Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G05890_circ_g.1 |
ID in PlantcircBase | ath_circ_000890 |
Alias | Ath_circ_FC0201 |
Organism | Arabidpsis thaliana |
Position | chr1: 1779786-1780145 JBrowse» |
Reference genome | TAIR10.38 |
Type | ei-circRNA |
Identification method | find_circ |
Parent gene | AT1G05890 |
Parent gene annotation |
RING/U-box superfamily protein |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 14 |
Tissues | whole_plant |
Exon boundary | Yes-No |
Splicing signals | GT-AA |
Number of exons covered | AT1G05890.2:2 AT1G05890.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.148706944 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017a |