Plant Circular RNA Database

Detail information of Os07g0507300_circ_g.4

			
						 General Information
					
						CircRNA Name
						Os07g0507300_circ_g.4
					
						ID in PlantcircBase
						osa_circ_033980
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr7: 19261717-19265683  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os07g0507300						
					
						Parent gene annotation
						
							Similar to GCK-like kinase MIK. (Os07t0507300-01);Similar to GCK
-like kinase MIK. (Os07t0507300-02)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os07g0507300_circ_g.1 Os07g0507300_circ_g.2 Os07g0507300_circ_g.3 Os07g0507300_circ_g.5 Os07g0507300_circ_g.6 Os07g0507300_circ_g.7 Os07g0507300_circ_g.8 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os07t0507300-01:11
Os07t0507300-02:11

General Information
CircRNA Name	Os07g0507300_circ_g.4
ID in PlantcircBase	osa_circ_033980
Alias	NA
Organism	Oryza sativa
Position	chr7: 19261717-19265683 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os07g0507300
Parent gene annotation	Similar to GCK-like kinase MIK. (Os07t0507300-01);Similar to GCK -like kinase MIK. (Os07t0507300-02)
Parent gene strand	-
Alternative splicing	Os07g0507300_circ_g.1 Os07g0507300_circ_g.2 Os07g0507300_circ_g.3 Os07g0507300_circ_g.5 Os07g0507300_circ_g.6 Os07g0507300_circ_g.7 Os07g0507300_circ_g.8
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os07t0507300-01:11 Os07t0507300-02:11

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGGTAAATAAGGAGTCAGAGGGAACTTCAGTGAAGAGACTCACGCTTCTTCTAAATCGATAACT
TTTATTGCAACTTCCTTATGCAGTTCCTTGTCAAACcttgaaggagagactacatcccttgtag
ccctctcaaccttgatagtaccagtaccatcatcttcttcaacatgtgttcgaccattttgtgt
ggcatccg

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTTGAAGGAGAGACTACATCCCTTGTAGCCCTCTCAACCTTGATAGTACCAGTACCATCATCTT
CTTCAACATGTGTTCGACCATTTTGTGTGGCATCCGCACTGCTTTTTACTGGAAACTTCGGTCG
CTCTCTGCCAATAACAGCAATTGAGGAACAAGGGAATCAGATAGGTGTTGAGATGTCTCAATTA
TCAGCAAAAGACTGCTTTTAACTCTTCTCTCTGTTATGAACAGAAGTACTATACCACATACCTT
ATTCTATCCAGAAGCTTTGGAGATTTTCTAGCATTTCTTACAAAGCGGTGCTTAAGAAGATCCT
TGGCACTTAGCCTCTGTGAGAAAGTTATAAAGGGAAGGCGTTAAGGGCAAGGACTTAAAACACA
ATTTTTTGCAGGTTAGACATCAATAATTATCAAATGAGATTGATAAAAAAAGCATAAAGCATTA
AAATTTCCCCCAAACATTACAATATGCCAAATTTGTTGGAAAAACGGGCATATGATGTTTTGTC
CACAATAGCATGTTAAATATCCAGAAAGCTGTTGTACTGTCCCTGATACTCATTCTGTACAACA
TATCATAAGATTTTATTTCTGTTCCCCTTCTAGTCACAAATCATGATCTCAACTATGACAGGTG
GAAGTCCAAATTTAATTTAGTATCAAAAGGAAAACATCGATACTGTGTATGTTTCACTGTAATC
AAGTCCTACGACTAGTCCTAAAGTCAGTCAGGGAGCACGACTTGACTTATGGGCAGAAGATGCA
ATGGAGTGGAGCAAAGGCAGCAACGGTAAGGCAAATCAGGAAACAGTTGGCATCAACATTCTTG
TTTTCATGAATATCTTTGGGAAACAAGAGCAAATGACGTGATTAATGGAACAGGTAGAAGCATG
AAAGAAGAATATTACCTCTGCTGGATTCTTCTTTAAACATAGTGACACAAACTCCTTCATCGGT
TTAGAGAAATGCTCATCAAGCTGCATTTTTTAAAAATTAATATACTATATTCTAGTGGATCAAA
GCAAATGCTTTGCGTATATTGCAATTAAGCATTAAAGAACAGGGATTGAAGATTAACCAAGTGA
CCTGAGGAGGATTTTCACGAGGTATCATGAAAAGAACTCTCATGGGATGGATATCTGCCAAAGG
GGGTTCACCTTTTGCCATTTCAATAGCAGTTATACCTAACGACCAGATATCTGCCTGCATCAGG
ACACAGACTTGGGTAAAAAGTTCAGTAAGCAGCAAACTGTTTAAAGAAAAACGCACAGCTACCT
TTTCATTGTACCCGTCAGAGTTTTGAATAACCTCAGGTGCCATCCAAAAGGGAGTTCCAACAAA
TGTCTACACAATTCAAAATTAAAAGCCATTAGCAATATTACCTTCCAAAAGCAAAGGTTTGTCC
TTGAGCTAAAAACACTACCGAATGATACTAGCAGAACAGGGAGCTTCCATCTTAATTAATACTG
ATAAGTGCTTATGGCTGTATAATTCAAATTTTGAATTGCGCTAAAGCATAAATAATAATCTTGT
GATATGCTTGATTAGATTTATCACCCTCCAAAAGTTTTCCATTTGAGTACAAGTAACGTATGCA
TATAGCCAAAATATGATTGTAGATGAGTCACTAGGTTCCTGGTGCACATATACAGCAATATCGA
GTAACTTGACATTGAAGAATCATGGTTAAGATCGCACCTTTCTCCTTGACATTGTTTTAGTCAG
CTGCGCAGAAACACCAAAGTCTGCAACCTATGGAATAAAAATATAAACGTTTGCATAGATATTG
TAAGCTAAGAATTAATAACAGAACTCAGGACCATCCTGACAATGGAACATAAAATCATTGAGAA
ATCGTAGAAAGGTTATACCTTCACATCTCCACTTTCAGTCAGGAGGATATTTGCCGCTGCAAAA
TATCACAGAATGTGTATATTAGAATGTGTGGTATACTTCACAGGTTCACATTAGTAAAATAGGA
AAGAAAATAAATGAGTCAAAGATCATCAATATATCAGGACTAATCAGTAGTCACACAATAGTGG
GGTCATTCGTTTATGTTCAATCAAATGCTATGAAAATACTAGCATCAAATGTATTGGTATGTTA
CTTCTGTGTAGTGAAGAACAATTTAAATGTGCAACCCATACAACTGCCTGCTAACTCTCCATTA
TCTTTTCATACAGACTCTAATGGTAGACCTATTTGACCCTATTTGACAGTGATCTTCCACATCA
TTGTACCTGTGGAAGTGTGGAAAGGCATTGCAGACTTTCCAGAACTCAATCTTATGTTTAAGAT
TATGCAAGGTTTGCTGGGGTTTTGTTCTCCCTCCATATCCACCAGCAACACTAAACTTTTCAAT
TCATCTAGCGCCAATACTAATGCAATGGCAAATGAAGGTTTTCACCAGCCCTTACATCTTAATC
TGCCAGATTTTAATTAAACAACAGCAAATATCTAATTGTTCTGTGTATCTGAGGATTCCCAAGT
TAGTGAAAAAGAAACTTCACTTTAATAAAAAAACAGTGAGTGACGATTTATCTTGATAGAAAAT
AATAGGTGTAAGTATGCAACGTAACAATAGTGGATGGGGTGAGAAAGAGGTGTCGCCTCTTGAA
CCACATCCTACTAAACCATCCAACTTAAAGATGGGATAAATCAAGAATAATAGTATAATACTAG
TAACATGATATAATTGACCTTTATCAACATCTTTTGAGTTCTGACAATAAAGATAAATGTGCAA
TTGGTATTAACGCATTAGTTCTCAAAGAAAGGAGTGTTAGCCCTGTCCAGAAAGCCTCCTTTAT
AATGGTTTTGTGGATATTGTACTTGGTGGACAGGACAGTAGATATGAGGGTTATCTGGCCCGTA
GTTATTAGGAACACAGCACAACCAACCAGGGGTTGAGGTACTGCAGTCAGAATATACCAGTATG
ATAACAAATGCTGTACAAAGGGAGGTATAGACTGTAGAGTTCTTCAGGACATGTTACATGGCCC
CAATTTTTCCAGTTTGATGACCCAAATGCTTTATTAAATGCTCATATTCAATATAAATCCAGCA
ATAAAAAGGGAAAGGGAGAGAAATAATCAAGACCTTTAATGTCACGGTGAATCTTTCCTTCTGA
ATGAAGATATTCAACTGCATGTAACAAGTCCCTCAGAATGCATGCAATAGACAATTCATCTAGA
GGAGGGCCAGTTTGGAGCTACAGATGAAAACAGAAATCATACCAACTTCAAATTTTGAACCAAT
TGAATGATTCTTGAAACTGAAATGATTTATTAACTTGTATGTAGATAATATAAGATTTTGCCGT
GTCAAATAAAATATAAAAAATAAACACATACTAGGTCAGCGACAGAACCACCAGCCATATATTC
CATTACTATCCACAGTTTCGTTTGATGAAGATATGAGCCATAATAGTCAGTTATATATGGACAA
CGGCATTGTGACAAAACAGATATCTCCTGCAACATGAAATTAATCCTATTAGGAATTAGGAAAT
AAATTATCCACATTCAATTTGATCTCATCATATCCTGTAATTGATACAGCGTATAAGGCGAAAG
AACAACCTTTTGGATGTCTTCAATGTCATCCTCACTGCATAGAATTAAAGGACATATAAGTAAC
TAATATAAAATTCTGGTAGTGTAGAAAACTATATCAAAAGAACCAGGCAAATCTAAAAGAGCAA
ACAGAATACACCACTTTGTTACTGGTACAAGAAATATATTAGCACCAGTACACAATACACCTTT
TCTTCTTGCAATAAGCCAATAAAAAAAGGATATCATGATTGCAAATGGCAAGAAACATGTTGGC
TTATATGCCATAAAACCTGATATAATATGGTAAATAAGGAGTCAGAGGGAACTTCAGTGAAGAG
ACTCACGCTTCTTCTAAATCGATAACTTTTATTGCAACTTCCTTATGCAGTTCCTTGTCAAAC
						
					

			
		

Sequences
Splice junction sequence	TGGTAAATAAGGAGTCAGAGGGAACTTCAGTGAAGAGACTCACGCTTCTTCTAAATCGATAACT TTTATTGCAACTTCCTTATGCAGTTCCTTGTCAAACcttgaaggagagactacatcccttgtag ccctctcaaccttgatagtaccagtaccatcatcttcttcaacatgtgttcgaccattttgtgt ggcatccg
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTTGAAGGAGAGACTACATCCCTTGTAGCCCTCTCAACCTTGATAGTACCAGTACCATCATCTT CTTCAACATGTGTTCGACCATTTTGTGTGGCATCCGCACTGCTTTTTACTGGAAACTTCGGTCG CTCTCTGCCAATAACAGCAATTGAGGAACAAGGGAATCAGATAGGTGTTGAGATGTCTCAATTA TCAGCAAAAGACTGCTTTTAACTCTTCTCTCTGTTATGAACAGAAGTACTATACCACATACCTT ATTCTATCCAGAAGCTTTGGAGATTTTCTAGCATTTCTTACAAAGCGGTGCTTAAGAAGATCCT TGGCACTTAGCCTCTGTGAGAAAGTTATAAAGGGAAGGCGTTAAGGGCAAGGACTTAAAACACA ATTTTTTGCAGGTTAGACATCAATAATTATCAAATGAGATTGATAAAAAAAGCATAAAGCATTA AAATTTCCCCCAAACATTACAATATGCCAAATTTGTTGGAAAAACGGGCATATGATGTTTTGTC CACAATAGCATGTTAAATATCCAGAAAGCTGTTGTACTGTCCCTGATACTCATTCTGTACAACA TATCATAAGATTTTATTTCTGTTCCCCTTCTAGTCACAAATCATGATCTCAACTATGACAGGTG GAAGTCCAAATTTAATTTAGTATCAAAAGGAAAACATCGATACTGTGTATGTTTCACTGTAATC AAGTCCTACGACTAGTCCTAAAGTCAGTCAGGGAGCACGACTTGACTTATGGGCAGAAGATGCA ATGGAGTGGAGCAAAGGCAGCAACGGTAAGGCAAATCAGGAAACAGTTGGCATCAACATTCTTG TTTTCATGAATATCTTTGGGAAACAAGAGCAAATGACGTGATTAATGGAACAGGTAGAAGCATG AAAGAAGAATATTACCTCTGCTGGATTCTTCTTTAAACATAGTGACACAAACTCCTTCATCGGT TTAGAGAAATGCTCATCAAGCTGCATTTTTTAAAAATTAATATACTATATTCTAGTGGATCAAA GCAAATGCTTTGCGTATATTGCAATTAAGCATTAAAGAACAGGGATTGAAGATTAACCAAGTGA CCTGAGGAGGATTTTCACGAGGTATCATGAAAAGAACTCTCATGGGATGGATATCTGCCAAAGG GGGTTCACCTTTTGCCATTTCAATAGCAGTTATACCTAACGACCAGATATCTGCCTGCATCAGG ACACAGACTTGGGTAAAAAGTTCAGTAAGCAGCAAACTGTTTAAAGAAAAACGCACAGCTACCT TTTCATTGTACCCGTCAGAGTTTTGAATAACCTCAGGTGCCATCCAAAAGGGAGTTCCAACAAA TGTCTACACAATTCAAAATTAAAAGCCATTAGCAATATTACCTTCCAAAAGCAAAGGTTTGTCC TTGAGCTAAAAACACTACCGAATGATACTAGCAGAACAGGGAGCTTCCATCTTAATTAATACTG ATAAGTGCTTATGGCTGTATAATTCAAATTTTGAATTGCGCTAAAGCATAAATAATAATCTTGT GATATGCTTGATTAGATTTATCACCCTCCAAAAGTTTTCCATTTGAGTACAAGTAACGTATGCA TATAGCCAAAATATGATTGTAGATGAGTCACTAGGTTCCTGGTGCACATATACAGCAATATCGA GTAACTTGACATTGAAGAATCATGGTTAAGATCGCACCTTTCTCCTTGACATTGTTTTAGTCAG CTGCGCAGAAACACCAAAGTCTGCAACCTATGGAATAAAAATATAAACGTTTGCATAGATATTG TAAGCTAAGAATTAATAACAGAACTCAGGACCATCCTGACAATGGAACATAAAATCATTGAGAA