Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d031232_circ_g.1 |
ID in PlantcircBase | zma_circ_000730 |
Alias | circ2595 |
Organism | Zea mays |
Position | chr1: 182929032-182933223 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d031232 |
Parent gene annotation |
Sodium/hydrogen exchanger 7 |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | 3 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d031232_T081:5 Zm00001d031232_T009:5 Zm00001d031232_T092:5 Zm00001d031232_T041:5 Zm00001d031232_T085:5 Zm00001d031232_T053:5 Zm00001d031232_T003:5 Zm00001d031232_T029:5 Zm00001d031232_T022:5 Zm00001d031232_T057:5 Zm00001d031232_T065:5 Zm00001d031232_T032:5 Zm00001d031232_T077:5 Zm00001d031232_T002:5 Zm00001d031232_T054:5 Zm00001d031232_T005:5 Zm00001d031232_T084:5 Zm00001d031232_T078:5 Zm00001d031232_T025:5 Zm00001d031232_T068:5 Zm00001d031232_T086:5 Zm00001d031232_T051:5 Zm00001d031232_T095:5 Zm00001d031232_T037:5 Zm00001d031232_T088:5 Zm00001d031232_T074:5 Zm00001d031232_T024:5 Zm00001d031232_T036:5 Zm00001d031232_T067:5 Zm00001d031232_T021:5 Zm00001d031232_T056:5 Zm00001d031232_T019:5 Zm00001d031232_T093:5 Zm00001d031232_T061:5 Zm00001d031232_T075:5 Zm00001d031232_T016:5 Zm00001d031232_T048:5 Zm00001d031232_T049:5 Zm00001d031232_T097:5 Zm00001d031232_T015:5 Zm00001d031232_T070:5 Zm00001d031232_T055:5 Zm00001d031232_T082:5 Zm00001d031232_T062:5 Zm00001d031232_T004:5 Zm00001d031232_T027:5 Zm00001d031232_T069:5 Zm00001d031232_T020:5 Zm00001d031232_T040:5 Zm00001d031232_T013:5 Zm00001d031232_T045:5 Zm00001d031232_T058:5 Zm00001d031232_T030:5 Zm00001d031232_T011:5 Zm00001d031232_T090:5 Zm00001d031232_T007:5 Zm00001d031232_T047:5 Zm00001d031232_T043:5 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.019701986 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |