Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT5G02380_circ_g.4 |
ID in PlantcircBase | ath_circ_035992 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr5: 507100-507244 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | CIRCexplorer, KNIFE, PcircRNA_finder |
Parent gene | AT5G02380 |
Parent gene annotation |
Metallothionein-like protein 2B |
Parent gene strand | - |
Alternative splicing | AT5G02380_circ_g.2 AT5G02380_circ_g.3 5_circ_igg.5 AT5G02380_circ_g.6 AT5G02380_circ_g.7 |
Support reads | 6 |
Tissues | leaf, aerial |
Exon boundary | Yes-Yes |
Splicing signals | GA-AC |
Number of exons covered | AT5G02380.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.306237081 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |