Plant Circular RNA Database

Detail information of AT5G48310_circ_g.1

			
						 General Information
					
						CircRNA Name
						AT5G48310_circ_g.1
					
						ID in PlantcircBase
						ath_circ_043051
					
						Alias
						Ath_circ_FC3717
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr5: 19576331-19579849  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							AT5G48310						
					
						Parent gene annotation
						
							Portal protein
							
						Parent gene strand
						-
					
						Alternative splicing
						
							AT5G48310_circ_g.2 AT5G48310_circ_g.3 AT5G48310_circ_g.4 AT5G48310_circ_g.5 AT5G48310_circ_g.6 AT5G48310_circ_g.7 AT5G48310_circ_g.8 AT5G48310_circ_g.9 AT5G48310_circ_g.10 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT5G48310.2:14
AT5G48310.1:13

General Information
CircRNA Name	AT5G48310_circ_g.1
ID in PlantcircBase	ath_circ_043051
Alias	Ath_circ_FC3717
Organism	Arabidpsis thaliana
Position	chr5: 19576331-19579849 JBrowse»
Reference genome	TAIR10.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	AT5G48310
Parent gene annotation	Portal protein
Parent gene strand	-
Alternative splicing	AT5G48310_circ_g.2 AT5G48310_circ_g.3 AT5G48310_circ_g.4 AT5G48310_circ_g.5 AT5G48310_circ_g.6 AT5G48310_circ_g.7 AT5G48310_circ_g.8 AT5G48310_circ_g.9 AT5G48310_circ_g.10
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT5G48310.2:14 AT5G48310.1:13

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CCTTTTCAATCTCTAAGCTGATGCTATCTTCTTGTCCACTTTCCATTATAGGTGGAGCACTTGG
AGTTCGTATATCCTCTAAATCCCAATACACCGAACCcttttctgctctgcatcggtcaagtagt
ctaagttccatatcatgtatccaaaccattatgtagttgtggaacaaccccctagagtctacac
caccatgt

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTTTTCTGCTCTGCATCGGTCAAGTAGTCTAAGTTCCATATCATGTATCCAAACCATTATGTAG
TTGTGGAACAACCCCCTAGAGTCTACACCACCATGTACTGGGCTGTGTAATATAAAATGAAACG
GTTAAAGAGAAAGAATGAGTTCCCACAAATATTGTGATTGATTCCGAAATGATAATGTCAAACC
TGATTCCCCATGAATCGAGGTTTCTTTCAAAATCTGAAACTGCTATGAGAAGCTCATTGACATG
AGGCAGTGGGCAGGATGGTGGAACTGCTGACAGAAATGCTCTGAGCCGGTGACACAGCTGAGTG
CTGTATACGACAGCAGCTAGATTCGCTAGGTCGATTGAGCTTGAACGATAAACAAGGTAATGAG
AACATAAGACCAAATCAATATCAAGACTCAGAGATAATCTCAAGATGAAAACCAGATGACAAAT
GTAAGTTCTTTGTTCGGATTGAATCATTTTACCTTGGGAGTACATGCTCATTGGTGATCTTTAT
ATCAGCCTCTATCTCATTGCTTATGATTAGAAAAAGATTCTTCATTTTCAGGTAGGCTGTAGAA
ATTGTGACGGAGTCCAAAAGAAAACCTTCAGAGTTGCAGGAAACATACTCATCGGTATCAACCA
TGTGCTTCCGACACCTCTTCTTTGCTGCTGTCTGCAGTAGGTTTTCCATATGACAAGAAAATCG
TGAACATCATAGCCTTGATATGTTACAAAATCAAGACAACTTAAAGGTATGAAATGTGTATACT
ATTTGAAAAGAACAGGTTTAAAGGTCTCTTAGTGGTAGACTTTCTTAATGATAGGAGAACATAT
GAAGGTTGTTGAAAACTTGAAATATTTTACCTGGAGGTAATTCTTCAAAGTTTCTTGTGCTTCT
GGAGACAATATATCATGAAGGAGGGTAAAAACCTGAACAGCTGAAGAAAGTGCTGTTGTTGCCG
ATACTTGCACCGGACAAGATATGTCTGCCAATCCTGAAGGGAAGTTTTCATCTAAGGACTTGTA
GTTCTCAAAAACAGTTGCCATGAGTTTTTCTATCTCTATTTCACAATCCATTAAGATACTTTTC
TGCAAAAATAGAACAAGTCTTCAATAAATATTCCTAGGGAGCCATGAAGATAACAAAACCAGCA
AATTTCAAACTAAATGCAATAATTCGAATCCAAGTTCATGATTTTGGTGAGATGTCAGATTCAT
CAATTTACAAACAAAATGGGAATTACCTCTTGTCTGGTTAAACTCTTCTCACTTCGAGCCATTA
GGATGGGCACAAGTAACTCATGAACAAGTTGTAAGCAGGTTTTTGTTGGAGTTGCCACATTCAT
TACATGTGAGAGATATCTGAAAAGTTTGGTGCAGCATATTTGAGCTAAATTCCAGACGAATTAC
AATAGATACAAGGAAATCTAACTGAAATATCTTTATGAATACCTCAACTTGGTATATGAATCAG
AAACTCCATAATAATCTGCGAATTCGCTTAACAGCCATTTCCAAGATCCATCCAGCCTTAAGTT
TTGAGGATGGAATTTTTGGGCACGTGTAGCCGCTTCTAGTAGCAAATCATATGCTAGTGTCTCC
ACAACAGGTGCGTTCTAGAATATACAGAAATGCAAAACATAAGTTAACTCACTGAACAAAACAG
ATAATGGGAGATTGTGTTGGAGAAAGAACATACCTTTATGTGACAGTCTTCATCGGACGTGGTT
GTGCTACCAATAAAGAGCTGGATCTTGCCAACACATTCTTGTTCACCATGGTATATAGGCCACC
ATCTGACATTATCATTCTAGACAAATATAGAGTTTTCTTCAGTATATCTAGTTAACATATTCTC
AGAAGCAAAATGGAAGAGATTTAACTCGGGAAGGACAACTAAAGGCGTATTTACCGGATTTTCA
GTTAATGATGTGATAGAAATCATTGCTTTTCCTTGAACTGATTTCTTCTTATCTTGAACTTCTA
TCATAAGAGCGTCGCCTTCGGACTCAGGAAAGCTGAAGGAGCAGTTGTGAGTAAAACTCTATGT
ACTCAGAAAACTATAAAACTAGATTGTGGTACTTTCCATGAAAGTTTCATTTATTTAAACACTA
TGGTTACATGTAATTCAAATTTTCTCAAACAACCACTAGCATACACATTTACTGATTTTCAATA
GAAATAAAAGAACTTACAAGACATGGTAACTTCCAGTTCCTGACTGCAAACAAACAGAAGATCC
TTGTTCAATTTGACCACCTTCTGCTGTGCTCTTCATTTGAAGGTAGCAAGAGAATTGTTCTGCA
GGTAGAATAAGTCGTGTCATCTCATATCAATAAAGGGCTTATCTAACAAATGTTATCTTCCATT
TAGTAAACTGTGTCAAACCAGTGGACAAATCACATATTAACCGCCTAAGAAAATTAAATTCATA
ACCAAATATCAAAAGCAAACCTTCTGAAACTGCTGAAAGGGTAGCCTGTTTAATAGAAGTCATC
CCAGTTTTTACAAGTGATGAAACTTGTCTGCAATACTCTGCCCCCATTCCTATTTGCATATTCA
TTAAACTCCGCAGCGAATCTGTGCCTCTAAGTTTTCGCTGTGGTATCAATCGAAGTCTCTTTAC
TAAAACAATAAAAAATTGAAGAGGTATAAATATCTGATTCATGTCAGGCAGCTACAAAATCATC
AGAAAAACTGATAGTTTACCTTCCACCCTTAACTTTCTGACAACGTTTTTAGACTTTAAGGATG
GCTTTGGCTCCGCTTTCACATTGTTGTTTTTCTCAGACGATCGTACACCCCGAGGTTGTAAGAG
AAACTTGTGCAAACTATAACAACACATAAACAAAAAGGACTAGTTCAATAACTCAACATAAGCC
AAATAAGTAATATATCTCAGAAACCATAAAGAAACACATGCCCCTACCCAAATGCACCTCGAAG
AATACGACACTCATCACGCAGAAACTCAGACGCCTCAGTAGAACCCTTTGACCATTCATACAAA
CATAGTCTTATACAAGCATCATATGCCAAAAGACTTTGCCAAGCATATTGACCACTGTCATTAG
AAACATTTTGTAAGAAACCATAATAAAGTTCAACTCTTTCATTATAACCTCTGAAATAAAATAA
GTACTGAACCTGATACTATGGCACTCTTCTAATTCATCTGAGCAAATTTCCGAGATTTTCGAAT
CTTCCACAGTTTTACTGTCCTTCACACTACACCAAACCATGATTAAACACATCAAAACTAGTCC
GCAGAACGAAATTACAAAAAATCTCGTTAAATTCGGAAAATACCTTTCACCAAATTCTTCAACT
CTATACAAATGTGAACTGCTTCTCATGCTTTCTTGCTTACTACTCTCTACTCCTGCTTCTCCAC
AAATCTCATCCTCAATCTTCTGAATGTCCTTTTCAATCTCTAAGCTGATGCTATCTTCTTGTCC
ACTTTCCATTATAGGTGGAGCACTTGGAGTTCGTATATCCTCTAAATCCCAATACACCGAACC
						
					

			
		

Sequences
Splice junction sequence	CCTTTTCAATCTCTAAGCTGATGCTATCTTCTTGTCCACTTTCCATTATAGGTGGAGCACTTGG AGTTCGTATATCCTCTAAATCCCAATACACCGAACCcttttctgctctgcatcggtcaagtagt ctaagttccatatcatgtatccaaaccattatgtagttgtggaacaaccccctagagtctacac caccatgt
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTTTTCTGCTCTGCATCGGTCAAGTAGTCTAAGTTCCATATCATGTATCCAAACCATTATGTAG TTGTGGAACAACCCCCTAGAGTCTACACCACCATGTACTGGGCTGTGTAATATAAAATGAAACG GTTAAAGAGAAAGAATGAGTTCCCACAAATATTGTGATTGATTCCGAAATGATAATGTCAAACC TGATTCCCCATGAATCGAGGTTTCTTTCAAAATCTGAAACTGCTATGAGAAGCTCATTGACATG AGGCAGTGGGCAGGATGGTGGAACTGCTGACAGAAATGCTCTGAGCCGGTGACACAGCTGAGTG CTGTATACGACAGCAGCTAGATTCGCTAGGTCGATTGAGCTTGAACGATAAACAAGGTAATGAG AACATAAGACCAAATCAATATCAAGACTCAGAGATAATCTCAAGATGAAAACCAGATGACAAAT GTAAGTTCTTTGTTCGGATTGAATCATTTTACCTTGGGAGTACATGCTCATTGGTGATCTTTAT ATCAGCCTCTATCTCATTGCTTATGATTAGAAAAAGATTCTTCATTTTCAGGTAGGCTGTAGAA ATTGTGACGGAGTCCAAAAGAAAACCTTCAGAGTTGCAGGAAACATACTCATCGGTATCAACCA TGTGCTTCCGACACCTCTTCTTTGCTGCTGTCTGCAGTAGGTTTTCCATATGACAAGAAAATCG TGAACATCATAGCCTTGATATGTTACAAAATCAAGACAACTTAAAGGTATGAAATGTGTATACT ATTTGAAAAGAACAGGTTTAAAGGTCTCTTAGTGGTAGACTTTCTTAATGATAGGAGAACATAT GAAGGTTGTTGAAAACTTGAAATATTTTACCTGGAGGTAATTCTTCAAAGTTTCTTGTGCTTCT GGAGACAATATATCATGAAGGAGGGTAAAAACCTGAACAGCTGAAGAAAGTGCTGTTGTTGCCG ATACTTGCACCGGACAAGATATGTCTGCCAATCCTGAAGGGAAGTTTTCATCTAAGGACTTGTA GTTCTCAAAAACAGTTGCCATGAGTTTTTCTATCTCTATTTCACAATCCATTAAGATACTTTTC TGCAAAAATAGAACAAGTCTTCAATAAATATTCCTAGGGAGCCATGAAGATAACAAAACCAGCA AATTTCAAACTAAATGCAATAATTCGAATCCAAGTTCATGATTTTGGTGAGATGTCAGATTCAT CAATTTACAAACAAAATGGGAATTACCTCTTGTCTGGTTAAACTCTTCTCACTTCGAGCCATTA GGATGGGCACAAGTAACTCATGAACAAGTTGTAAGCAGGTTTTTGTTGGAGTTGCCACATTCAT TACATGTGAGAGATATCTGAAAAGTTTGGTGCAGCATATTTGAGCTAAATTCCAGACGAATTAC AATAGATACAAGGAAATCTAACTGAAATATCTTTATGAATACCTCAACTTGGTATATGAATCAG AAACTCCATAATAATCTGCGAATTCGCTTAACAGCCATTTCCAAGATCCATCCAGCCTTAAGTT TTGAGGATGGAATTTTTGGGCACGTGTAGCCGCTTCTAGTAGCAAATCATATGCTAGTGTCTCC ACAACAGGTGCGTTCTAGAATATACAGAAATGCAAAACATAAGTTAACTCACTGAACAAAACAG ATAATGGGAGATTGTGTTGGAGAAAGAACATACCTTTATGTGACAGTCTTCATCGGACGTGGTT GTGCTACCAATAAAGAGCTGGATCTTGCCAACACATTCTTGTTCACCATGGTATATAGGCCACC ATCTGACATTATCATTCTAGACAAATATAGAGTTTTCTTCAGTATATCTAGTTAACATATTCTC AGAAGCAAAATGGAAGAGATTTAACTCGGGAAGGACAACTAAAGGCGTATTTACCGGATTTTCA GTTAATGATGTGATAGAAATCATTGCTTTTCCTTGAACTGATTTCTTCTTATCTTGAACTTCTA TCATAAGAGCGTCGCCTTCGGACTCAGGAAAGCTGAAGGAGCAGTTGTGAGTAAAACTCTATGT ACTCAGAAAACTATAAAACTAGATTGTGGTACTTTCCATGAAAGTTTCATTTATTTAAACACTA TGGTTACATGTAATTCAAATTTTCTCAAACAACCACTAGCATACACATTTACTGATTTTCAATA GAAATAAAAGAACTTACAAGACATGGTAACTTCCAGTTCCTGACTGCAAACAAACAGAAGATCC TTGTTCAATTTGACCACCTTCTGCTGTGCTCTTCATTTGAAGGTAGCAAGAGAATTGTTCTGCA GGTAGAATAAGTCGTGTCATCTCATATCAATAAAGGGCTTATCTAACAAATGTTATCTTCCATT TAGTAAACTGTGTCAAACCAGTGGACAAATCACATATTAACCGCCTAAGAAAATTAAATTCATA ACCAAATATCAAAAGCAAACCTTCTGAAACTGCTGAAAGGGTAGCCTGTTTAATAGAAGTCATC CCAGTTTTTACAAGTGATGAAACTTGTCTGCAATACTCTGCCCCCATTCCTATTTGCATATTCA TTAAACTCCGCAGCGAATCTGTGCCTCTAAGTTTTCGCTGTGGTATCAATCGAAGTCTCTTTAC TAAAACAATAAAAAATTGAAGAGGTATAAATATCTGATTCATGTCAGGCAGCTACAAAATCATC AGAAAAACTGATAGTTTACCTTCCACCCTTAACTTTCTGACAACGTTTTTAGACTTTAAGGATG GCTTTGGCTCCGCTTTCACATTGTTGTTTTTCTCAGACGATCGTACACCCCGAGGTTGTAAGAG AAACTTGTGCAAACTATAACAACACATAAACAAAAAGGACTAGTTCAATAACTCAACATAAGCC AAATAAGTAATATATCTCAGAAACCATAAAGAAACACATGCCCCTACCCAAATGCACCTCGAAG AATACGACACTCATCACGCAGAAACTCAGACGCCTCAGTAGAACCCTTTGACCATTCATACAAA CATAGTCTTATACAAGCATCATATGCCAAAAGACTTTGCCAAGCATATTGACCACTGTCATTAG AAACATTTTGTAAGAAACCATAATAAAGTTCAACTCTTTCATTATAACCTCTGAAATAAAATAA GTACTGAACCTGATACTATGGCACTCTTCTAATTCATCTGAGCAAATTTCCGAGATTTTCGAAT CTTCCACAGTTTTACTGTCCTTCACACTACACCAAACCATGATTAAACACATCAAAACTAGTCC GCAGAACGAAATTACAAAAAATCTCGTTAAATTCGGAAAATACCTTTCACCAAATTCTTCAACT CTATACAAATGTGAACTGCTTCTCATGCTTTCTTGCTTACTACTCTCTACTCCTGCTTCTCCAC AAATCTCATCCTCAATCTTCTGAATGTCCTTTTCAATCTCTAAGCTGATGCTATCTTCTTGTCC ACTTTCCATTATAGGTGGAGCACTTGGAGTTCGTATATCCTCTAAATCCCAATACACCGAACC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.10591571

Conservation Information
Conserved circRNAs	NA
PMCS	0.10591571

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							19579796-19576333(-)
						
					

						Potential amino acid sequence
						
							MESGQEDSISLEIEKDIQKIEDEICGEAGVESSKQESMRSSSHLYRVEEFGESVKDSKTVEDSK
ISEICSDELEECHSISGQYAWQSLLAYDACIRLCLYEWSKGSTEASEFLRDECRILRGAFGLHK
FLLQPRGVRSSEKNNNVKAEPKPSLKSKNVVRKLRVEVKRLRLIPQRKLRGTDSLRSLMNMQIG
MGAEYCRQVSSLVKTGMTSIKQATLSAVSEEQFSCYLQMKSTAEGGQIEQGSSVCLQSGTGSYH
VFFPESEGDALMIEVQDKKKSVQGKAMISITSLTENPNDNVRWWPIYHGEQECVGKIQLFIGST
TTSDEDCHIKNAPVVETLAYDLLLEAATRAQKFHPQNLRLDGSWKWLLSEFADYYGVSDSYTKL
RYLSHVMNVATPTKTCLQLVHELLVPILMARSEKSLTRQEKSILMDCEIEIEKLMATVFENYKS
LDENFPSGLADISCPVQVSATTALSSAVQVFTLLHDILSPEAQETLKNYLQTAAKKRCRKHMVD
TDEYVSCNSEGFLLDSVTISTAYLKMKNLFLIISNEIEADIKITNEHVLPSSIDLANLAAVVYS
TQLCHRLRAFLSAVPPSCPLPHVNELLIAVSDFERNLDSWGISPVHGGVDSRGLFHNYIMVWIH
DMELRLLDRCRAEKGSVYWDLEDIRTPSAPPIMESGQEDSISLEIEKDIQKIEDEICGEAGVES
SKQESMRSSSHLYRVEEFGESVKDSKTVEDSKISEICSDELEECHSISGQYAWQSLLAYDACIR
LCLYEWSKGSTEASEFLRDECRILRGAFGLHKFLLQPRGVRSSEKNNNVKAEPKPSLKSKNVVR
KLRVEVKRLRLIPQRKLRGTDSLRSLMNMQIGMGAEYCRQVSSLVKTGMTSIKQATLSAVSEEQ
FSCYLQMKSTAEGGQIEQGSSVCLQSGTGSYHVFFPESEGDALMIEVQDKKKSVQGKAMISITS
LTENPNDNVRWWPIYHGEQECVGKIQLFIGSTTTSDEDCHIKNAPVVETLAYDLLLEAATRAQK
FHPQNLRLDGSWKWLLSEFADYYGVSDSYTKLRYLSHVMNVATPTKTCLQLVHELLVPILMARS
EKSLTRQEKSILMDCEIEIEKLMATVFENYKSLDENFPSGLADISCPVQVSATTALSSAVQVFT
LLHDILSPEAQETLKNYLQTAAKKRCRKHMVDTDEYVSCNSEGFLLDSVTISTAYLKMKNLFLI
ISNEIEADIKITNEHVLPSSIDLANLAAVVYSTQLCHRLRAFLSAVPPSCPLPHVNELLIAVSD
FERNLDSWGISPVHGGVDSRGLFHNYIMVWIHDMELRLLDRCRAEKGSVYWDLEDIRTPSAPPI
MESGQEDSISLEIEKDIQKIEDEICGEAGVESSKQESMRSSSHLYRVEEFGESVKDSKTVEDSK
ISEICSDELEECHSISGQYAWQSLLAYDACIRLCLYEWSKGSTEASEFLRDECRILRGAFGLHK
FLLQPRGVRSSEKNNNVKAEPKPSLKSKNVVRKLRVEVKRLRLIPQRKLRGTDSLRSLMNMQIG
MGAEYCRQVSSLVKTGMTSIKQATLSAVSEEQFSCYLQMKSTAEGGQIEQGSSVCLQSGTGSYH
VFFPESEGDALMIEVQDKKKSVQGKAMISITSLTENPNDNVRWWPIYHGEQECVGKIQLFIGST
TTSDEDCHIKNAPVVETLAYDLLLEAATRAQKFHPQNLRLDGSWKWLLSEFADYYGVSDSYTKL
RYLSHVMNVATPTKTCLQLVHELLVPILMARSEKSLTRQEKSILMDCEIEIEKLMATVFENYKS
LDENFPSGLADISCPVQVSATTALSSAVQVFTLLHDILSPEAQETLKNYLQTAAKKRCRKHMVD
TDEYVSCNSEGFLLDSVTISTAYLKMKNLFLIISNEIEADIKITNEHVLPSSIDLANLAAVVYS
TQLCHRLRAFLSAVPPSCPLPHVNELLIAVSDFERNLDSWGISPVHGGVDSRGLFHNYIMVWIH
DMELRLLDRCRAEKGSVYWDLEDIRTPSAPPIMESGQEDSISLEIEKDIQKIEDEICGEAGVES
SKQESMRSSSHLYRVEEFGESVKDSKTVEDSKISEICSDELEECHSISGQYAWQSLLAYDACIR
LCLYEWSKGSTEASEFLRDECRILRGAFGLHKFLLQPRGVRSSEKNNNVKAEPKPSLKSKNVVR
KLRVEVKRLRLIPQRKLRGTDSLRSLMNMQIGMGAEYCRQVSSLVKTGMTSIKQATLSAVSEEQ
FSCYLQMKSTAEGGQIEQGSSVCLQSGTGSYHVFFPESEGDALMIEVQDKKKSVQGKAMISITS
LTENPNDNVRWWPIYHGEQECVGKIQLFIGSTTTSDEDCHIKNAPVVETLAYDLLLEAATRAQK
FHPQNLRLDGSWKWLLSEFADYYGVSDSYTKLRYLSHVMNVATPTKTCLQLVHELLVPILMARS
EKSLTRQEKSILMDCEIEIEKLMATVFENYKSLDENFPSGLADISCPVQVSATTALSSAVQVFT
LLHDILSPEAQETLKNYLQTAAKKRCRKHMVDTDEYVSCNSEGFLLDSVTISTAYLKMKNLFLI
ISNEIEADIKITNEHVLPSSIDLANLAAVVYSTQLCHRLRAFLSAVPPSCPLPHVNELLIAVSD
FERNLDSWGISPVHGGVDSRGLFHNYIMVWIHDMELRLLDRCRAEK(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	19579796-19576333(-)
Potential amino acid sequence	MESGQEDSISLEIEKDIQKIEDEICGEAGVESSKQESMRSSSHLYRVEEFGESVKDSKTVEDSK ISEICSDELEECHSISGQYAWQSLLAYDACIRLCLYEWSKGSTEASEFLRDECRILRGAFGLHK FLLQPRGVRSSEKNNNVKAEPKPSLKSKNVVRKLRVEVKRLRLIPQRKLRGTDSLRSLMNMQIG MGAEYCRQVSSLVKTGMTSIKQATLSAVSEEQFSCYLQMKSTAEGGQIEQGSSVCLQSGTGSYH VFFPESEGDALMIEVQDKKKSVQGKAMISITSLTENPNDNVRWWPIYHGEQECVGKIQLFIGST TTSDEDCHIKNAPVVETLAYDLLLEAATRAQKFHPQNLRLDGSWKWLLSEFADYYGVSDSYTKL RYLSHVMNVATPTKTCLQLVHELLVPILMARSEKSLTRQEKSILMDCEIEIEKLMATVFENYKS LDENFPSGLADISCPVQVSATTALSSAVQVFTLLHDILSPEAQETLKNYLQTAAKKRCRKHMVD TDEYVSCNSEGFLLDSVTISTAYLKMKNLFLIISNEIEADIKITNEHVLPSSIDLANLAAVVYS TQLCHRLRAFLSAVPPSCPLPHVNELLIAVSDFERNLDSWGISPVHGGVDSRGLFHNYIMVWIH DMELRLLDRCRAEKGSVYWDLEDIRTPSAPPIMESGQEDSISLEIEKDIQKIEDEICGEAGVES SKQESMRSSSHLYRVEEFGESVKDSKTVEDSKISEICSDELEECHSISGQYAWQSLLAYDACIR LCLYEWSKGSTEASEFLRDECRILRGAFGLHKFLLQPRGVRSSEKNNNVKAEPKPSLKSKNVVR KLRVEVKRLRLIPQRKLRGTDSLRSLMNMQIGMGAEYCRQVSSLVKTGMTSIKQATLSAVSEEQ FSCYLQMKSTAEGGQIEQGSSVCLQSGTGSYHVFFPESEGDALMIEVQDKKKSVQGKAMISITS LTENPNDNVRWWPIYHGEQECVGKIQLFIGSTTTSDEDCHIKNAPVVETLAYDLLLEAATRAQK FHPQNLRLDGSWKWLLSEFADYYGVSDSYTKLRYLSHVMNVATPTKTCLQLVHELLVPILMARS EKSLTRQEKSILMDCEIEIEKLMATVFENYKSLDENFPSGLADISCPVQVSATTALSSAVQVFT LLHDILSPEAQETLKNYLQTAAKKRCRKHMVDTDEYVSCNSEGFLLDSVTISTAYLKMKNLFLI ISNEIEADIKITNEHVLPSSIDLANLAAVVYSTQLCHRLRAFLSAVPPSCPLPHVNELLIAVSD FERNLDSWGISPVHGGVDSRGLFHNYIMVWIHDMELRLLDRCRAEKGSVYWDLEDIRTPSAPPI MESGQEDSISLEIEKDIQKIEDEICGEAGVESSKQESMRSSSHLYRVEEFGESVKDSKTVEDSK ISEICSDELEECHSISGQYAWQSLLAYDACIRLCLYEWSKGSTEASEFLRDECRILRGAFGLHK FLLQPRGVRSSEKNNNVKAEPKPSLKSKNVVRKLRVEVKRLRLIPQRKLRGTDSLRSLMNMQIG MGAEYCRQVSSLVKTGMTSIKQATLSAVSEEQFSCYLQMKSTAEGGQIEQGSSVCLQSGTGSYH VFFPESEGDALMIEVQDKKKSVQGKAMISITSLTENPNDNVRWWPIYHGEQECVGKIQLFIGST TTSDEDCHIKNAPVVETLAYDLLLEAATRAQKFHPQNLRLDGSWKWLLSEFADYYGVSDSYTKL RYLSHVMNVATPTKTCLQLVHELLVPILMARSEKSLTRQEKSILMDCEIEIEKLMATVFENYKS LDENFPSGLADISCPVQVSATTALSSAVQVFTLLHDILSPEAQETLKNYLQTAAKKRCRKHMVD TDEYVSCNSEGFLLDSVTISTAYLKMKNLFLIISNEIEADIKITNEHVLPSSIDLANLAAVVYS TQLCHRLRAFLSAVPPSCPLPHVNELLIAVSDFERNLDSWGISPVHGGVDSRGLFHNYIMVWIH DMELRLLDRCRAEKGSVYWDLEDIRTPSAPPIMESGQEDSISLEIEKDIQKIEDEICGEAGVES SKQESMRSSSHLYRVEEFGESVKDSKTVEDSKISEICSDELEECHSISGQYAWQSLLAYDACIR LCLYEWSKGSTEASEFLRDECRILRGAFGLHKFLLQPRGVRSSEKNNNVKAEPKPSLKSKNVVR KLRVEVKRLRLIPQRKLRGTDSLRSLMNMQIGMGAEYCRQVSSLVKTGMTSIKQATLSAVSEEQ FSCYLQMKSTAEGGQIEQGSSVCLQSGTGSYHVFFPESEGDALMIEVQDKKKSVQGKAMISITS LTENPNDNVRWWPIYHGEQECVGKIQLFIGSTTTSDEDCHIKNAPVVETLAYDLLLEAATRAQK FHPQNLRLDGSWKWLLSEFADYYGVSDSYTKLRYLSHVMNVATPTKTCLQLVHELLVPILMARS EKSLTRQEKSILMDCEIEIEKLMATVFENYKSLDENFPSGLADISCPVQVSATTALSSAVQVFT LLHDILSPEAQETLKNYLQTAAKKRCRKHMVDTDEYVSCNSEGFLLDSVTISTAYLKMKNLFLI ISNEIEADIKITNEHVLPSSIDLANLAAVVYSTQLCHRLRAFLSAVPPSCPLPHVNELLIAVSD FERNLDSWGISPVHGGVDSRGLFHNYIMVWIHDMELRLLDRCRAEK(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017;Chen et al., 2017a

circRNA

Detail information of AT5G48310_circ_g.1

Address

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