Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G15030_circ_g.3 |
ID in PlantcircBase | ath_circ_002622 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 5178759-5179183 JBrowse» |
Reference genome | TAIR10.38 |
Type | ei-circRNA |
Identification method | circRNA_finder |
Parent gene | AT1G15030 |
Parent gene annotation |
Putative uncharacterized protein At1g15030 |
Parent gene strand | + |
Alternative splicing | AT1G15030_circ_g.1 AT1G15030_circ_g.2 AT1G15030_circ_g.4 |
Support reads | 2 |
Tissues | whole_plant |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | AT1G15030.2:1 AT1G15030.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.132352588 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | ath-miR400 |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |