Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d032739_circ_g.2 |
ID in PlantcircBase | zma_circ_003634 |
Alias | Rctrl_test_circ_002328 |
Organism | Zea mays |
Position | chr1: 236936922-236937033 JBrowse» |
Reference genome | AGPv4.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d032739 |
Parent gene annotation |
Heterogeneous nuclear ribonucleoprotein 1 |
Parent gene strand | - |
Alternative splicing | Zm00001d032739_circ_g.1 |
Support reads | NA |
Tissues | root |
Exon boundary | No-No |
Splicing signals | CT-CA |
Number of exons covered | Zm00001d032739_T008:1 Zm00001d032739_T006:1 Zm00001d032739_T007:1 Zm00001d032739_T009:1 Zm00001d032739_T002:1 Zm00001d032739_T010:1 Zm00001d032739_T001:1 Zm00001d032739_T005:1 Zm00001d032739_T004:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.454643601 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |