Plant Circular RNA Database

Detail information of Zm00001d034371_circ_g.1

			
						 General Information
					
						CircRNA Name
						Zm00001d034371_circ_g.1
					
						ID in PlantcircBase
						zma_circ_006956
					
						Alias
						Zm01circ00184
					
						Organism
						
							Zea mays						
					
						Position
						
							chr1: 291098196-291102863  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Zm00001d034371						
					
						Parent gene annotation
						
							Nuclear pore complex protein NUP1
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d034371_circ_g.2 Zm00001d034371_circ_g.3 Zm00001d034371_circ_g.4 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d034371_T002:5
Zm00001d034371_T001:5

General Information
CircRNA Name	Zm00001d034371_circ_g.1
ID in PlantcircBase	zma_circ_006956
Alias	Zm01circ00184
Organism	Zea mays
Position	chr1: 291098196-291102863 JBrowse»
Reference genome	AGPv4.38
Type	ue-circRNA
Identification method	CIRI2
Parent gene	Zm00001d034371
Parent gene annotation	Nuclear pore complex protein NUP1
Parent gene strand	+
Alternative splicing	Zm00001d034371_circ_g.2 Zm00001d034371_circ_g.3 Zm00001d034371_circ_g.4
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d034371_T002:5 Zm00001d034371_T001:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AACAGACTGGTGCTTCAAATTTCATTTTCGGCATCAAGCAGCCAATTACGTCAGATTTTGAAAC
ATCAACTGCAAAAAACAAATCAACACTCGGGCAGAGggttgagtttgatcgtcttacagactta
ttgcgtgcaagaaccattgagtctgatccacctaaaccaattgtttctcgtgaggaaaagaatg
aagaaagt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1656
Transcript exons: 291098196-291098364,291099845-291100129,291100945-291101
022,291101653-291102309,291102397-291102863
GGTTGAGTTTGATCGTCTTACAGACTTATTGCGTGCAAGAACCATTGAGTCTGATCCACCTAAA
CCAATTGTTTCTCGTGAGGAAAAGAATGAAGAAAGTATCAAAGTTGATGGAATTAGAGGCTCAG
CGTTACGTCATATGGACCTAGATGATTCTCCTGCTGTTAAAGTACATAATCATGGTGCTAGTTC
TCCTGCAGAACTCGCGAAACAATATATGAGCTCTCGTTATTTGAGGGAACCCCAATCCAGTAGT
CTGCGGAGCCGATTGTTTCTTGAGAATAAAGGTGAAGCAAGCAACACTGTCAATGATAGGAGGT
CTGTACCACCAATTGTTCAGACACCACTTGAACTTCGGAATGAAAACCCTGGTCTCCCTGTAAA
TGGCTATGTGACTTCGGGATTACGTGGGCGTTCAGCGATATATAGAATGTCTCGCTCTCCATAT
TTTAAGGGTCAGAACTATTCCAGTGATTTGAACACGTCTTCATTGTCCCAACGATCACAAAGCT
TGCATGTTGGTGGCAGGCAGGTCTTGAAACGAAGCGGGGCTGAATTAGAGAATGAACTTGGATC
TATAGGCCCCATTCGTAGAATTCGGCAGAAATCAAATATGATGTCTTCATTTAGAGATTCTCGT
GCAAATCCTAAAGGAAACCTTCTTACTAGCCATATAAGTAGTACTGATTTCACTGAAGACGGTG
CATCCATTCAGTCTCCGAGCTCAAAAAAATTATTGGTTGGGAGTAGTCAATCTCTGCGACCCTT
AGAATCCCAAAAGAATGAGGGAGATGGTAAATCTAGTGATAGCATTCCACCCATACCAGCTCAA
TCAAACAAGATGGCTGAAAAGATATTTGAGCAGCTTAATATAATAGCTCCATCGCCAAAACAAC
AACAGTCTGTTACTCTGAATGCTAGTAACTCTATGTCAAAGAAACCTGTTTTTCAAGATGCTGG
GTCAAGCAGTATGTATAACCAATCTAGTTCCCTGAAGTTTCAAGATTTGGATGGTGCAAATGGA
CCCCATGATACAAACTTGAATGGTTCCCTGCTGAAGAAAGACAAGCTAAATATAATAAAAGACG
GATCGCCAAAAGCTGCCTTTTCTGATAGACCTGCCCTTTTGGGGAACTCGGTTTCTGCTTCTAA
ATCATGGACGCCAGCCTTTAAAATGGCTGTGATAGAGGACTTACCAGAGTTGGATGATGATCTG
GAGGTCCTTATTCAATCAAGTAAGATAGAGGTTGAAACAACTGAGCAGAAAATTGATTCAAATA
GAAAAGAACAGAAGGTTGAACAAAATATATTAGAGCAAAGGGTTGAACCGAACTTGAAGAACAT
TGCTGGTTCTACGATTAGTGAACAGCCTGTAGCATCACTGTCTAAAACTGTCACTTCATCTGGT
GGTTTATTTTTATCAAATGATCCTGGGAAGGCAGTTCCCAAAGCTTCTGTGGACAATAATACCG
AATTTGCATTCTCAAATGGGCCTCCTGGCACCCGCCCTGCAACTGGTGTATCAGCAATGCCACT
TGCTTCAGTTAATAACGATAAACAGACTGGTGCTTCAAATTTCATTTTCGGCATCAAGCAGCCA
ATTACGTCAGATTTTGAAACATCAACTGCAAAAAACAAATCAACACTCGGGCAGAG
						
					

						Genomic sequence
						
							GGTTGAGTTTGATCGTCTTACAGACTTATTGCGTGCAAGAACCATTGAGTCTGATCCACCTAAA
CCAATTGTTTCTCGTGAGGAAAAGAATGAAGAAAGTATCAAAGTTGATGGAATTAGAGGCTCAG
CGTTACGTCATATGGACCTAGATGATTCTCCTGCTGTTAAAGTAAGGATTCAGCTTACAAGCAT
TTTATGTTATTCATGAATATGGAATAACAGAACATTCTGTTATCCAATGCCTGAATACCATGAA
ATTTCATGCTGTTAGTAGAGCCAAGAGGAAGGCTTGTACAATTACAATTCCTTTTGTAGTATCT
CTATGGTCATGTGGTATTACTGTGTTTTACCTTCTTCAAATTATGGCTGTTTTTTCTTAATGTT
TTAATTTGATATCATTTCCTCGGAGTTCTGTGTGTATCACCAAGGCGGTAATGGGAGGTGAAGG
CATGAGACGAGGTTATGTCAGGAACAGTGGAATGCAGCAGAGAAAGTAGCAAAGAAAATGGGAA
AAAATAAATAAAGGGGAGGTGGGTGGGGGGCAAACCCAGCACACCGTCAAGTCTGTACCCTCTC
TCTCCGTGACTTTCTGAATCCTGAGCTTCTGATTGCTCGATGTCCAAAATGTACTGCTTGCTGC
AGTGCTGCTGCTCCCTCTCTGCTGGTTACACACCCTATCTGTGGCCCTCTTCTGCGACCACCCT
TCCTGAAGGGGTGTGCTGCACTGGCCATCAACACCAAGCTTGGTGGGGGTGGAGGAGATGGTGG
CTGCTTGGCCCCGTCCACTTGCCCACCTCTTCATATTTTGTTCTTCTCTTCTCACTTTTTCTGG
TAAAGTGTCCATTATGCCTAGCATTGCTGATGCGCCTTGTCTATATTGTGTATCACTTAGATCC
CTTAGAGCTGCAAATTTATGTTACCAAAAACTTGGCTCTATTTAAGGTTAATTTTGGTTATTTG
TACGATAAATCAGAATAGGGGAACAATACTGAGATGTTCCCCATATAATTTGAAGACTTTATTT
AAATTAAAGACCGTCAATTCTACATTTATGATTTATTTCAGATAAAAAACACATGACAAACAAC
AGCTTATGGTTGAAATAAATTCCCATGCCATCTCTAGTTACTATTTTTTTGTTCCCTATTGACT
CCTAGTTAGTTTGGGGCCCTTGGTGTCCTAAATACAAGTGTTCAAAAGGCGTTGTTCCATGCTC
GCCTAGGTGCGCCTCTGCGCTGGGCGGAGGGGTACCACCTTTCTTGGGGGGTGGGGGGTGGGGT
GGAGGAAGGGACGTCAGGCGGAGGTCGGCCGGTGGGGAGGAGCAGCCTCAGTCGGAGATTATTA
GCTTCAGAGCCTGTTGTTACTGCACTAAAAATATGTTGTCAATAAAGCTGGTGAGATTGTTGGA
TTCGTGTTTTTTCCTGTACTAATGTAAAATCATTAGTTTGATTGGGTGAATGTAGCTCGTAAGC
ATAATGACTTGTCTTGGTATGACTTTTTAGTACTATATATACACTTGCTAACTTGCAGCATCAA
CTGTTTAGTGAGCTAGGAAGAAGCTAACAAATGTAGCTTTGCTTTGAGGCATTGTTGTCTGAAA
CTTTTGTTACCTTTTATATTTAATTACTATCTAATTTGCACTCTTGTAGGTACATAATCATGGT
GCTAGTTCTCCTGCAGAACTCGCGAAACAATATATGAGCTCTCGTTATTTGAGGGAACCCCAAT
CCAGTAGTCTGCGGAGCCGATTGTTTCTTGAGAATAAAGGTGAAGCAAGCAACACTGTCAATGA
TAGGAGGTCTGTACCACCAATTGTTCAGACACCACTTGAACTTCGGAATGAAAACCCTGGTCTC
CCTGTAAATGGCTATGTGACTTCGGGATTACGTGGGCGTTCAGCGATATATAGAATGTCTCGCT
CTCCATATTTTAAGGTTGGTATATATCTAGTGCACATTATGTCAGGTTCTTGCAGTTGGTAGTT
TTCTGATAAGTGTAGTTTTGCATTGTAAGAGCATCTCCAAGAGGGACCCGAAAAAAAAACTTGA
CCTGCGGGGGGTAAGACAGCCCCCGGGTATTGTATTAAGAGGGGCCCGAAACAAGGTTGTATTT
TAAAATATGGGGCTCAGGGCCATAAAATGCCCTCCAACAGTGGCCCTATTTGATAAAAATTCAT
CAAACGATTATAGACCTCAGTCTCTCGGGTCCTAAATATAGTACCCCATATATTTGGGCCCTAT
CATCGTTTCCTCCTAATCTAATACTATTTGTTTTGTAATAACGTGATTTATTTGATTATTTCCT
AAATAGCATTATTTAAGGCCTAATTGTTGGAGCAACAAAATTTCTTTTAAGGCCCTAAATACCT
TAATTCGGTCCTATTTTAATTTTTAGGGCTTTATTTTAAAGCTCTTTGTTGGAGATGCTCTAAT
GGCCTCAAAAACATGACAAATGTAAATGCTAATATAAAATTGCAGCAGCATCTAAGTTTACTTG
TATCACCTTTCCTTATGTACTTAACAAATTGTTGATGGCCAGTGCTGGTCAGATTTAAAATAGT
TTGACTTAATGAGTTCTAGGATATCATTTTTTTTCTTTACCAGAGGTACAAACACATTTTTATT
TGTATGTGCTCCACACAAAATGCTCTTGGTTCTACAGCACTAGAATTTTTCTGCTTGTTCATTT
AATGTGATGAGAAGACCTTCCAAAGTTATTCGAAGTAATTTTTTGTTTATGCATCTCGTAGGGT
CAGAACTATTCCAGTGATTTGAACACGTCTTCATTGTCCCAACGATCACAAAGCTTGCATGTTG
GTGGCAGGCAGGTAATTTATTAAACATTTTGAGTATAGCGTTATGTACTGAAGTGTACATTTTT
TTCTTGCTTTGTATTCACATATTAGAAATTGATATGGATGTTACAGAATTACGGTTGTGAACGT
GTAAAATATATGTTTTCTTCTGATGTCCTTGATGTTTCACATGCAAGTATCTATATGATAAAAA
ACATATCATTTTGTTTTATTGATGCTTGTATGATATCATGGAATCTAGACTTGTTGGCTATGTT
GAAGTGTATATAAGTGGATTGCTTACCTTCACCTAATAGCTTAAGCTTTTGGGTTGAACTGGTT
AGTGCGTCCACTCAAATGGTATCAAAGCCATAGGTATTGAGTTTGAATCCTAGAAGAGGCTTTT
GTGCCTTCACCCCCCTTATTTCCACGTTTGCGCATTTCTCTCTGGCTGCACGTGAATTGGGGGG
GGGGGGGGTTGAAGTGTATAAGTGGATTGCCTACCTTCTCCAAATAGCTTAAGCCTTTTGGGTT
GAACTGGTTAGTGCGTCCACTCTAAAAGGCTACATCTTTGAGGAATTTTCTTTGTGGTGTATGT
AGCTTCTGTGTAGTCTGAACTTTATGCACCAGAGTTTTCTCACTATACTGCCATCTTCATAACA
GGTCTTGAAACGAAGCGGGGCTGAATTAGAGAATGAACTTGGATCTATAGGCCCCATTCGTAGA
ATTCGGCAGAAATCAAATATGATGTCTTCATTTAGAGATTCTCGTGCAAATCCTAAAGGAAACC
TTCTTACTAGCCATATAAGTAGTACTGATTTCACTGAAGACGGTGCATCCATTCAGTCTCCGAG
CTCAAAAAAATTATTGGTTGGGAGTAGTCAATCTCTGCGACCCTTAGAATCCCAAAAGAATGAG
GGAGATGGTAAATCTAGTGATAGCATTCCACCCATACCAGCTCAATCAAACAAGATGGCTGAAA
AGATATTTGAGCAGCTTAATATAATAGCTCCATCGCCAAAACAACAACAGTCTGTTACTCTGAA
TGCTAGTAACTCTATGTCAAAGAAACCTGTTTTTCAAGATGCTGGGTCAAGCAGTATGTATAAC
CAATCTAGTTCCCTGAAGTTTCAAGATTTGGATGGTGCAAATGGACCCCATGATACAAACTTGA
ATGGTTCCCTGCTGAAGAAAGACAAGCTAAATATAATAAAAGACGGATCGCCAAAAGCTGCCTT
TTCTGATAGACCTGCCCTTTTGGGGAACTCGGTTTCTGCTTCTAAATCATGGACGCCAGCCTTT
AAAATGGCTGTGATAGAGGTATGAGAAATGTGTTGTTTTTATCGAATGTAGTGCAGTCATATAT
CCAATACTTGTGACCTGATTAGTTTTTCTTATGTTTTCAAGGACTTACCAGAGTTGGATGATGA
TCTGGAGGTCCTTATTCAATCAAGTAAGATAGAGGTTGAAACAACTGAGCAGAAAATTGATTCA
AATAGAAAAGAACAGAAGGTTGAACAAAATATATTAGAGCAAAGGGTTGAACCGAACTTGAAGA
ACATTGCTGGTTCTACGATTAGTGAACAGCCTGTAGCATCACTGTCTAAAACTGTCACTTCATC
TGGTGGTTTATTTTTATCAAATGATCCTGGGAAGGCAGTTCCCAAAGCTTCTGTGGACAATAAT
ACCGAATTTGCATTCTCAAATGGGCCTCCTGGCACCCGCCCTGCAACTGGTGTATCAGCAATGC
CACTTGCTTCAGTTAATAACGATAAACAGACTGGTGCTTCAAATTTCATTTTCGGCATCAAGCA
GCCAATTACGTCAGATTTTGAAACATCAACTGCAAAAAACAAATCAACACTCGGGCAGAG
						
					

			
		

Sequences
Splice junction sequence	AACAGACTGGTGCTTCAAATTTCATTTTCGGCATCAAGCAGCCAATTACGTCAGATTTTGAAAC ATCAACTGCAAAAAACAAATCAACACTCGGGCAGAGggttgagtttgatcgtcttacagactta ttgcgtgcaagaaccattgagtctgatccacctaaaccaattgtttctcgtgaggaaaagaatg aagaaagt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1656 Transcript exons: 291098196-291098364,291099845-291100129,291100945-291101 022,291101653-291102309,291102397-291102863 GGTTGAGTTTGATCGTCTTACAGACTTATTGCGTGCAAGAACCATTGAGTCTGATCCACCTAAA CCAATTGTTTCTCGTGAGGAAAAGAATGAAGAAAGTATCAAAGTTGATGGAATTAGAGGCTCAG CGTTACGTCATATGGACCTAGATGATTCTCCTGCTGTTAAAGTACATAATCATGGTGCTAGTTC TCCTGCAGAACTCGCGAAACAATATATGAGCTCTCGTTATTTGAGGGAACCCCAATCCAGTAGT CTGCGGAGCCGATTGTTTCTTGAGAATAAAGGTGAAGCAAGCAACACTGTCAATGATAGGAGGT CTGTACCACCAATTGTTCAGACACCACTTGAACTTCGGAATGAAAACCCTGGTCTCCCTGTAAA TGGCTATGTGACTTCGGGATTACGTGGGCGTTCAGCGATATATAGAATGTCTCGCTCTCCATAT TTTAAGGGTCAGAACTATTCCAGTGATTTGAACACGTCTTCATTGTCCCAACGATCACAAAGCT TGCATGTTGGTGGCAGGCAGGTCTTGAAACGAAGCGGGGCTGAATTAGAGAATGAACTTGGATC TATAGGCCCCATTCGTAGAATTCGGCAGAAATCAAATATGATGTCTTCATTTAGAGATTCTCGT GCAAATCCTAAAGGAAACCTTCTTACTAGCCATATAAGTAGTACTGATTTCACTGAAGACGGTG CATCCATTCAGTCTCCGAGCTCAAAAAAATTATTGGTTGGGAGTAGTCAATCTCTGCGACCCTT AGAATCCCAAAAGAATGAGGGAGATGGTAAATCTAGTGATAGCATTCCACCCATACCAGCTCAA TCAAACAAGATGGCTGAAAAGATATTTGAGCAGCTTAATATAATAGCTCCATCGCCAAAACAAC AACAGTCTGTTACTCTGAATGCTAGTAACTCTATGTCAAAGAAACCTGTTTTTCAAGATGCTGG GTCAAGCAGTATGTATAACCAATCTAGTTCCCTGAAGTTTCAAGATTTGGATGGTGCAAATGGA CCCCATGATACAAACTTGAATGGTTCCCTGCTGAAGAAAGACAAGCTAAATATAATAAAAGACG GATCGCCAAAAGCTGCCTTTTCTGATAGACCTGCCCTTTTGGGGAACTCGGTTTCTGCTTCTAA ATCATGGACGCCAGCCTTTAAAATGGCTGTGATAGAGGACTTACCAGAGTTGGATGATGATCTG GAGGTCCTTATTCAATCAAGTAAGATAGAGGTTGAAACAACTGAGCAGAAAATTGATTCAAATA GAAAAGAACAGAAGGTTGAACAAAATATATTAGAGCAAAGGGTTGAACCGAACTTGAAGAACAT TGCTGGTTCTACGATTAGTGAACAGCCTGTAGCATCACTGTCTAAAACTGTCACTTCATCTGGT GGTTTATTTTTATCAAATGATCCTGGGAAGGCAGTTCCCAAAGCTTCTGTGGACAATAATACCG AATTTGCATTCTCAAATGGGCCTCCTGGCACCCGCCCTGCAACTGGTGTATCAGCAATGCCACT TGCTTCAGTTAATAACGATAAACAGACTGGTGCTTCAAATTTCATTTTCGGCATCAAGCAGCCA ATTACGTCAGATTTTGAAACATCAACTGCAAAAAACAAATCAACACTCGGGCAGAG
Genomic sequence	GGTTGAGTTTGATCGTCTTACAGACTTATTGCGTGCAAGAACCATTGAGTCTGATCCACCTAAA CCAATTGTTTCTCGTGAGGAAAAGAATGAAGAAAGTATCAAAGTTGATGGAATTAGAGGCTCAG CGTTACGTCATATGGACCTAGATGATTCTCCTGCTGTTAAAGTAAGGATTCAGCTTACAAGCAT TTTATGTTATTCATGAATATGGAATAACAGAACATTCTGTTATCCAATGCCTGAATACCATGAA ATTTCATGCTGTTAGTAGAGCCAAGAGGAAGGCTTGTACAATTACAATTCCTTTTGTAGTATCT CTATGGTCATGTGGTATTACTGTGTTTTACCTTCTTCAAATTATGGCTGTTTTTTCTTAATGTT TTAATTTGATATCATTTCCTCGGAGTTCTGTGTGTATCACCAAGGCGGTAATGGGAGGTGAAGG CATGAGACGAGGTTATGTCAGGAACAGTGGAATGCAGCAGAGAAAGTAGCAAAGAAAATGGGAA AAAATAAATAAAGGGGAGGTGGGTGGGGGGCAAACCCAGCACACCGTCAAGTCTGTACCCTCTC TCTCCGTGACTTTCTGAATCCTGAGCTTCTGATTGCTCGATGTCCAAAATGTACTGCTTGCTGC AGTGCTGCTGCTCCCTCTCTGCTGGTTACACACCCTATCTGTGGCCCTCTTCTGCGACCACCCT TCCTGAAGGGGTGTGCTGCACTGGCCATCAACACCAAGCTTGGTGGGGGTGGAGGAGATGGTGG CTGCTTGGCCCCGTCCACTTGCCCACCTCTTCATATTTTGTTCTTCTCTTCTCACTTTTTCTGG TAAAGTGTCCATTATGCCTAGCATTGCTGATGCGCCTTGTCTATATTGTGTATCACTTAGATCC CTTAGAGCTGCAAATTTATGTTACCAAAAACTTGGCTCTATTTAAGGTTAATTTTGGTTATTTG TACGATAAATCAGAATAGGGGAACAATACTGAGATGTTCCCCATATAATTTGAAGACTTTATTT AAATTAAAGACCGTCAATTCTACATTTATGATTTATTTCAGATAAAAAACACATGACAAACAAC AGCTTATGGTTGAAATAAATTCCCATGCCATCTCTAGTTACTATTTTTTTGTTCCCTATTGACT CCTAGTTAGTTTGGGGCCCTTGGTGTCCTAAATACAAGTGTTCAAAAGGCGTTGTTCCATGCTC GCCTAGGTGCGCCTCTGCGCTGGGCGGAGGGGTACCACCTTTCTTGGGGGGTGGGGGGTGGGGT GGAGGAAGGGACGTCAGGCGGAGGTCGGCCGGTGGGGAGGAGCAGCCTCAGTCGGAGATTATTA GCTTCAGAGCCTGTTGTTACTGCACTAAAAATATGTTGTCAATAAAGCTGGTGAGATTGTTGGA TTCGTGTTTTTTCCTGTACTAATGTAAAATCATTAGTTTGATTGGGTGAATGTAGCTCGTAAGC ATAATGACTTGTCTTGGTATGACTTTTTAGTACTATATATACACTTGCTAACTTGCAGCATCAA CTGTTTAGTGAGCTAGGAAGAAGCTAACAAATGTAGCTTTGCTTTGAGGCATTGTTGTCTGAAA CTTTTGTTACCTTTTATATTTAATTACTATCTAATTTGCACTCTTGTAGGTACATAATCATGGT GCTAGTTCTCCTGCAGAACTCGCGAAACAATATATGAGCTCTCGTTATTTGAGGGAACCCCAAT CCAGTAGTCTGCGGAGCCGATTGTTTCTTGAGAATAAAGGTGAAGCAAGCAACACTGTCAATGA TAGGAGGTCTGTACCACCAATTGTTCAGACACCACTTGAACTTCGGAATGAAAACCCTGGTCTC CCTGTAAATGGCTATGTGACTTCGGGATTACGTGGGCGTTCAGCGATATATAGAATGTCTCGCT CTCCATATTTTAAGGTTGGTATATATCTAGTGCACATTATGTCAGGTTCTTGCAGTTGGTAGTT TTCTGATAAGTGTAGTTTTGCATTGTAAGAGCATCTCCAAGAGGGACCCGAAAAAAAAACTTGA CCTGCGGGGGGTAAGACAGCCCCCGGGTATTGTATTAAGAGGGGCCCGAAACAAGGTTGTATTT TAAAATATGGGGCTCAGGGCCATAAAATGCCCTCCAACAGTGGCCCTATTTGATAAAAATTCAT CAAACGATTATAGACCTCAGTCTCTCGGGTCCTAAATATAGTACCCCATATATTTGGGCCCTAT CATCGTTTCCTCCTAATCTAATACTATTTGTTTTGTAATAACGTGATTTATTTGATTATTTCCT AAATAGCATTATTTAAGGCCTAATTGTTGGAGCAACAAAATTTCTTTTAAGGCCCTAAATACCT TAATTCGGTCCTATTTTAATTTTTAGGGCTTTATTTTAAAGCTCTTTGTTGGAGATGCTCTAAT GGCCTCAAAAACATGACAAATGTAAATGCTAATATAAAATTGCAGCAGCATCTAAGTTTACTTG TATCACCTTTCCTTATGTACTTAACAAATTGTTGATGGCCAGTGCTGGTCAGATTTAAAATAGT TTGACTTAATGAGTTCTAGGATATCATTTTTTTTCTTTACCAGAGGTACAAACACATTTTTATT TGTATGTGCTCCACACAAAATGCTCTTGGTTCTACAGCACTAGAATTTTTCTGCTTGTTCATTT AATGTGATGAGAAGACCTTCCAAAGTTATTCGAAGTAATTTTTTGTTTATGCATCTCGTAGGGT CAGAACTATTCCAGTGATTTGAACACGTCTTCATTGTCCCAACGATCACAAAGCTTGCATGTTG GTGGCAGGCAGGTAATTTATTAAACATTTTGAGTATAGCGTTATGTACTGAAGTGTACATTTTT TTCTTGCTTTGTATTCACATATTAGAAATTGATATGGATGTTACAGAATTACGGTTGTGAACGT GTAAAATATATGTTTTCTTCTGATGTCCTTGATGTTTCACATGCAAGTATCTATATGATAAAAA ACATATCATTTTGTTTTATTGATGCTTGTATGATATCATGGAATCTAGACTTGTTGGCTATGTT GAAGTGTATATAAGTGGATTGCTTACCTTCACCTAATAGCTTAAGCTTTTGGGTTGAACTGGTT AGTGCGTCCACTCAAATGGTATCAAAGCCATAGGTATTGAGTTTGAATCCTAGAAGAGGCTTTT GTGCCTTCACCCCCCTTATTTCCACGTTTGCGCATTTCTCTCTGGCTGCACGTGAATTGGGGGG GGGGGGGGTTGAAGTGTATAAGTGGATTGCCTACCTTCTCCAAATAGCTTAAGCCTTTTGGGTT GAACTGGTTAGTGCGTCCACTCTAAAAGGCTACATCTTTGAGGAATTTTCTTTGTGGTGTATGT AGCTTCTGTGTAGTCTGAACTTTATGCACCAGAGTTTTCTCACTATACTGCCATCTTCATAACA GGTCTTGAAACGAAGCGGGGCTGAATTAGAGAATGAACTTGGATCTATAGGCCCCATTCGTAGA ATTCGGCAGAAATCAAATATGATGTCTTCATTTAGAGATTCTCGTGCAAATCCTAAAGGAAACC TTCTTACTAGCCATATAAGTAGTACTGATTTCACTGAAGACGGTGCATCCATTCAGTCTCCGAG CTCAAAAAAATTATTGGTTGGGAGTAGTCAATCTCTGCGACCCTTAGAATCCCAAAAGAATGAG GGAGATGGTAAATCTAGTGATAGCATTCCACCCATACCAGCTCAATCAAACAAGATGGCTGAAA AGATATTTGAGCAGCTTAATATAATAGCTCCATCGCCAAAACAACAACAGTCTGTTACTCTGAA TGCTAGTAACTCTATGTCAAAGAAACCTGTTTTTCAAGATGCTGGGTCAAGCAGTATGTATAAC CAATCTAGTTCCCTGAAGTTTCAAGATTTGGATGGTGCAAATGGACCCCATGATACAAACTTGA ATGGTTCCCTGCTGAAGAAAGACAAGCTAAATATAATAAAAGACGGATCGCCAAAAGCTGCCTT TTCTGATAGACCTGCCCTTTTGGGGAACTCGGTTTCTGCTTCTAAATCATGGACGCCAGCCTTT AAAATGGCTGTGATAGAGGTATGAGAAATGTGTTGTTTTTATCGAATGTAGTGCAGTCATATAT CCAATACTTGTGACCTGATTAGTTTTTCTTATGTTTTCAAGGACTTACCAGAGTTGGATGATGA TCTGGAGGTCCTTATTCAATCAAGTAAGATAGAGGTTGAAACAACTGAGCAGAAAATTGATTCA AATAGAAAAGAACAGAAGGTTGAACAAAATATATTAGAGCAAAGGGTTGAACCGAACTTGAAGA ACATTGCTGGTTCTACGATTAGTGAACAGCCTGTAGCATCACTGTCTAAAACTGTCACTTCATC TGGTGGTTTATTTTTATCAAATGATCCTGGGAAGGCAGTTCCCAAAGCTTCTGTGGACAATAAT ACCGAATTTGCATTCTCAAATGGGCCTCCTGGCACCCGCCCTGCAACTGGTGTATCAGCAATGC CACTTGCTTCAGTTAATAACGATAAACAGACTGGTGCTTCAAATTTCATTTTCGGCATCAAGCA GCCAATTACGTCAGATTTTGAAACATCAACTGCAAAAAACAAATCAACACTCGGGCAGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.047059311

Conservation Information
Conserved circRNAs	NA
PMCS	0.047059311

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							291098336-291102860(+)
291102633-291098341(+)
291098242-291102437(-)
						
					

						Potential amino acid sequence
						
							MDLDDSPAVKVHNHGASSPAELAKQYMSSRYLREPQSSSLRSRLFLENKGEASNTVNDRRSVPP
IVQTPLELRNENPGLPVNGYVTSGLRGRSAIYRMSRSPYFKGQNYSSDLNTSSLSQRSQSLHVG
GRQVLKRSGAELENELGSIGPIRRIRQKSNMMSSFRDSRANPKGNLLTSHISSTDFTEDGASIQ
SPSSKKLLVGSSQSLRPLESQKNEGDGKSSDSIPPIPAQSNKMAEKIFEQLNIIAPSPKQQQSV
TLNASNSMSKKPVFQDAGSSSMYNQSSSLKFQDLDGANGPHDTNLNGSLLKKDKLNIIKDGSPK
AAFSDRPALLGNSVSASKSWTPAFKMAVIEDLPELDDDLEVLIQSSKIEVETTEQKIDSNRKEQ
KVEQNILEQRVEPNLKNIAGSTISEQPVASLSKTVTSSGGLFLSNDPGKAVPKASVDNNTEFAF
SNGPPGTRPATGVSAMPLASVNNDKQTGASNFIFGIKQPITSDFETSTAKNKSTLGQRVEFDRL
TDLLRARTIESDPPKPIVSREEKNEESIKVDGIRGSALRHMDLDDSPAVKVHNHGASSPAELAK
QYMSSRYLREPQSSSLRSRLFLENKGEASNTVNDRRSVPPIVQTPLELRNENPGLPVNGYVTSG
LRGRSAIYRMSRSPYFKGQNYSSDLNTSSLSQRSQSLHVGGRQVLKRSGAELENELGSIGPIRR
IRQKSNMMSSFRDSRANPKGNLLTSHISSTDFTEDGASIQSPSSKKLLVGSSQSLRPLESQKNE
GDGKSSDSIPPIPAQSNKMAEKIFEQLNIIAPSPKQQQSVTLNASNSMSKKPVFQDAGSSSMYN
QSSSLKFQDLDGANGPHDTNLNGSLLKKDKLNIIKDGSPKAAFSDRPALLGNSVSASKSWTPAF
KMAVIEDLPELDDDLEVLIQSSKIEVETTEQKIDSNRKEQKVEQNILEQRVEPNLKNIAGSTIS
EQPVASLSKTVTSSGGLFLSNDPGKAVPKASVDNNTEFAFSNGPPGTRPATGVSAMPLASVNND
KQTGASNFIFGIKQPITSDFETSTAKNKSTLGQRVEFDRLTDLLRARTIESDPPKPIVSREEKN
EESIKVDGIRGSALRHMDLDDSPAVKVHNHGASSPAELAKQYMSSRYLREPQSSSLRSRLFLEN
KGEASNTVNDRRSVPPIVQTPLELRNENPGLPVNGYVTSGLRGRSAIYRMSRSPYFKGQNYSSD
LNTSSLSQRSQSLHVGGRQVLKRSGAELENELGSIGPIRRIRQKSNMMSSFRDSRANPKGNLLT
SHISSTDFTEDGASIQSPSSKKLLVGSSQSLRPLESQKNEGDGKSSDSIPPIPAQSNKMAEKIF
EQLNIIAPSPKQQQSVTLNASNSMSKKPVFQDAGSSSMYNQSSSLKFQDLDGANGPHDTNLNGS
LLKKDKLNIIKDGSPKAAFSDRPALLGNSVSASKSWTPAFKMAVIEDLPELDDDLEVLIQSSKI
EVETTEQKIDSNRKEQKVEQNILEQRVEPNLKNIAGSTISEQPVASLSKTVTSSGGLFLSNDPG
KAVPKASVDNNTEFAFSNGPPGTRPATGVSAMPLASVNNDKQTGASNFIFGIKQPITSDFETST
AKNKSTLGQRVEFDRLTDLLRARTIESDPPKPIVSREEKNEESIKVDGIRGSALRHMDLDDSPA
VKVHNHGASSPAELAKQYMSSRYLREPQSSSLRSRLFLENKGEASNTVNDRRSVPPIVQTPLEL
RNENPGLPVNGYVTSGLRGRSAIYRMSRSPYFKGQNYSSDLNTSSLSQRSQSLHVGGRQVLKRS
GAELENELGSIGPIRRIRQKSNMMSSFRDSRANPKGNLLTSHISSTDFTEDGASIQSPSSKKLL
VGSSQSLRPLESQKNEGDGKSSDSIPPIPAQSNKMAEKIFEQLNIIAPSPKQQQSVTLNASNSM
SKKPVFQDAGSSSMYNQSSSLKFQDLDGANGPHDTNLNGSLLKKDKLNIIKDGSPKAAFSDRPA
LLGNSVSASKSWTPAFKMAVIEDLPELDDDLEVLIQSSKIEVETTEQKIDSNRKEQKVEQNILE
QRVEPNLKNIAGSTISEQPVASLSKTVTSSGGLFLSNDPGKAVPKASVDNNTEFAFSNGPPGTR
PATGVSAMPLASVNNDKQTGASNFIFGIKQPITSDFETSTAKNKSTLGQ(+)
MILGRQFPKLLWTIIPNLHSQMGLLAPALQLVYQQCHLLQLITINRLVLQISFSASSSQLRQIL
KHQLQKTNQHSGRGLSLIVLQTYCVQEPLSLIHLNQLFLVRKRMKKVSKLMELEAQRYVIWT*(
+)
MVLARNKSVRRSNSTLCPSVDLFFAVDVSKSDVIGCLMPKMKFEAPVCLSLLTEASGIADTPVA
GRVPGGPFENANSVLLSTEALGTAFPGSFDKNKPPDEVTVLDSDATGCSLIVEPAMFFKFGSTL
CSNIFCSTFCSFLFESIFCSVVSTSILLD*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	291098336-291102860(+) 291102633-291098341(+) 291098242-291102437(-)
Potential amino acid sequence	MDLDDSPAVKVHNHGASSPAELAKQYMSSRYLREPQSSSLRSRLFLENKGEASNTVNDRRSVPP IVQTPLELRNENPGLPVNGYVTSGLRGRSAIYRMSRSPYFKGQNYSSDLNTSSLSQRSQSLHVG GRQVLKRSGAELENELGSIGPIRRIRQKSNMMSSFRDSRANPKGNLLTSHISSTDFTEDGASIQ SPSSKKLLVGSSQSLRPLESQKNEGDGKSSDSIPPIPAQSNKMAEKIFEQLNIIAPSPKQQQSV TLNASNSMSKKPVFQDAGSSSMYNQSSSLKFQDLDGANGPHDTNLNGSLLKKDKLNIIKDGSPK AAFSDRPALLGNSVSASKSWTPAFKMAVIEDLPELDDDLEVLIQSSKIEVETTEQKIDSNRKEQ KVEQNILEQRVEPNLKNIAGSTISEQPVASLSKTVTSSGGLFLSNDPGKAVPKASVDNNTEFAF SNGPPGTRPATGVSAMPLASVNNDKQTGASNFIFGIKQPITSDFETSTAKNKSTLGQRVEFDRL TDLLRARTIESDPPKPIVSREEKNEESIKVDGIRGSALRHMDLDDSPAVKVHNHGASSPAELAK QYMSSRYLREPQSSSLRSRLFLENKGEASNTVNDRRSVPPIVQTPLELRNENPGLPVNGYVTSG LRGRSAIYRMSRSPYFKGQNYSSDLNTSSLSQRSQSLHVGGRQVLKRSGAELENELGSIGPIRR IRQKSNMMSSFRDSRANPKGNLLTSHISSTDFTEDGASIQSPSSKKLLVGSSQSLRPLESQKNE GDGKSSDSIPPIPAQSNKMAEKIFEQLNIIAPSPKQQQSVTLNASNSMSKKPVFQDAGSSSMYN QSSSLKFQDLDGANGPHDTNLNGSLLKKDKLNIIKDGSPKAAFSDRPALLGNSVSASKSWTPAF KMAVIEDLPELDDDLEVLIQSSKIEVETTEQKIDSNRKEQKVEQNILEQRVEPNLKNIAGSTIS EQPVASLSKTVTSSGGLFLSNDPGKAVPKASVDNNTEFAFSNGPPGTRPATGVSAMPLASVNND KQTGASNFIFGIKQPITSDFETSTAKNKSTLGQRVEFDRLTDLLRARTIESDPPKPIVSREEKN EESIKVDGIRGSALRHMDLDDSPAVKVHNHGASSPAELAKQYMSSRYLREPQSSSLRSRLFLEN KGEASNTVNDRRSVPPIVQTPLELRNENPGLPVNGYVTSGLRGRSAIYRMSRSPYFKGQNYSSD LNTSSLSQRSQSLHVGGRQVLKRSGAELENELGSIGPIRRIRQKSNMMSSFRDSRANPKGNLLT SHISSTDFTEDGASIQSPSSKKLLVGSSQSLRPLESQKNEGDGKSSDSIPPIPAQSNKMAEKIF EQLNIIAPSPKQQQSVTLNASNSMSKKPVFQDAGSSSMYNQSSSLKFQDLDGANGPHDTNLNGS LLKKDKLNIIKDGSPKAAFSDRPALLGNSVSASKSWTPAFKMAVIEDLPELDDDLEVLIQSSKI EVETTEQKIDSNRKEQKVEQNILEQRVEPNLKNIAGSTISEQPVASLSKTVTSSGGLFLSNDPG KAVPKASVDNNTEFAFSNGPPGTRPATGVSAMPLASVNNDKQTGASNFIFGIKQPITSDFETST AKNKSTLGQRVEFDRLTDLLRARTIESDPPKPIVSREEKNEESIKVDGIRGSALRHMDLDDSPA VKVHNHGASSPAELAKQYMSSRYLREPQSSSLRSRLFLENKGEASNTVNDRRSVPPIVQTPLEL RNENPGLPVNGYVTSGLRGRSAIYRMSRSPYFKGQNYSSDLNTSSLSQRSQSLHVGGRQVLKRS GAELENELGSIGPIRRIRQKSNMMSSFRDSRANPKGNLLTSHISSTDFTEDGASIQSPSSKKLL VGSSQSLRPLESQKNEGDGKSSDSIPPIPAQSNKMAEKIFEQLNIIAPSPKQQQSVTLNASNSM SKKPVFQDAGSSSMYNQSSSLKFQDLDGANGPHDTNLNGSLLKKDKLNIIKDGSPKAAFSDRPA LLGNSVSASKSWTPAFKMAVIEDLPELDDDLEVLIQSSKIEVETTEQKIDSNRKEQKVEQNILE QRVEPNLKNIAGSTISEQPVASLSKTVTSSGGLFLSNDPGKAVPKASVDNNTEFAFSNGPPGTR PATGVSAMPLASVNNDKQTGASNFIFGIKQPITSDFETSTAKNKSTLGQ(+) MILGRQFPKLLWTIIPNLHSQMGLLAPALQLVYQQCHLLQLITINRLVLQISFSASSSQLRQIL KHQLQKTNQHSGRGLSLIVLQTYCVQEPLSLIHLNQLFLVRKRMKKVSKLMELEAQRYVIWT( +) MVLARNKSVRRSNSTLCPSVDLFFAVDVSKSDVIGCLMPKMKFEAPVCLSLLTEASGIADTPVA GRVPGGPFENANSVLLSTEALGTAFPGSFDKNKPPDEVTVLDSDATGCSLIVEPAMFFKFGSTL CSNIFCSTFCSFLFESIFCSVVSTSILLD(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020

circRNA

Detail information of Zm00001d034371_circ_g.1

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