Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G20960_circ_g.2 |
ID in PlantcircBase | ath_circ_003695 |
Alias | Ath_circ_FC0461 |
Organism | Arabidpsis thaliana |
Position | chr1: 7305303-7305608 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | AT1G20960 |
Parent gene annotation |
DExH-box ATP-dependent RNA helicase DExH12 |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | 3 |
Tissues | whole_plant |
Exon boundary | No-No |
Splicing signals | CT-TA |
Number of exons covered | AT1G20960.2:1 AT1G20960.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.329242947 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017a |