Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d018724_circ_g.1 |
ID in PlantcircBase | zma_circ_002433 |
Alias | circ1546 |
Organism | Zea mays |
Position | chr7: 3129996-3134656 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d018724 |
Parent gene annotation |
transducin family protein / WD-40 repeat family protein |
Parent gene strand | - |
Alternative splicing | Zm00001d018724_circ_g.2 Zm00001d018724_circ_g.3 |
Support reads | 3 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d018724_T012:11 Zm00001d018724_T010:11 Zm00001d018724_T001:11 Zm00001d018724_T008:11 Zm00001d018724_T011:11 Zm00001d018724_T005:11 Zm00001d018724_T003:11 Zm00001d018724_T007:8 Zm00001d018724_T009:11 Zm00001d018724_T002:11 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.003989961 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |