Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d047289_circ_g.1 |
ID in PlantcircBase | zma_circ_005944 |
Alias | Rdr_test_circ_001400 |
Organism | Zea mays |
Position | chr9: 125640020-125640199 JBrowse» |
Reference genome | AGPv4.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d047289 |
Parent gene annotation |
Nuclear transport factor 2 (NTF2) family protein with RNA bindin g (RRM-RBD-RNP motifs) domain |
Parent gene strand | + |
Alternative splicing | Zm00001d047289_circ_g.2 |
Support reads | NA |
Tissues | root |
Exon boundary | No-No |
Splicing signals | GT-TA |
Number of exons covered | Zm00001d047289_T004:1 Zm00001d047289_T003:1 Zm00001d047289_T002:2 Zm00001d047289_T001:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.144906574 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |