Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os01g0200700_circ_g.10 |
ID in PlantcircBase | osa_circ_040378 |
Alias | NA |
Organism | Oryza sativa |
Position | chr1: 5478858-5479299 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | i-circRNA |
Identification method | CIRI-long |
Parent gene | Os01g0200700 |
Parent gene annotation |
Similar to Metallothionein-like protein type 3 (MT-3) (MWMT3). ( Os01t0200700-01) |
Parent gene strand | + |
Alternative splicing | Os01g0200700_circ_g.1 Os01g0200700_circ_g.2 Os01g0200700_circ_g.3 Os01g0200700_circ_g.4 Os01g0200700_circ_g.5 Os01g0200700_circ_g.6 Os01g0200700_circ_g.7 Os01g0200700_circ_g.8 Os01g0200700_circ_g.9 Os01g0200700_circ_g.11 Os01g0200700_circ_g.12 Os01g0200700_circ_g.13 Os01g0200700_circ_g.14 Os01g0200700_circ_g.15 Os01g0200700_circ_g.16 Os01g0200700_circ_g.17 Os01g0200700_circ_g.18 |
Support reads | NA |
Tissues | leaf |
Exon boundary | NA-NA |
Splicing signals | GT-AG |
Number of exons covered | 0 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.141375302 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | this study |