Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d011086_circ_g.1 |
ID in PlantcircBase | zma_circ_005707 |
Alias | seedling_test_circ_000169 |
Organism | Zea mays |
Position | chr8: 138467752-138470120 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d011086 |
Parent gene annotation |
Actin-7 |
Parent gene strand | + |
Alternative splicing | Zm00001d011086_circ_ag.1 Zm00001d011086_circ_ag.2 Zm00001d011086_circ_ag.3 Zm00001d011086_circ_ag.4 |
Support reads | NA |
Tissues | seedling |
Exon boundary | No-No |
Splicing signals | CT-GA |
Number of exons covered | Zm00001d011086_T008:3 Zm00001d011086_T003:5 Zm00001d011086_T007:3 Zm00001d011086_T001:5 Zm00001d011086_T002:3 Zm00001d011086_T006:3 Zm00001d011086_T005:4 Zm00001d011086_T004:5 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.102802712 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |