Plant Circular RNA Database

Detail information of Os01g0536000_circ_g.3

			
						 General Information
					
						CircRNA Name
						Os01g0536000_circ_g.3
					
						ID in PlantcircBase
						osa_circ_002063
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr1: 19471375-19476219  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os01g0536000						
					
						Parent gene annotation
						
							Similar to CBL-interacting serine/threonine-protein kinase 24 (E
C 2.7.1.37) (SNF1-related kinase 3.11) (SALT OVERLY SENSITIVE 2 
protein). (Os01t0536000-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os01g0536000_circ_g.2 Os01g0536000_circ_g.4 Os01g0536000_circ_g.5 						
					
						Support reads
						2
					
						Tissues
						shoot, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os01t0536000-01:8

General Information
CircRNA Name	Os01g0536000_circ_g.3
ID in PlantcircBase	osa_circ_002063
Alias	NA
Organism	Oryza sativa
Position	chr1: 19471375-19476219 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os01g0536000
Parent gene annotation	Similar to CBL-interacting serine/threonine-protein kinase 24 (E C 2.7.1.37) (SNF1-related kinase 3.11) (SALT OVERLY SENSITIVE 2 protein). (Os01t0536000-01)
Parent gene strand	-
Alternative splicing	Os01g0536000_circ_g.2 Os01g0536000_circ_g.4 Os01g0536000_circ_g.5
Support reads	2
Tissues	shoot, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os01t0536000-01:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CTCGATGGTAGACACCTTTGCTGTGACAAAAATCAACACCATCAATGAGCTGCTGAAAGTATCT
GCGTGCATCAGCTTCATTGAGTCTTCCATGACGAATcttataattgcgaatgtgtgtcttgtac
cccattgactgagcaacaacctccatgcttgacatgataacctttgctggtttgcgtgataaaa
atctattt

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTTATAATTGCGAATGTGTGTCTTGTACCCCATTGACTGAGCAACAACCTCCATGCTTGACATG
ATAACCTTTGCTGGTTTGCGTGATAAAAATCTATTTTGAAGCTTGTCATAGTCCTGTAGATCAA
GGCATCAAGCATTAGGTCCGAGGAGAAGAAACCCATAATTATCTATAAAACTCACACACAGGGT
AAACCATGGACATTTAAACAAGCTTCTAGGCAATACCAGTATTGCGGAGTACATACAAAAATAA
TAAAAATAGAGGATAGTTTGAATTGTGTCAAGTTGGGCAGCAACAATATTAAGGTGTGTTTGAG
AGAAGAGGAACAAAGATCATCAGATGGGATGGTCTATCATTGTCTTTTTCCTCTGGTTATATGT
TAAAATAATTTGAATCAAATGGATTTTCTTTAGTCTATGCATATAATACATGATTGCAAAAATA
ATGTAAACTGCCGCAGCAAATCACATGTACACTATTTAAACTAAACTGAATATTCACCGATAAT
AACAATAAGAACCATGATTTAATGCCCAAATAGCGTATTAATTAAAAAATGTAGAACTGGGACA
TGACATAATAACAGTGTTAGTCCTGTACTCCAACTTTTAGTTTGCGAAAACACTAGACATCACA
AAATGTCTTGCACCATACCTGTCGGCGATCAAATAGTGCTGCAAGGTTCAAGCCTTGAGATAGA
ATTATTAGGTCGAATGCATTGAGTGTCAAAGGTCCTGCTTCGTCATCTAAAGTATGGTCAGCGT
CTTCCTGAAATCACACAGAAAAAGGACCACAAATTATATATTTATATAATGACAGGTAAAAGGC
ACAATAGAGCTCCCGTAAAAACGTACAGCATAGCTTCAGTGCGAAACAGGCTTTCTGATCAAAT
TTCATAATTAACAATGGAGCAACTGAAATTCCAGTTTCAGTTACTGCTAATAGTTCTTATCTGG
AGCAACTGAAATTCCATTCCGAGGCTTTCATTTGGAGCATATTTTGAAGATTGTAGCACATACA
AAATGTCATATATATGCAATGATTCCTTTCCAAAAACAGTTCTAAGACAAGAGTAAGCATAAAT
ACCTCAGGATCATCAAAAGCTGCATTGACATCATCAAGATTGACTTCTTCACTTTCAATTTCTC
TGGTAGGTTCATAATTCTTCTTAAACCATTCATCATTCCTGATCTCTTCTATCCTGATTCTCTG
TTCCAAGTCAAAATTCATATTGAGTCAACAAAATGCCAATGAAAATCAGTATCTAGAGGTGTGA
TGTATCTAAACTATAATTCATTGAATTCATATCAGCCAATGGAGATTTTCTTTAGCTAAACACT
TCTATAACTTTACTTACTTTATCTGGATTAGGGTCAAGAATTCTGTGAATAAGTGACTTGGCAC
CATTAGGAAACCAAGCTGGGAATGAATATTCTGCACTCTCTATCTGTATTAAGCAAATAGACAG
ATATAAATTTGTATATTCTGTACAAAAGAAAAACAATTTTAGATAAAAACTTCTATTCCATCCA
TCAAGGCATATGTTGAACTAATATTCAAATCTAGAAAATAAAAATAGCTATATGCATCTCAACC
TGAAATATGCAAATAGATATATCTCTTAATCAGTCCTACTAGAATGGAATACAAATGTTTATAC
TTCCACCAACCAAAAAGAAAAGAGAAACAAGAGCGAAAAGGAGAGGATTTAGCTATGAAGCCAT
GTGTAATGAGTCTGCTATTGTTGTTGTGCTCCCCAGCTTCTCTGCTAATTCTCTTATTGAAAGT
AGTAGCATGTTAACTAGTTTATTCTAAAGGATGCCGAGGTTAATTTCCTTTTAGTTGGTTAGTT
GTTTCGGCAAGCTTACATTTCTTACTTGCCGGAATGTTTCAGCAGTAGGAAAGCAGGTATGAGA
TCACTATGCTCACGTATCAGAGCCACTGCCAGGATCTGTAATCTTTAACTACTAGCAACACACT
ACATTACATAAGCTACTTAGCTATCTATGCACTGAGAAGTACCGAGTATGTTTGATATTGTTTT
CACATGGATTTCACAAACTAATACCACTAATCATGCTTAAATGAGTGGCTAGATAATAAACGTA
AGCACATAGTGTATAGTAAAAGCAAATACAAGTAAATGTCATGAGATCTGATCTTCCATACAAA
GAGATCATGTGCCAATATGATATACACTGACACAAAATCATAAATGGGTTGCAATATACTTATT
TGAGCTTCAAAAAAGTTGCCATAGGTTAGAAGAAACAAACCTTCCCGTAAAGGGTAGTCAAATC
AACTTCATCAAATGGAAGATAACCTGCCAACAGGACATATAGAATAACTCCACATGACCATGTA
TCAGCAAGTGCTCCATCATATCCTTTATGACTGAGAACCTGATCCATACAAGGAGTTAAAGGTT
GCAGTGAACACATTATCTATAATCATATGAAACACATCACATGGTTTTACTGAGAATGAAAAGT
AAAGCATTTTTCCAAATAAAGAATCAAGAGATATCAATCATGCATATTTGGCTCATTCAGTATA
GAGATAAAAAACAGTTCTAGTTATATCACTTTTTATTTTTTACATTTTTTTAGAGAAGATGTCT
TAAGTTACACGGTGGAACAATGTTACTCAACCTGCCTGAAGGATAAATGTATGAGTATTCCATC
ACACATGTTTAACTGAGTAATCTGACATCTTAGGATGAAGGTATATTTAAAGGGTTAATTGGAT
CCATGCCACTGCAACTATACGAAATTGAAAAAATACCACTACTATTCATCATATTAGCTACATG
CCACTAGAAATTTTTAAAATTAGAACCATGCCACTCTCGTCCCTTTTTCCGTCTCCTCTCTCAC
ACCGTCTCGTTCCACCGTTTAATCGTTTCCATTTCCCTCTTCTTTCTCCGTGCGACTGCAAAGG
ACAGCGGCGACGCCGCCGGCAGCTCCCGAGCACTCCCGCCGCAGATGGCGTCGAGGACGGCAGC
AGCGGCTCCCGAGACCTCCCATCGTGGATCGAGTACAGCGGCGGCGGCAACGACGTGCCACTGA
GCTTCTTGACGATGCACCCCACGTGGCCCGCGGCGAGCCGCCGTCGGAGTCGAAGGCCAGGTCG
TAGGGCCGCGACGTGGCGGGCCCCATCGCCTCGATCTCCCGCCACCGCTGGATCAGCGACGACG
CGCGCAGCACCACGGGCGGGAGCTCTGCGCCGCCCCGCCGTCGACGACGCGTCCAACGGCGCCG
GGGACGGCTCCCGGAACACGGCGGCGCGAGCGGTCACAGCCTCACGGGTGGCCGACGCGAGCGC
GGACAGCTCGGCGTCCCTTGCCCTCCGCCTCCGCTCCAGCGGCGCGGGGCCTCTGCGGACGCCT
TGGCGGCGGCGGCCCCCGCCGCCGCCCACGGGTCCGTCAAGTCCTCGCCATCTCGTGCTACTTG
GTGGCGCAGTCCATCAAGAGACTCGAGACGAATGGCGGCGGCAAAGTGTCGGCGGTCGGGGACC
CCGACATGCGGCGCCACGGCCGCCGCATTGCCTCGGCCGTGAGGCCCTTGGCATGGGCAGCCCC
CGCGGCGCCAAGCCGCCGACTGCTTCGATCTTGCTTGGTCCATTCTTGTTAAATCCATACAGAT
GTTGCTGTCGCTGGATTGGATGAGTTCATTTGTCAAATTGACAGTGAGATACGTGAAATCTTTG
CAGAGAATGGCGTGGACGAGCACGGCAAGCCGACGCACAAGGTGGTGTACAGGGTGATGGACGC
CGACAACAACCTCCGTGCCGGCAACCCGTTCCCCGGCGCGACGGCTAACATCATGGACGTGGTG
GAGAGAAGTGGGGAATAAAGAGAAGAGGGGCGTCGACTTGGGCGGCGGCATCAGGTCGCGCCGC
GCCCGGCCCGCCACGCTCCTCCGCCATTGCCGCATCGTCCTTGCAAGGCTTGCCTTCGCCGTCG
CTGTCGCCATCGGCGCCTAGGCCAGCAGCCGCAGCCGTTGCCGCCGCCGCGACGGGCGCCTCGT
AGAAGAGGTCCGAGAAGATGTCCTTCTCCAGCGAGTCCGCGAACGGGAACCACAGGCCAGCCTC
GTCTTCGTGCACCGGCGCCGCCGACCCTTGCGCCGGTGAGGACGACGAAGGTGGTGGTGCTGTC
CCCGGCCACCTAGGAGCAGGAGGATGGGAAGGGAGGGGGGATAATGACGGGAATAGAGACGGCG
TGAGAGAGGAGGACGGAAAAACTGACTGGAGTGGCATGGTTCCAATTTTAGAAATTTCGAGTGG
CATGTAGCCGATATGATGAATAGTAGTGGCATTTTTTCAATTTGGCAAAGTTGCAGTGGCATGG
ATCCAATTAACCCATATTTAAACCACCCTTTGTTGCAGAAGACAATTTTAATGTTTTCTATCTA
GGAAAACTCAAAGCAAAGCATGTGATTCAGATGTCACTCACCTCTGGGGCAACATAATTTGGGG
TTCCACAGGTAGTACGTAAAAGGGCACCACCCTGCACAAGAACAAACTAAATAACTCGACAAAA
GGATATGAATATTGGACAAGCCTTCAGAAAGGTATGGACCTGAGCAGGCCAGGCGCTGAGTCCA
AAGTCTGATATTTTAAGATTTCCTTGGGAATCAAGGAGGAGATTTTCGGGCTGCATACATACAA
AATAAAATCAAAAAGCCCACAAACTAAACACAAAAAGTTTTCGTATTTTTCTTTTGACTTATCA
CCTTTAAATCTCGATGGTAGACACCTTTGCTGTGACAAAAATCAACACCATCAATGAGCTGCTG
AAAGTATCTGCGTGCATCAGCTTCATTGAGTCTTCCATGACGAAT
						
					

			
		

Sequences
Splice junction sequence	CTCGATGGTAGACACCTTTGCTGTGACAAAAATCAACACCATCAATGAGCTGCTGAAAGTATCT GCGTGCATCAGCTTCATTGAGTCTTCCATGACGAATcttataattgcgaatgtgtgtcttgtac cccattgactgagcaacaacctccatgcttgacatgataacctttgctggtttgcgtgataaaa atctattt
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTTATAATTGCGAATGTGTGTCTTGTACCCCATTGACTGAGCAACAACCTCCATGCTTGACATG ATAACCTTTGCTGGTTTGCGTGATAAAAATCTATTTTGAAGCTTGTCATAGTCCTGTAGATCAA GGCATCAAGCATTAGGTCCGAGGAGAAGAAACCCATAATTATCTATAAAACTCACACACAGGGT AAACCATGGACATTTAAACAAGCTTCTAGGCAATACCAGTATTGCGGAGTACATACAAAAATAA TAAAAATAGAGGATAGTTTGAATTGTGTCAAGTTGGGCAGCAACAATATTAAGGTGTGTTTGAG AGAAGAGGAACAAAGATCATCAGATGGGATGGTCTATCATTGTCTTTTTCCTCTGGTTATATGT TAAAATAATTTGAATCAAATGGATTTTCTTTAGTCTATGCATATAATACATGATTGCAAAAATA ATGTAAACTGCCGCAGCAAATCACATGTACACTATTTAAACTAAACTGAATATTCACCGATAAT AACAATAAGAACCATGATTTAATGCCCAAATAGCGTATTAATTAAAAAATGTAGAACTGGGACA TGACATAATAACAGTGTTAGTCCTGTACTCCAACTTTTAGTTTGCGAAAACACTAGACATCACA AAATGTCTTGCACCATACCTGTCGGCGATCAAATAGTGCTGCAAGGTTCAAGCCTTGAGATAGA ATTATTAGGTCGAATGCATTGAGTGTCAAAGGTCCTGCTTCGTCATCTAAAGTATGGTCAGCGT CTTCCTGAAATCACACAGAAAAAGGACCACAAATTATATATTTATATAATGACAGGTAAAAGGC ACAATAGAGCTCCCGTAAAAACGTACAGCATAGCTTCAGTGCGAAACAGGCTTTCTGATCAAAT TTCATAATTAACAATGGAGCAACTGAAATTCCAGTTTCAGTTACTGCTAATAGTTCTTATCTGG AGCAACTGAAATTCCATTCCGAGGCTTTCATTTGGAGCATATTTTGAAGATTGTAGCACATACA AAATGTCATATATATGCAATGATTCCTTTCCAAAAACAGTTCTAAGACAAGAGTAAGCATAAAT ACCTCAGGATCATCAAAAGCTGCATTGACATCATCAAGATTGACTTCTTCACTTTCAATTTCTC TGGTAGGTTCATAATTCTTCTTAAACCATTCATCATTCCTGATCTCTTCTATCCTGATTCTCTG TTCCAAGTCAAAATTCATATTGAGTCAACAAAATGCCAATGAAAATCAGTATCTAGAGGTGTGA TGTATCTAAACTATAATTCATTGAATTCATATCAGCCAATGGAGATTTTCTTTAGCTAAACACT TCTATAACTTTACTTACTTTATCTGGATTAGGGTCAAGAATTCTGTGAATAAGTGACTTGGCAC CATTAGGAAACCAAGCTGGGAATGAATATTCTGCACTCTCTATCTGTATTAAGCAAATAGACAG ATATAAATTTGTATATTCTGTACAAAAGAAAAACAATTTTAGATAAAAACTTCTATTCCATCCA TCAAGGCATATGTTGAACTAATATTCAAATCTAGAAAATAAAAATAGCTATATGCATCTCAACC TGAAATATGCAAATAGATATATCTCTTAATCAGTCCTACTAGAATGGAATACAAATGTTTATAC TTCCACCAACCAAAAAGAAAAGAGAAACAAGAGCGAAAAGGAGAGGATTTAGCTATGAAGCCAT GTGTAATGAGTCTGCTATTGTTGTTGTGCTCCCCAGCTTCTCTGCTAATTCTCTTATTGAAAGT AGTAGCATGTTAACTAGTTTATTCTAAAGGATGCCGAGGTTAATTTCCTTTTAGTTGGTTAGTT GTTTCGGCAAGCTTACATTTCTTACTTGCCGGAATGTTTCAGCAGTAGGAAAGCAGGTATGAGA TCACTATGCTCACGTATCAGAGCCACTGCCAGGATCTGTAATCTTTAACTACTAGCAACACACT ACATTACATAAGCTACTTAGCTATCTATGCACTGAGAAGTACCGAGTATGTTTGATATTGTTTT CACATGGATTTCACAAACTAATACCACTAATCATGCTTAAATGAGTGGCTAGATAATAAACGTA AGCACATAGTGTATAGTAAAAGCAAATACAAGTAAATGTCATGAGATCTGATCTTCCATACAAA GAGATCATGTGCCAATATGATATACACTGACACAAAATCATAAATGGGTTGCAATATACTTATT TGAGCTTCAAAAAAGTTGCCATAGGTTAGAAGAAACAAACCTTCCCGTAAAGGGTAGTCAAATC AACTTCATCAAATGGAAGATAACCTGCCAACAGGACATATAGAATAACTCCACATGACCATGTA TCAGCAAGTGCTCCATCATATCCTTTATGACTGAGAACCTGATCCATACAAGGAGTTAAAGGTT GCAGTGAACACATTATCTATAATCATATGAAACACATCACATGGTTTTACTGAGAATGAAAAGT AAAGCATTTTTCCAAATAAAGAATCAAGAGATATCAATCATGCATATTTGGCTCATTCAGTATA GAGATAAAAAACAGTTCTAGTTATATCACTTTTTATTTTTTACATTTTTTTAGAGAAGATGTCT TAAGTTACACGGTGGAACAATGTTACTCAACCTGCCTGAAGGATAAATGTATGAGTATTCCATC ACACATGTTTAACTGAGTAATCTGACATCTTAGGATGAAGGTATATTTAAAGGGTTAATTGGAT CCATGCCACTGCAACTATACGAAATTGAAAAAATACCACTACTATTCATCATATTAGCTACATG CCACTAGAAATTTTTAAAATTAGAACCATGCCACTCTCGTCCCTTTTTCCGTCTCCTCTCTCAC ACCGTCTCGTTCCACCGTTTAATCGTTTCCATTTCCCTCTTCTTTCTCCGTGCGACTGCAAAGG ACAGCGGCGACGCCGCCGGCAGCTCCCGAGCACTCCCGCCGCAGATGGCGTCGAGGACGGCAGC AGCGGCTCCCGAGACCTCCCATCGTGGATCGAGTACAGCGGCGGCGGCAACGACGTGCCACTGA GCTTCTTGACGATGCACCCCACGTGGCCCGCGGCGAGCCGCCGTCGGAGTCGAAGGCCAGGTCG TAGGGCCGCGACGTGGCGGGCCCCATCGCCTCGATCTCCCGCCACCGCTGGATCAGCGACGACG CGCGCAGCACCACGGGCGGGAGCTCTGCGCCGCCCCGCCGTCGACGACGCGTCCAACGGCGCCG GGGACGGCTCCCGGAACACGGCGGCGCGAGCGGTCACAGCCTCACGGGTGGCCGACGCGAGCGC GGACAGCTCGGCGTCCCTTGCCCTCCGCCTCCGCTCCAGCGGCGCGGGGCCTCTGCGGACGCCT TGGCGGCGGCGGCCCCCGCCGCCGCCCACGGGTCCGTCAAGTCCTCGCCATCTCGTGCTACTTG GTGGCGCAGTCCATCAAGAGACTCGAGACGAATGGCGGCGGCAAAGTGTCGGCGGTCGGGGACC CCGACATGCGGCGCCACGGCCGCCGCATTGCCTCGGCCGTGAGGCCCTTGGCATGGGCAGCCCC CGCGGCGCCAAGCCGCCGACTGCTTCGATCTTGCTTGGTCCATTCTTGTTAAATCCATACAGAT GTTGCTGTCGCTGGATTGGATGAGTTCATTTGTCAAATTGACAGTGAGATACGTGAAATCTTTG CAGAGAATGGCGTGGACGAGCACGGCAAGCCGACGCACAAGGTGGTGTACAGGGTGATGGACGC CGACAACAACCTCCGTGCCGGCAACCCGTTCCCCGGCGCGACGGCTAACATCATGGACGTGGTG GAGAGAAGTGGGGAATAAAGAGAAGAGGGGCGTCGACTTGGGCGGCGGCATCAGGTCGCGCCGC GCCCGGCCCGCCACGCTCCTCCGCCATTGCCGCATCGTCCTTGCAAGGCTTGCCTTCGCCGTCG CTGTCGCCATCGGCGCCTAGGCCAGCAGCCGCAGCCGTTGCCGCCGCCGCGACGGGCGCCTCGT AGAAGAGGTCCGAGAAGATGTCCTTCTCCAGCGAGTCCGCGAACGGGAACCACAGGCCAGCCTC GTCTTCGTGCACCGGCGCCGCCGACCCTTGCGCCGGTGAGGACGACGAAGGTGGTGGTGCTGTC CCCGGCCACCTAGGAGCAGGAGGATGGGAAGGGAGGGGGGATAATGACGGGAATAGAGACGGCG TGAGAGAGGAGGACGGAAAAACTGACTGGAGTGGCATGGTTCCAATTTTAGAAATTTCGAGTGG CATGTAGCCGATATGATGAATAGTAGTGGCATTTTTTCAATTTGGCAAAGTTGCAGTGGCATGG ATCCAATTAACCCATATTTAAACCACCCTTTGTTGCAGAAGACAATTTTAATGTTTTCTATCTA GGAAAACTCAAAGCAAAGCATGTGATTCAGATGTCACTCACCTCTGGGGCAACATAATTTGGGG TTCCACAGGTAGTACGTAAAAGGGCACCACCCTGCACAAGAACAAACTAAATAACTCGACAAAA GGATATGAATATTGGACAAGCCTTCAGAAAGGTATGGACCTGAGCAGGCCAGGCGCTGAGTCCA AAGTCTGATATTTTAAGATTTCCTTGGGAATCAAGGAGGAGATTTTCGGGCTGCATACATACAA AATAAAATCAAAAAGCCCACAAACTAAACACAAAAAGTTTTCGTATTTTTCTTTTGACTTATCA CCTTTAAATCTCGATGGTAGACACCTTTGCTGTGACAAAAATCAACACCATCAATGAGCTGCTG AAAGTATCTGCGTGCATCAGCTTCATTGAGTCTTCCATGACGAAT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.104257332

Conservation Information
Conserved circRNAs	NA
PMCS	0.104257332

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							19476125-19471407(+)
19471439-19471377(-)
19471489-19476116(-)
						
						Potential amino acid sequence
						
							MVDTFAVTKINTINELLKVSACISFIESSMTNLIIANVCLVPH*(+)
MSSMEVVAQSMGYKTHIRNYKIRHGRLNEADARRYFQQLIDGVDFCHSKGVYHRDLKPENLLLD
SQGNLKISDFGLSAWPAQGGALLRTTCGTPNYVAPEVLSHKGYDGALADTWSCGVILYVLLAGY
LPFDEVDLTTLYGKIESAEYSFPAWFPNGAKSLIHRILDPNPDKRIRIEEIRNDEWFKKNYEPT
REIESEEVNLDDVNAAFDDPEEDADHTLDDEAGPLTLNAFDLIILSQGLNLAALFDRRQDYDKL
QNRFLSRKPAKVIMSSMEVVAQSMGYKTHIRNYKIRHGRLNEADARRYFQQLIDGVDFCHSKGV
YHRDLKPENLLLDSQGNLKISDFGLSAWPAQGGALLRTTCGTPNYVAPEVLSHKGYDGALADTW
SCGVILYVLLAGYLPFDEVDLTTLYGKIESAEYSFPAWFPNGAKSLIHRILDPNPDKRIRIEEI
RNDEWFKKNYEPTREIESEEVNLDDVNAAFDDPEEDADHTLDDEAGPLTLNAFDLIILSQGLNL
AALFDRRQDYDKLQNRFLSRKPAKVIMSSMEVVAQSMGYKTHIRNYKIRHGRLNEADARRYFQQ
LIDGVDFCHSKGVYHRDLKPENLLLDSQGNLKISDFGLSAWPAQGGALLRTTCGTPNYVAPEVL
SHKGYDGALADTWSCGVILYVLLAGYLPFDEVDLTTLYGKIESAEYSFPAWFPNGAKSLIHRIL
DPNPDKRIRIEEIRNDEWFKKNYEPTREIESEEVNLDDVNAAFDDPEEDADHTLDDEAGPLTLN
AFDLIILSQGLNLAALFDRRQDYDKLQNRFLSRKPAKVIMSSMEVVAQSMGYKTHIRNYK(-)
MTSFKIDFYHANQQRLSCQAWRLLLSQWGTRHTFAIIRFVMEDSMKLMHADTFSSSLMVLIFVT
AKVSTIEI*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	19476125-19471407(+) 19471439-19471377(-) 19471489-19476116(-)
Potential amino acid sequence	MVDTFAVTKINTINELLKVSACISFIESSMTNLIIANVCLVPH(+) MSSMEVVAQSMGYKTHIRNYKIRHGRLNEADARRYFQQLIDGVDFCHSKGVYHRDLKPENLLLD SQGNLKISDFGLSAWPAQGGALLRTTCGTPNYVAPEVLSHKGYDGALADTWSCGVILYVLLAGY LPFDEVDLTTLYGKIESAEYSFPAWFPNGAKSLIHRILDPNPDKRIRIEEIRNDEWFKKNYEPT REIESEEVNLDDVNAAFDDPEEDADHTLDDEAGPLTLNAFDLIILSQGLNLAALFDRRQDYDKL QNRFLSRKPAKVIMSSMEVVAQSMGYKTHIRNYKIRHGRLNEADARRYFQQLIDGVDFCHSKGV YHRDLKPENLLLDSQGNLKISDFGLSAWPAQGGALLRTTCGTPNYVAPEVLSHKGYDGALADTW SCGVILYVLLAGYLPFDEVDLTTLYGKIESAEYSFPAWFPNGAKSLIHRILDPNPDKRIRIEEI RNDEWFKKNYEPTREIESEEVNLDDVNAAFDDPEEDADHTLDDEAGPLTLNAFDLIILSQGLNL AALFDRRQDYDKLQNRFLSRKPAKVIMSSMEVVAQSMGYKTHIRNYKIRHGRLNEADARRYFQQ LIDGVDFCHSKGVYHRDLKPENLLLDSQGNLKISDFGLSAWPAQGGALLRTTCGTPNYVAPEVL SHKGYDGALADTWSCGVILYVLLAGYLPFDEVDLTTLYGKIESAEYSFPAWFPNGAKSLIHRIL DPNPDKRIRIEEIRNDEWFKKNYEPTREIESEEVNLDDVNAAFDDPEEDADHTLDDEAGPLTLN AFDLIILSQGLNLAALFDRRQDYDKLQNRFLSRKPAKVIMSSMEVVAQSMGYKTHIRNYK(-) MTSFKIDFYHANQQRLSCQAWRLLLSQWGTRHTFAIIRFVMEDSMKLMHADTFSSSLMVLIFVT AKVSTIEI(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os01g0536000_circ_g.3

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