Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G13960_circ_g.2 |
ID in PlantcircBase | ath_circ_002453 |
Alias | Ath_circ_FC2605 |
Organism | Arabidpsis thaliana |
Position | chr1: 4778499-4778663 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | PcircRNA_finder, circRNA_finder |
Parent gene | AT1G13960 |
Parent gene annotation |
Probable WRKY transcription factor 4 |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 11 |
Tissues | whole_plant |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G13960.1:1 AT1G13960.2:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.525466871 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017;Chen et al., 2017a |