Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os03g0755100_circ_g.2 |
ID in PlantcircBase | osa_circ_021954 |
Alias | NA |
Organism | Oryza sativa |
Position | chr3: 31151329-31152377 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | CIRCexplorer |
Parent gene | Os03g0755100 |
Parent gene annotation |
Half-size ABC transporter, Internal detoxification of aluminum ( Os03t0755100-01) |
Parent gene strand | + |
Alternative splicing | Os03g0755100_circ_g.1 |
Support reads | 1 |
Tissues | shoot |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | Os03t0755100-01:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.192782555 |
Functional Information | |
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Coding potential | Y |
Potential coding position |
31151669-31151370(+) 31151356-31152316(-) |
Potential amino acid sequence |
MFATSWKLTLLALVIVPVISIAVRKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQE SHEVLRYGEKVDETLKLGLKQAFSLHSASGMAIQFC*(+) MPEALCKLKACLRPSFSVSSTFSPYRKTS*(-) |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |