Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | Zm00001d018724_circ_g.1 |
| ID in PlantcircBase | zma_circ_002433 |
| Alias | circ1546 |
| Organism | Zea mays |
| Position | chr7: 3129996-3134656 JBrowse» |
| Reference genome | AGPv4.38 |
| Type | ui-circRNA |
| Identification method | CIRCexplor2 |
| Parent gene | Zm00001d018724 |
| Parent gene annotation |
transducin family protein / WD-40 repeat family protein |
| Parent gene strand | - |
| Alternative splicing | Zm00001d018724_circ_g.2 Zm00001d018724_circ_g.3 |
| Support reads | 3 |
| Tissues | seedling leaves |
| Exon boundary | No-Yes |
| Splicing signals | CT-TA |
| Number of exons covered | Zm00001d018724_T012:11 Zm00001d018724_T010:11 Zm00001d018724_T001:11 Zm00001d018724_T008:11 Zm00001d018724_T011:11 Zm00001d018724_T005:11 Zm00001d018724_T003:11 Zm00001d018724_T007:8 Zm00001d018724_T009:11 Zm00001d018724_T002:11 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.003989961 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Chen et al., 2017b |