ATCGTAGAAAGGTTATACCTTCACATCTCCACTTTCAGTCAGGAGGATATTTGCCGCTGCAAAA TATCACAGAATGTGTATATTAGAATGTGTGGTATACTTCACAGGTTCACATTAGTAAAATAGGA AAGAAAATAAATGAGTCAAAGATCATCAATATATCAGGACTAATCAGTAGTCACACAATAGTGG GGTCATTCGTTTATGTTCAATCAAATGCTATGAAAATACTAGCATCAAATGTATTGGTATGTTA CTTCTGTGTAGTGAAGAACAATTTAAATGTGCAACCCATACAACTGCCTGCTAACTCTCCATTA TCTTTTCATACAGACTCTAATGGTAGACCTATTTGACCCTATTTGACAGTGATCTTCCACATCA TTGTACCTGTGGAAGTGTGGAAAGGCATTGCAGACTTTCCAGAACTCAATCTTATGTTTAAGAT TATGCAAGGTTTGCTGGGGTTTTGTTCTCCCTCCATATCCACCAGCAACACTAAACTTTTCAAT TCATCTAGCGCCAATACTAATGCAATGGCAAATGAAGGTTTTCACCAGCCCTTACATCTTAATC TGCCAGATTTTAATTAAACAACAGCAAATATCTAATTGTTCTGTGTATCTGAGGATTCCCAAGT TAGTGAAAAAGAAACTTCACTTTAATAAAAAAACAGTGAGTGACGATTTATCTTGATAGAAAAT AATAGGTGTAAGTATGCAACGTAACAATAGTGGATGGGGTGAGAAAGAGGTGTCGCCTCTTGAA CCACATCCTACTAAACCATCCAACTTAAAGATGGGATAAATCAAGAATAATAGTATAATACTAG TAACATGATATAATTGACCTTTATCAACATCTTTTGAGTTCTGACAATAAAGATAAATGTGCAA TTGGTATTAACGCATTAGTTCTCAAAGAAAGGAGTGTTAGCCCTGTCCAGAAAGCCTCCTTTAT AATGGTTTTGTGGATATTGTACTTGGTGGACAGGACAGTAGATATGAGGGTTATCTGGCCCGTA GTTATTAGGAACACAGCACAACCAACCAGGGGTTGAGGTACTGCAGTCAGAATATACCAGTATG ATAACAAATGCTGTACAAAGGGAGGTATAGACTGTAGAGTTCTTCAGGACATGTTACATGGCCC CAATTTTTCCAGTTTGATGACCCAAATGCTTTATTAAATGCTCATATTCAATATAAATCCAGCA ATAAAAAGGGAAAGGGAGAGAAATAATCAAGACCTTTAATGTCACGGTGAATCTTTCCTTCTGA ATGAAGATATTCAACTGCATGTAACAAGTCCCTCAGAATGCATGCAATAGACAATTCATCTAGA GGAGGGCCAGTTTGGAGCTACAGATGAAAACAGAAATCATACCAACTTCAAATTTTGAACCAAT TGAATGATTCTTGAAACTGAAATGATTTATTAACTTGTATGTAGATAATATAAGATTTTGCCGT GTCAAATAAAATATAAAAAATAAACACATACTAGGTCAGCGACAGAACCACCAGCCATATATTC CATTACTATCCACAGTTTCGTTTGATGAAGATATGAGCCATAATAGTCAGTTATATATGGACAA CGGCATTGTGACAAAACAGATATCTCCTGCAACATGAAATTAATCCTATTAGGAATTAGGAAAT AAATTATCCACATTCAATTTGATCTCATCATATCCTGTAATTGATACAGCGTATAAGGCGAAAG AACAACCTTTTGGATGTCTTCAATGTCATCCTCACTGCATAGAATTAAAGGACATATAAGTAAC TAATATAAAATTCTGGTAGTGTAGAAAACTATATCAAAAGAACCAGGCAAATCTAAAAGAGCAA ACAGAATACACCACTTTGTTACTGGTACAAGAAATATATTAGCACCAGTACACAATACACCTTT TCTTCTTGCAATAAGCCAATAAAAAAAGGATATCATGATTGCAAATGGCAAGAAACATGTTGGC TTATATGCCATAAAACCTGATATAATATGGTAAATAAGGAGTCAGAGGGAACTTCAGTGAAGAG ACTCACGCTTCTTCTAAATCGATAACTTTTATTGCAACTTCCTTATGCAGTTCCTTGTCAAAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_017114 						
					
						PMCS
						0.12067772

Conservation Information
Conserved circRNAs	osi_circ_017114
PMCS	0.12067772

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							19265315-19262806(+)
19265113-19261719(-)
						
						Potential amino acid sequence
						
							MSSMSSSASSKSITFIATSLCSSLSNLEGETTSLVALSTLIVPVPSSSSTCVRPFCVASALLFT
GNFGRSLILSRSFGDFLAFLTKRCLRRSLALSLSAGFFFKHSDTNSFIGLEKCSSS*(+)
MEYMAGGSVADLLQTGPPLDELSIACILRDLLHAVEYLHSEGKIHRDIKAANILLTESGDVKVA
DFGVSAQLTKTMSRRKTFVGTPFWMAPEVIQNSDGYNEKADIWSLGITAIEMAKGEPPLADIHP
MRVLFMIPRENPPQLDEHFSKPMKEFVSLCLKKNPAERLSAKDLLKHRFVRNARKSPKLLDRIR
ERPKFPVKSSADATQNGRTHVEEDDGTGTIKVERATRDVVSPSRFDKELHKEVAIKVIDLEEAE
DDIEDIQKEISVLSQCRCPYITDYYGSYLHQTKLWIVMEYMAGGSVADLLQTGPPLDELSIACI
LRDLLHAVEYLHSEGKIHRDIKAANILLTESGDVKVADFGVSAQLTKTMSRRKTFVGTPFWMAP
EVIQNSDGYNEKADIWSLGITAIEMAKGEPPLADIHPMRVLFMIPRENPPQLDEHFSKPMKEFV
SLCLKKNPAERLSAKDLLKHRFVRNARKSPKLLDRIRERPKFPVKSSADATQNGRTHVEEDDGT
GTIKVERATRDVVSPSRFDKELHKEVAIKVIDLEEAEDDIEDIQKEISVLSQCRCPYITDYYGS
YLHQTKLWIVMEYMAGGSVADLLQTGPPLDELSIACILRDLLHAVEYLHSEGKIHRDIKAANIL
LTESGDVKVADFGVSAQLTKTMSRRKTFVGTPFWMAPEVIQNSDGYNEKADIWSLGITAIEMAK
GEPPLADIHPMRVLFMIPRENPPQLDEHFSKPMKEFVSLCLKKNPAERLSAKDLLKHRFVRNAR
KSPKLLDRIRERPKFPVKSSADATQNGRTHVEEDDGTGTIKVERATRDVVSPSRFDKELHKEVA
IKVIDLEEAEDDIEDIQKEISVLSQCRCPYITDYYGSYLHQTKLWIVMEYMAGGSVADLLQTGP
PLDELSIACILRDLLHAVEYLHSEGKIHRDIKAANILLTESGDVKVADFGVSAQLTKTMSRRKT
FVGTPFWMAPEVIQNSDGYNEKADIWSLGITAIEMAKGEPPLADIHPMRVLFMIPRENPPQLDE
HFSKPMKEFVSLCLKKNPAERLSAKDLLKHRFVRNARKSPKLLDRIRERPKFPVKSSADATQNG
RTHVEEDDGTGTIKVERATRDVVSPS(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	19265315-19262806(+) 19265113-19261719(-)
Potential amino acid sequence	MSSMSSSASSKSITFIATSLCSSLSNLEGETTSLVALSTLIVPVPSSSSTCVRPFCVASALLFT GNFGRSLILSRSFGDFLAFLTKRCLRRSLALSLSAGFFFKHSDTNSFIGLEKCSSS*(+) MEYMAGGSVADLLQTGPPLDELSIACILRDLLHAVEYLHSEGKIHRDIKAANILLTESGDVKVA DFGVSAQLTKTMSRRKTFVGTPFWMAPEVIQNSDGYNEKADIWSLGITAIEMAKGEPPLADIHP MRVLFMIPRENPPQLDEHFSKPMKEFVSLCLKKNPAERLSAKDLLKHRFVRNARKSPKLLDRIR ERPKFPVKSSADATQNGRTHVEEDDGTGTIKVERATRDVVSPSRFDKELHKEVAIKVIDLEEAE DDIEDIQKEISVLSQCRCPYITDYYGSYLHQTKLWIVMEYMAGGSVADLLQTGPPLDELSIACI LRDLLHAVEYLHSEGKIHRDIKAANILLTESGDVKVADFGVSAQLTKTMSRRKTFVGTPFWMAP EVIQNSDGYNEKADIWSLGITAIEMAKGEPPLADIHPMRVLFMIPRENPPQLDEHFSKPMKEFV SLCLKKNPAERLSAKDLLKHRFVRNARKSPKLLDRIRERPKFPVKSSADATQNGRTHVEEDDGT GTIKVERATRDVVSPSRFDKELHKEVAIKVIDLEEAEDDIEDIQKEISVLSQCRCPYITDYYGS YLHQTKLWIVMEYMAGGSVADLLQTGPPLDELSIACILRDLLHAVEYLHSEGKIHRDIKAANIL LTESGDVKVADFGVSAQLTKTMSRRKTFVGTPFWMAPEVIQNSDGYNEKADIWSLGITAIEMAK GEPPLADIHPMRVLFMIPRENPPQLDEHFSKPMKEFVSLCLKKNPAERLSAKDLLKHRFVRNAR KSPKLLDRIRERPKFPVKSSADATQNGRTHVEEDDGTGTIKVERATRDVVSPSRFDKELHKEVA IKVIDLEEAEDDIEDIQKEISVLSQCRCPYITDYYGSYLHQTKLWIVMEYMAGGSVADLLQTGP PLDELSIACILRDLLHAVEYLHSEGKIHRDIKAANILLTESGDVKVADFGVSAQLTKTMSRRKT FVGTPFWMAPEVIQNSDGYNEKADIWSLGITAIEMAKGEPPLADIHPMRVLFMIPRENPPQLDE HFSKPMKEFVSLCLKKNPAERLSAKDLLKHRFVRNARKSPKLLDRIRERPKFPVKSSADATQNG RTHVEEDDGTGTIKVERATRDVVSPS(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os07g0507300_circ_g.4

Address

Any questions?

Supported by