCCATTTCAGTTGTG
ACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGT
AGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 235
Transcript exons: 34183352-34183431,34183456-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT
TCCTCCTCATATCTAATCTGTTTCTGACAAAACGCTTGTGATTGATTTTTTTTCCCATTTCAGT
TGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCG
CAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 239
Transcript exons: 34183352-34183417,34183438-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT
TCGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGATTGATTTTTTTTCCCATTT
CAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGG
ATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 244
Transcript exons: 34183352-34183404,34183420-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCACCTCATATCTA
AATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGATTGATTTTTTTTCC
CATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCC
CCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 247
Transcript exons: 34183352-34183400,34183413-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTTTCCTCCTCATAT
CTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGATTGATTTTTTT
TCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCA
GCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 247
Transcript exons: 34183352-34183415,34183428-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT
CTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGATTGATTTTTTT
TCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCA
GCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 249
Transcript exons: 34183352-34183486,34183497-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT
TCCTCCTCATATCTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTG
ATTGATTTTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACT
CAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 251
Transcript exons: 34183352-34183404,34183413-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCATTTTCCTCCTC
ATATCTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGATTGATTT
TTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCA
CTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 254
Transcript exons: 34183352-34183417,34183423-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT
TCCATATCTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGATTGA
TTTTTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATT
GCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 254
Transcript exons: 34183352-34183444,34183450-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT
TCCTCCTCATATCTAAATTTTAGTTTGTTATGAAATCTGTTTCTGACAAAACGCTTGTGATTGA
TTTTTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATT
GCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 255
Transcript exons: 34183352-34183411,34183416-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCTCCT
CCTCATATCTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGATTG
ATTTTTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGAT
TGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 256
Transcript exons: 34183352-34183409,34183413-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATTTTCC
TCCTCATATCTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGATT
GATTTTTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGA
TTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG
Transcript length: 257
Transcript exons: 34183352-34183502,34183505-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT
TCCTCCTCATATCTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTG
ATTGATTTTTTTTCCCATTTCAGGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAG
ATTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTG
G
Transcript length: 258
Transcript exons: 34183352-34183413,34183415-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT
CCTCCTCATATCTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGA
TTGATTTTTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAA
GATTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTT
GG
Transcript length: 259
Transcript exons: 34183352-34183610
GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT
TCCTCCTCATATCTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTG
ATTGATTTTTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGA
AGATTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTT
TGG
						
					

						Genomic sequence
						
							GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT
TCCTCCTCATATCTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTG
ATTGATTTTTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGA
AGATTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTT
TGG
						
					

			
		

Sequences
Splice junction sequence	TATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAGA ATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGGggatcaagcatcatgcatggtaggccta gggtgatttgttcgctatgcattcagtacatccttttcctcctcatatctaaattttagtttgt tcagtcat
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 139 Transcript exons: 34183352-34183381,34183502-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTTGTGACCTATGTTCCTGGACTGCTCATGTGTC TATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGT CTATTCTTTGG Transcript length: 139 Transcript exons: 34183352-34183392,34183513-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCTGTTCCTGGACTGCTCATGTGTC TATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGT CTATTCTTTGG Transcript length: 145 Transcript exons: 34183352-34183395,34183510-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTCTATGTTCCTGGACTGCTCA TGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTT AATTGTCTATTCTTTGG Transcript length: 148 Transcript exons: 34183352-34183391,34183503-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTTTGTGACCTATGTTCCTGGACTGC TCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAG CTTAATTGTCTATTCTTTGG Transcript length: 161 Transcript exons: 34183352-34183392,34183491-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCTTCCCATTTCAGTTGTGACCTAT GTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAGAATC TTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 161 Transcript exons: 34183352-34183404,34183503-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCATTGTGACCTAT GTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAGAATC TTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 162 Transcript exons: 34183352-34183406,34183504-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTTGTGACCTA TGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAGAAT CTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 165 Transcript exons: 34183352-34183408,34183503-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACTTGTGAC CTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAG AATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 168 Transcript exons: 34183352-34183392,34183484-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCATTTTTTTTCCCATTTCAGTTGT GACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAG TAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 177 Transcript exons: 34183352-34183415,34183498-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT TTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCT GGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 192 Transcript exons: 34183352-34183395,34183463-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTCTGACAAAACGCTTGTGATT GATTTTTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGA TTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 192 Transcript exons: 34183352-34183416,34183484-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT TATTTTTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGA TTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 215 Transcript exons: 34183352-34183422,34183467-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT TCCTCCTCAAAACGCTTGTGATTGATTTTTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGAC TGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACT AAGCTTAATTGTCTATTCTTTGG Transcript length: 229 Transcript exons: 34183352-34183479,34183510-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT TCCTCCTCATATCTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTG CTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTAG AATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 230 Transcript exons: 34183352-34183404,34183434-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCATTTAGTTTGTT CAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGATTGATTTTTTTTCCCATTTCAGTTGTGA CCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGTA GAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 231 Transcript exons: 34183352-34183405,34183434-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTTTAGTTTGT TCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGATTGATTTTTTTTCCCATTTCAGTTGTG ACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCGCAGT AGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 235 Transcript exons: 34183352-34183431,34183456-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT TCCTCCTCATATCTAATCTGTTTCTGACAAAACGCTTGTGATTGATTTTTTTTCCCATTTCAGT TGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGGATCG CAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 239 Transcript exons: 34183352-34183417,34183438-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT TCGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGATTGATTTTTTTTCCCATTT CAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCCCCTGG ATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 244 Transcript exons: 34183352-34183404,34183420-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCACCTCATATCTA AATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGATTGATTTTTTTTCC CATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCAGCC CCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 247 Transcript exons: 34183352-34183400,34183413-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTTTCCTCCTCATAT CTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGATTGATTTTTTT TCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCA GCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 247 Transcript exons: 34183352-34183415,34183428-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT CTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGATTGATTTTTTT TCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACTCA GCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 249 Transcript exons: 34183352-34183486,34183497-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT TCCTCCTCATATCTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTG ATTGATTTTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCACT CAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 251 Transcript exons: 34183352-34183404,34183413-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCATTTTCCTCCTC ATATCTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGATTGATTT TTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATTGCA CTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 254 Transcript exons: 34183352-34183417,34183423-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT TCCATATCTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGATTGA TTTTTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATT GCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 254 Transcript exons: 34183352-34183444,34183450-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT TCCTCCTCATATCTAAATTTTAGTTTGTTATGAAATCTGTTTCTGACAAAACGCTTGTGATTGA TTTTTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGATT GCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 255 Transcript exons: 34183352-34183411,34183416-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCTCCT CCTCATATCTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGATTG ATTTTTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGAT TGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 256 Transcript exons: 34183352-34183409,34183413-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATTTTCC TCCTCATATCTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGATT GATTTTTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAGA TTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTGG Transcript length: 257 Transcript exons: 34183352-34183502,34183505-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT TCCTCCTCATATCTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTG ATTGATTTTTTTTCCCATTTCAGGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAAG ATTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTTG G Transcript length: 258 Transcript exons: 34183352-34183413,34183415-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT CCTCCTCATATCTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTGA TTGATTTTTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGAA GATTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTTT GG Transcript length: 259 Transcript exons: 34183352-34183610 GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT TCCTCCTCATATCTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTG ATTGATTTTTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGA AGATTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTT TGG
Genomic sequence	GGATCAAGCATCATGCATGGTAGGCCTAGGGTGATTTGTTCGCTATGCATTCAGTACATCCTTT TCCTCCTCATATCTAAATTTTAGTTTGTTCAGTCATGAAATCTGTTTCTGACAAAACGCTTGTG ATTGATTTTTTTTCCCATTTCAGTTGTGACCTATGTTCCTGGACTGCTCATGTGTCTATATAGA AGATTGCACTCAGCCCCTGGATCGCAGTAGAATCTTCCTTGACTAAGCTTAATTGTCTATTCTT TGG

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_012427 						
					
						PMCS
						0.844461509

Conservation Information
Conserved circRNAs	osi_circ_012427
PMCS	0.844461509

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							34183403-34183594(-)
						
						Potential amino acid sequence
						
							MHSEQITLGLPCMMLDPQRIDN*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to Pi-starvation

Functional Information
Coding potential	Y
Potential coding position	34183403-34183594(-)
Potential amino acid sequence	MHSEQITLGLPCMMLDPQRIDN*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to Pi-starvation

			
						 Other Information
					
						References
						Lu et al., 2015;Ye et al., 2015;Ye et al., 2016;Chu et al., 2017; this study

circRNA

Detail information of Os02g0801900_circ_g.2

Address

Any questions?

Supported by