CircRNA Name |
AT1G06150_circ_g.6 |
ID in PlantcircBase |
ath_circ_000944 |
Alias |
AT1G06149_C1, AT1G06150_C1 |
Organism |
Arabidpsis thaliana |
Position |
chr1: 1872226-1872888 JBrowse» |
Reference genome |
TAIR10.38 |
Type |
e-circRNA
|
Identification method |
CIRCexplorer, MapSplice, PcircRNA_finder, CIRI-full, CIRI2 |
Parent gene |
AT1G06150 |
Parent gene annotation |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
Parent gene strand |
- |
Alternative splicing |
AT1G06150_circ_g.5 |
Support reads |
1/6 |
Tissues |
aerial, whole_plant/seedlings/leaf |
Exon boundary |
Yes-Yes
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
Splicing signals |
CT-AC
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
Number of exons covered |
AT1G06150.1:3 AT1G06150.2:3
|