Plant Circular RNA Database

Detail information of GLYMA_U017400_circ_g.2

			
						 General Information
					
						CircRNA Name
						GLYMA_U017400_circ_g.2
					
						ID in PlantcircBase
						gma_circ_007841
					
						Alias
						gma-circRNA2849
					
						Organism
						
							Glycine max						
					
						Position
						
							chrscaffold_21: 2895600-2899882  JBrowse»						
					
						Reference genome
						
							v2.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							GLYMA_U017400						
					
						Parent gene annotation
						
							hypothetical protein
							
						Parent gene strand
						-
					
						Alternative splicing
						
							GLYMA_U017400_circ_g.1 GLYMA_U017400_circ_g.3 						
					
						Support reads
						NA
					
						Tissues
						flower bud
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						KRG88980:6
KRG88979:6

General Information
CircRNA Name	GLYMA_U017400_circ_g.2
ID in PlantcircBase	gma_circ_007841
Alias	gma-circRNA2849
Organism	Glycine max
Position	chrscaffold_21: 2895600-2899882 JBrowse»
Reference genome	v2.0.38
Type	e-circRNA
Identification method	find_circ
Parent gene	GLYMA_U017400
Parent gene annotation	hypothetical protein
Parent gene strand	-
Alternative splicing	GLYMA_U017400_circ_g.1 GLYMA_U017400_circ_g.3
Support reads	NA
Tissues	flower bud
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	KRG88980:6 KRG88979:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ATTGACTGCAGTTTGAAGGGGCTCATTAATAGTAATCCAGTTCTTCACTCTATCCCCAAAACTT
GCAAAGCAAGTATCTGCATAAACAGCAAAGTACTCTtttatagcctgagcaactgacgcaagat
atcctttgaaatagcgaactctcagtttgtcatctagcatctcatgtaacggcaagttatcatt
atcttcat

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 802
Transcript exons: ,2895600-2895708,2896500-2896599,2896691-2896725,2896812
-2897026,2899091-2899206,2899657-2899882
TTTATAGCCTGAGCAACTGACGCAAGATATCCTTTGAAATAGCGAACTCTCAGTTTGTCATCTA
GCATCTCATGTAACGGCAAGTTATCATTATCTTCATCATCCATACCATTCTCTGTGACAAATAT
CGGAGTAGCATATTTTTGTGATACATAATTGAGAATCTTCCGTAGACCCCAGGGAACAACATAG
AGCCACTCTGATGCTGCCTTCTCACCTATGGCCTGGCCACCTTCCCATTCCACAATTCTCTCCA
TCTCTTGCACCTTGTAGTAATGGTTTTCTTCGGCGCATTCTGTCACATGAGAAATAAACCTTGA
CGTATAGTGATTTAGACCAATAAAGTCCAAAGCATTCAAAAGAATTTTCTTATCCTCCTCTGAA
AACTTGGGAAGCTGATCTCCAAGTCTTTCACGCATAACTTCAGGATAGTCTCCATAATATAGTG
GATGCAAGAACCAGCCAAGCTGAAAATCCAGGCGTCTTGCAGCAGCAGATTTATCTTCAATCTT
ATCGGAATTAGCCTCTGCCCATTCACAATCTACCACAAAGCCCACTTGTCCCCCTTGCTTATCC
TTGTATTTGCTCCGGTATATGGAAACAGCTGCTGCATGGGCCAAAATCTGATGATGTGCTGCCA
AATATGGCTCTATAAGAGAATTTTCTCGTCTTCCTGGAGCAAAAATTGCAACATCATACCCATT
GACTGCAGTTTGAAGGGGCTCATTAATAGTAATCCAGTTCTTCACTCTATCCCCAAAACTTGCA
AAGCAAGTATCTGCATAAACAGCAAAGTACTCT
						
					

						Genomic sequence
						
							TTTATAGCCTGAGCAACTGACGCAAGATATCCTTTGAAATAGCGAACTCTCAGTTTGTCATCTA
GCATCTCATGTAACGGCAAGTTATCATTATCTTCATCATCCATACCTGCCAAATGGAAATCCGG
CCTCAGATCATAGAAGAGAACAATTTCATAATGGATTTGCACATACGTATACTGGATAGAACTA
TCATTGTGGTTTCTCTGTGAACCTCTCTCCACTTGTGTTTTTTCTACTTAAGTTTGTTACTTTT
CCATATAATTTGGAGAGCTTTTTTTTTTTCTGTACTTTCCTTTAATTCCATATTAGAGCAAAGG
TATTGGATTTTGATGTGGGGTTTATAATATAGACTTGCGCTCTCGTATCATTATAGATAGGCAT
TGTGGTGGGAGACTCTCAAGGTTCTTATCAATTGGTATCAAAGTGTTCCACCTTGTCTAATGCA
GGGGGCAACGTCAACATTGCAATGTTTACCTAATACTAGTTAAGTAGTTATGGTAGAGCCACAT
AGGTGCCAGGGCAGCAGAGCATGGTGGAATATTTGAATCCAAAAGCAAAATATGGAACTTGAAC
CCCAAATTGGAAGAATGGGATTTTGTAGAATTCAAGGTTCCGATCAAAATTGCAAACCATAAAC
TTGACCACATTACATTCCAACCCTTTTCTTTTTCTTTTGACTAACTATTAACTTATCATCGTTT
AGTGCATCGAACAATTCTTAATTGCCACTATATAGTCAGATTCAATACATGGATTTAACCAAAC
AAATAACAATACTAGTAATGCCTTTCACTTGACATCTGATTTCTTCATCACTTTTTCTCTTTAT
CTGTTTATACTCTACCTGTTTTCTTGCCTAATTTATAGGAACTAGGAAGGATGAGTATAGTTAC
GTACCATTCTCTGTGACAAATATCGGAGTAGCATATTTTTGTGATACATAATTGAGAATCTTCC
GTAGACCCCAGGGAACAACATAGAGCCACTCTGATGCTGCCTGTTATATCCACACAGAATATAA
AACTAGAATGTTTGGCCTTGTATATGCAAATGTATACAACAAGCACGTTGAGAGAGAGAGTACA
CACCTTCTCACCTATGGCCTGGCCACCTTCCCATTCCACTGTTGACAGAACACAATTATCAAGG
AGAATTCGTTGTGTAAGATATTTTAGAAAATGAGAAAATGTTCCAATTATTATTTATTACCAAT
TCTCTCCATCTCTTGCACCTTGTAGTAATGGTTTTCTTCGGCGCATTCTGTCACATGAGAAATA
AACCTTGACGTATAGTGATTTAGACCAATAAAGTCCAAAGCATTCAAAAGAATTTTCTTATCCT
CCTCTGAAAACTTGGGAAGCTGATCTCCAAGTCTTTCACGCATAACTTCAGGATAGTCTCCATA
ATATAGTGGATGCAAGAACCTGAATTAAAAATATATTTTAACATAATGTCTTCAACCTGCTATC
CTATACAAGCCTCATATTCTATTTTGCGTAATTTTCTTCACCGTCAATTTATCTTCAATTTCCA
GTGTGCATCAGGGTCAAAGAAAAAATGAATATTGGTTTGTCTTCATTAACTTTGTGGTGTTAAG
TAGAAAAATAGAAAGAAAAGGTTTCAAATCAAGACCATCAGTTGAATTGAGTTCAACAGTTTAT
AACATCATGATAAGGAATTCTAATGGAGGTGCTCCATTGAAATAAATTTTAAGTAAAGTGATTT
GGTAGTTCGAGACTATAACAGCCAAAGCTTTCGGGAGACAATGATTGTACTTCACTATGAATGA
TTGATTACAATGCAGAGGTATAAATAAAAAAATTGGTCAACATCTGTACACAGGCCAAAATCAG
AGGAGATAATATCCTCTTAAATGGCAGCAAACTATAAAAGGAAAGAATATACAGGTTATCCTAA
AAAATTAACAAAGGGATATTATCCTAGTTGTACAAATCATAATTGGATGATTCTGATCGGTGCT
AGATATCAGGAAACAATCTTCTAAATTAAGAACAGATCACCAACACGCCCCTCAAGCTACGTTA
TAGATGTCTATCATACCCAAATTGGATTTGAATCTAATGATTTCATAAGTGCAGCTTGGAAGAG
CTTTGGTTAAAATATCTGCAGTATGGATGCATGAGGGCACAAGACAGATGATTCCATGGTCAAT
CTTTTTTTTATGAAATGATAGTCAATTTCCACATGCTTTGTTATGTCAGGATTCAGAAGGGCTC
TTTTCTTTCCCCTTCATTAGAGTGAGCTTTCCACCCAAAGCATCATCCTTTCTTTACATCTTTA
GATGAAATGAAAGACCACTTCCCTCTCTTTCTTTTGAATACGCCTTGTGTCATGATTAAGATAC
TTTCATTGCACCATCTAACAATCTTGAAATCCACCCTGGATGCCTTTTTCTTTGAAGAAAGCCT
CTCTCTCTCTCTCTCTCTTCATTCAATAGCTATGGTTGTCCATTTCAATAAGGATAGTCCTCGC
CTCATGAGCTAGCTTTTGAGACTAAATTAGGCCCAACCAAAATTCAAGAAACTCTCCCAGAGTG
ATCTATTCTTTGTCATCAATTATTGAATTACAAGAATAAAGCCTTGACCCTCTTCTTGAAAAAC
CTTCCTCGTGCTTTGAAAAGGAGCAATTCTCGTCTGTTCAATTTCTATGAACAATTTCTTTTGG
CCTCCCAAGCTAATCCTTTTTGTCAAATCTTCAAGGTTAGATTTAATGTCCCCAAAAGAAGCCA
GTCAGTCAAGCCCTAACACCACATCAGCTCCTTCCCCAATCTCATTTCCTTTCCTTTCCTCTTC
AACCTCTCCTAGTATTTGGATTTGGACTTAGGGCCTAAGTCAACCGCACAAATTAGCTTGTAAG
GGAATGATTGTCTAAGCTTTATAAGGACTAGTTTAGTCATATCTCTAATCGATGTGAGATCTCA
ACCCCTAAGAGTCAGCATCCTAATGGTTGTACTCTACGATACTTCACTCATTTCTGGTCAGACC
CTCCATAGGTTGCCCTTTCTAAGACACTGGAAACCAACTCTTATAGGCCGCAATTAAGACAACT
TTCTAGCATACCATCTTAGAATTTGGGCTTTAGGACCTAACTCAATCACACAAAATCGCTTTGT
AAGATAAGGATTGTCTAAGCTTTATAAGGACTACATTGGTCATATCTCTAGTCAATGTGAGATC
TCCACTTCAACATCCTGACAGTTGTTCATGAACTGAACTATACCAGTGTAACTTTTTTTTTAGT
CAGCCAAAAGAAAATATTATTAATAAAGAAAAGGGTACCAGAGGTACCTAAACATTACAATAGA
GTCTACTAGTTTAACTTATACCCACAGTTATACACTCAATTTTTTAAAGAATGTGATTTTTTTT
TTTGTTACAATAGAATGTGATCTATGTCAATGCAACCGTTGAATGTGTCAATCTCTTATTATTA
TAATAATAATATGGAACAAATGAATGAGGAACTACCAGCCAAGCTGAAAATCCAGGCGTCTTGC
AGCAGCAGATTTATCTTCAATCTTATCGGAATTAGCCTCTGCCCATTCACAATCTACCACAAAG
CCCACTTGTCCCCCTTGCTTATCCTGGAATGTCAAGACATATTTAGAAAGAATAAATTATACCT
TCACAACATTTTTCTAACATGGTTAGCATTAAATTATATATTTAAACAAAATTCACAGATAATT
TGATAATTAATAACAACAGCAATACCCTACTGGCTACAACCAAGTGGGATTTGGATATACGGAT
CGATCAACTCCATTGGCTCCATCAAAATCTACCTTTTCACTCAAACATTTTTTTTTTATAGTTT
CTACTAATGTTTTCTTAGATCTGAGCTTACGCAGATAATTGAAATACAGAAAATCATGCTGGTA
ATTTATAGATCGAAAAAAATAACAAAAATAGGCAATTAATGGAAAATCAAGAAAATACACAATA
GGGAGGAGTGGCAGAAGCAACAAAGTAAAAGTAATCCAACTTGCAAAATAGAAAGTTTTGTGTA
GAAATGAATAAGTGCAGTCCTGCACCTTGTATTTGCTCCGGTATATGGAAACAGCTGCTGCATG
GGCCAAAATCTGATGATGTGCTGCCAAATATGGCTCTATAAGAGAATTTTCTCGTCTTCCTGGA
GCAAAAATTGCAACATCATACCCATTGACTGCAGTTTGAAGGGGCTCATTAATAGTAATCCAGT
TCTTCACTCTATCCCCAAAACTTGCAAAGCAAGTATCTGCATAAACAGCAAAGTACTCT
						
					

			
		

Sequences
Splice junction sequence	ATTGACTGCAGTTTGAAGGGGCTCATTAATAGTAATCCAGTTCTTCACTCTATCCCCAAAACTT GCAAAGCAAGTATCTGCATAAACAGCAAAGTACTCTtttatagcctgagcaactgacgcaagat atcctttgaaatagcgaactctcagtttgtcatctagcatctcatgtaacggcaagttatcatt atcttcat
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 802 Transcript exons: ,2895600-2895708,2896500-2896599,2896691-2896725,2896812 -2897026,2899091-2899206,2899657-2899882 TTTATAGCCTGAGCAACTGACGCAAGATATCCTTTGAAATAGCGAACTCTCAGTTTGTCATCTA GCATCTCATGTAACGGCAAGTTATCATTATCTTCATCATCCATACCATTCTCTGTGACAAATAT CGGAGTAGCATATTTTTGTGATACATAATTGAGAATCTTCCGTAGACCCCAGGGAACAACATAG AGCCACTCTGATGCTGCCTTCTCACCTATGGCCTGGCCACCTTCCCATTCCACAATTCTCTCCA TCTCTTGCACCTTGTAGTAATGGTTTTCTTCGGCGCATTCTGTCACATGAGAAATAAACCTTGA CGTATAGTGATTTAGACCAATAAAGTCCAAAGCATTCAAAAGAATTTTCTTATCCTCCTCTGAA AACTTGGGAAGCTGATCTCCAAGTCTTTCACGCATAACTTCAGGATAGTCTCCATAATATAGTG GATGCAAGAACCAGCCAAGCTGAAAATCCAGGCGTCTTGCAGCAGCAGATTTATCTTCAATCTT ATCGGAATTAGCCTCTGCCCATTCACAATCTACCACAAAGCCCACTTGTCCCCCTTGCTTATCC TTGTATTTGCTCCGGTATATGGAAACAGCTGCTGCATGGGCCAAAATCTGATGATGTGCTGCCA AATATGGCTCTATAAGAGAATTTTCTCGTCTTCCTGGAGCAAAAATTGCAACATCATACCCATT GACTGCAGTTTGAAGGGGCTCATTAATAGTAATCCAGTTCTTCACTCTATCCCCAAAACTTGCA AAGCAAGTATCTGCATAAACAGCAAAGTACTCT
Genomic sequence	TTTATAGCCTGAGCAACTGACGCAAGATATCCTTTGAAATAGCGAACTCTCAGTTTGTCATCTA GCATCTCATGTAACGGCAAGTTATCATTATCTTCATCATCCATACCTGCCAAATGGAAATCCGG CCTCAGATCATAGAAGAGAACAATTTCATAATGGATTTGCACATACGTATACTGGATAGAACTA TCATTGTGGTTTCTCTGTGAACCTCTCTCCACTTGTGTTTTTTCTACTTAAGTTTGTTACTTTT CCATATAATTTGGAGAGCTTTTTTTTTTTCTGTACTTTCCTTTAATTCCATATTAGAGCAAAGG TATTGGATTTTGATGTGGGGTTTATAATATAGACTTGCGCTCTCGTATCATTATAGATAGGCAT TGTGGTGGGAGACTCTCAAGGTTCTTATCAATTGGTATCAAAGTGTTCCACCTTGTCTAATGCA GGGGGCAACGTCAACATTGCAATGTTTACCTAATACTAGTTAAGTAGTTATGGTAGAGCCACAT AGGTGCCAGGGCAGCAGAGCATGGTGGAATATTTGAATCCAAAAGCAAAATATGGAACTTGAAC CCCAAATTGGAAGAATGGGATTTTGTAGAATTCAAGGTTCCGATCAAAATTGCAAACCATAAAC TTGACCACATTACATTCCAACCCTTTTCTTTTTCTTTTGACTAACTATTAACTTATCATCGTTT AGTGCATCGAACAATTCTTAATTGCCACTATATAGTCAGATTCAATACATGGATTTAACCAAAC AAATAACAATACTAGTAATGCCTTTCACTTGACATCTGATTTCTTCATCACTTTTTCTCTTTAT CTGTTTATACTCTACCTGTTTTCTTGCCTAATTTATAGGAACTAGGAAGGATGAGTATAGTTAC GTACCATTCTCTGTGACAAATATCGGAGTAGCATATTTTTGTGATACATAATTGAGAATCTTCC GTAGACCCCAGGGAACAACATAGAGCCACTCTGATGCTGCCTGTTATATCCACACAGAATATAA AACTAGAATGTTTGGCCTTGTATATGCAAATGTATACAACAAGCACGTTGAGAGAGAGAGTACA CACCTTCTCACCTATGGCCTGGCCACCTTCCCATTCCACTGTTGACAGAACACAATTATCAAGG AGAATTCGTTGTGTAAGATATTTTAGAAAATGAGAAAATGTTCCAATTATTATTTATTACCAAT TCTCTCCATCTCTTGCACCTTGTAGTAATGGTTTTCTTCGGCGCATTCTGTCACATGAGAAATA AACCTTGACGTATAGTGATTTAGACCAATAAAGTCCAAAGCATTCAAAAGAATTTTCTTATCCT CCTCTGAAAACTTGGGAAGCTGATCTCCAAGTCTTTCACGCATAACTTCAGGATAGTCTCCATA ATATAGTGGATGCAAGAACCTGAATTAAAAATATATTTTAACATAATGTCTTCAACCTGCTATC CTATACAAGCCTCATATTCTATTTTGCGTAATTTTCTTCACCGTCAATTTATCTTCAATTTCCA GTGTGCATCAGGGTCAAAGAAAAAATGAATATTGGTTTGTCTTCATTAACTTTGTGGTGTTAAG TAGAAAAATAGAAAGAAAAGGTTTCAAATCAAGACCATCAGTTGAATTGAGTTCAACAGTTTAT AACATCATGATAAGGAATTCTAATGGAGGTGCTCCATTGAAATAAATTTTAAGTAAAGTGATTT GGTAGTTCGAGACTATAACAGCCAAAGCTTTCGGGAGACAATGATTGTACTTCACTATGAATGA TTGATTACAATGCAGAGGTATAAATAAAAAAATTGGTCAACATCTGTACACAGGCCAAAATCAG AGGAGATAATATCCTCTTAAATGGCAGCAAACTATAAAAGGAAAGAATATACAGGTTATCCTAA AAAATTAACAAAGGGATATTATCCTAGTTGTACAAATCATAATTGGATGATTCTGATCGGTGCT AGATATCAGGAAACAATCTTCTAAATTAAGAACAGATCACCAACACGCCCCTCAAGCTACGTTA TAGATGTCTATCATACCCAAATTGGATTTGAATCTAATGATTTCATAAGTGCAGCTTGGAAGAG CTTTGGTTAAAATATCTGCAGTATGGATGCATGAGGGCACAAGACAGATGATTCCATGGTCAAT CTTTTTTTTATGAAATGATAGTCAATTTCCACATGCTTTGTTATGTCAGGATTCAGAAGGGCTC TTTTCTTTCCCCTTCATTAGAGTGAGCTTTCCACCCAAAGCATCATCCTTTCTTTACATCTTTA GATGAAATGAAAGACCACTTCCCTCTCTTTCTTTTGAATACGCCTTGTGTCATGATTAAGATAC TTTCATTGCACCATCTAACAATCTTGAAATCCACCCTGGATGCCTTTTTCTTTGAAGAAAGCCT CTCTCTCTCTCTCTCTCTTCATTCAATAGCTATGGTTGTCCATTTCAATAAGGATAGTCCTCGC CTCATGAGCTAGCTTTTGAGACTAAATTAGGCCCAACCAAAATTCAAGAAACTCTCCCAGAGTG ATCTATTCTTTGTCATCAATTATTGAATTACAAGAATAAAGCCTTGACCCTCTTCTTGAAAAAC CTTCCTCGTGCTTTGAAAAGGAGCAATTCTCGTCTGTTCAATTTCTATGAACAATTTCTTTTGG CCTCCCAAGCTAATCCTTTTTGTCAAATCTTCAAGGTTAGATTTAATGTCCCCAAAAGAAGCCA GTCAGTCAAGCCCTAACACCACATCAGCTCCTTCCCCAATCTCATTTCCTTTCCTTTCCTCTTC AACCTCTCCTAGTATTTGGATTTGGACTTAGGGCCTAAGTCAACCGCACAAATTAGCTTGTAAG GGAATGATTGTCTAAGCTTTATAAGGACTAGTTTAGTCATATCTCTAATCGATGTGAGATCTCA ACCCCTAAGAGTCAGCATCCTAATGGTTGTACTCTACGATACTTCACTCATTTCTGGTCAGACC CTCCATAGGTTGCCCTTTCTAAGACACTGGAAACCAACTCTTATAGGCCGCAATTAAGACAACT TTCTAGCATACCATCTTAGAATTTGGGCTTTAGGACCTAACTCAATCACACAAAATCGCTTTGT AAGATAAGGATTGTCTAAGCTTTATAAGGACTACATTGGTCATATCTCTAGTCAATGTGAGATC TCCACTTCAACATCCTGACAGTTGTTCATGAACTGAACTATACCAGTGTAACTTTTTTTTTAGT CAGCCAAAAGAAAATATTATTAATAAAGAAAAGGGTACCAGAGGTACCTAAACATTACAATAGA GTCTACTAGTTTAACTTATACCCACAGTTATACACTCAATTTTTTAAAGAATGTGATTTTTTTT TTTGTTACAATAGAATGTGATCTATGTCAATGCAACCGTTGAATGTGTCAATCTCTTATTATTA TAATAATAATATGGAACAAATGAATGAGGAACTACCAGCCAAGCTGAAAATCCAGGCGTCTTGC AGCAGCAGATTTATCTTCAATCTTATCGGAATTAGCCTCTGCCCATTCACAATCTACCACAAAG CCCACTTGTCCCCCTTGCTTATCCTGGAATGTCAAGACATATTTAGAAAGAATAAATTATACCT TCACAACATTTTTCTAACATGGTTAGCATTAAATTATATATTTAAACAAAATTCACAGATAATT TGATAATTAATAACAACAGCAATACCCTACTGGCTACAACCAAGTGGGATTTGGATATACGGAT CGATCAACTCCATTGGCTCCATCAAAATCTACCTTTTCACTCAAACATTTTTTTTTTATAGTTT CTACTAATGTTTTCTTAGATCTGAGCTTACGCAGATAATTGAAATACAGAAAATCATGCTGGTA ATTTATAGATCGAAAAAAATAACAAAAATAGGCAATTAATGGAAAATCAAGAAAATACACAATA GGGAGGAGTGGCAGAAGCAACAAAGTAAAAGTAATCCAACTTGCAAAATAGAAAGTTTTGTGTA GAAATGAATAAGTGCAGTCCTGCACCTTGTATTTGCTCCGGTATATGGAAACAGCTGCTGCATG GGCCAAAATCTGATGATGTGCTGCCAAATATGGCTCTATAAGAGAATTTTCTCGTCTTCCTGGA GCAAAAATTGCAACATCATACCCATTGACTGCAGTTTGAAGGGGCTCATTAATAGTAATCCAGT TCTTCACTCTATCCCCAAAACTTGCAAAGCAAGTATCTGCATAAACAGCAAAGTACTCT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.356906369

Conservation Information
Conserved circRNAs	NA
PMCS	0.356906369

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							2897018-2895616(+)
2896988-2895602(-)
						
						Potential amino acid sequence
						
							MQEPAKLKIQASCSSRFIFNLIGISLCPFTIYHKAHLSPLLILVFAPVYGNSCCMGQNLMMCCQ
IWLYKRIFSSSWSKNCNIIPIDCSLKGLINSNPVLHSIPKTCKASICINSKVLFYSLSN*(+)
MRERLGDQLPKFSEEDKKILLNALDFIGLNHYTSRFISHVTECAEENHYYKVQEMERIVEWEGG
QAIGEKAASEWLYVVPWGLRKILNYVSQKYATPIFVTENGMDDEDNDNLPLHEMLDDKLRVRYF
KGYLASVAQAIKEYFAVYADTCFASFGDRVKNWITINEPLQTAVNGYDVAIFAPGRRENSLIEP
YLAAHHQILAHAAAVSIYRSKYKDKQGGQVGFVVDCEWAEANSDKIEDKSAAARRLDFQLGWFL
HPLYYGDYPEVMRERLGDQLPKFSEEDKKILLNALDFIGLNHYTSRFISHVTECAEENHYYKVQ
EMERIVEWEGGQAIGEKAASEWLYVVPWGLRKILNYVSQKYATPIFVTENGMDDEDNDNLPLHE
MLDDKLRVRYFKGYLASVAQAIKEYFAVYADTCFASFGDRVKNWITINEPLQTAVNGYDVAIFA
PGRRENSLIEPYLAAHHQILAHAAAVSIYRSKYKDKQGGQVGFVVDCEWAEANSDKIEDKSAAA
RRLDFQLGWFLHPLYYGDYPEVMRERLGDQLPKFSEEDKKILLNALDFIGLNHYTSRFISHVTE
CAEENHYYKVQEMERIVEWEGGQAIGEKAASEWLYVVPWGLRKILNYVSQKYATPIFVTENGMD
DEDNDNLPLHEMLDDKLRVRYFKGYLASVAQAIKEYFAVYADTCFASFGDRVKNWITINEPLQT
AVNGYDVAIFAPGRRENSLIEPYLAAHHQILAHAAAVSIYRSKYKDKQGGQVGFVVDCEWAEAN
SDKIEDKSAAARRLDFQLGWFLHPLYYGDYPEVMRERLGDQLPKFSEEDKKILLNALDFIGLNH
YTSRFISHVTECAEENHYYKVQEMERIVEWEGGQAIGEKAASEWLYVVPWGLRKILNYVSQKYA
TPIFVTENGMDDEDNDNLPLHEMLDDKLRVRYFKGYLASVAQAI(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	2897018-2895616(+) 2896988-2895602(-)
Potential amino acid sequence	MQEPAKLKIQASCSSRFIFNLIGISLCPFTIYHKAHLSPLLILVFAPVYGNSCCMGQNLMMCCQ IWLYKRIFSSSWSKNCNIIPIDCSLKGLINSNPVLHSIPKTCKASICINSKVLFYSLSN*(+) MRERLGDQLPKFSEEDKKILLNALDFIGLNHYTSRFISHVTECAEENHYYKVQEMERIVEWEGG QAIGEKAASEWLYVVPWGLRKILNYVSQKYATPIFVTENGMDDEDNDNLPLHEMLDDKLRVRYF KGYLASVAQAIKEYFAVYADTCFASFGDRVKNWITINEPLQTAVNGYDVAIFAPGRRENSLIEP YLAAHHQILAHAAAVSIYRSKYKDKQGGQVGFVVDCEWAEANSDKIEDKSAAARRLDFQLGWFL HPLYYGDYPEVMRERLGDQLPKFSEEDKKILLNALDFIGLNHYTSRFISHVTECAEENHYYKVQ EMERIVEWEGGQAIGEKAASEWLYVVPWGLRKILNYVSQKYATPIFVTENGMDDEDNDNLPLHE MLDDKLRVRYFKGYLASVAQAIKEYFAVYADTCFASFGDRVKNWITINEPLQTAVNGYDVAIFA PGRRENSLIEPYLAAHHQILAHAAAVSIYRSKYKDKQGGQVGFVVDCEWAEANSDKIEDKSAAA RRLDFQLGWFLHPLYYGDYPEVMRERLGDQLPKFSEEDKKILLNALDFIGLNHYTSRFISHVTE CAEENHYYKVQEMERIVEWEGGQAIGEKAASEWLYVVPWGLRKILNYVSQKYATPIFVTENGMD DEDNDNLPLHEMLDDKLRVRYFKGYLASVAQAIKEYFAVYADTCFASFGDRVKNWITINEPLQT AVNGYDVAIFAPGRRENSLIEPYLAAHHQILAHAAAVSIYRSKYKDKQGGQVGFVVDCEWAEAN SDKIEDKSAAARRLDFQLGWFLHPLYYGDYPEVMRERLGDQLPKFSEEDKKILLNALDFIGLNH YTSRFISHVTECAEENHYYKVQEMERIVEWEGGQAIGEKAASEWLYVVPWGLRKILNYVSQKYA TPIFVTENGMDDEDNDNLPLHEMLDDKLRVRYFKGYLASVAQAI(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chen et al., 2018

circRNA

Detail information of GLYMA_U017400_circ_g.2

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