Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d037156_circ_g.2 |
ID in PlantcircBase | zma_circ_002274 |
Alias | circ1971 |
Organism | Zea mays |
Position | chr6: 114077314-114077674 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d037156 |
Parent gene annotation |
Putative PHD-finger domain containing protein family |
Parent gene strand | - |
Alternative splicing | Zm00001d037156_circ_g.3 |
Support reads | 9 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d037156_T066:1 Zm00001d037156_T104:1 Zm00001d037156_T100:1 Zm00001d037156_T098:1 Zm00001d037156_T082:1 Zm00001d037156_T030:1 Zm00001d037156_T038:1 Zm00001d037156_T004:1 Zm00001d037156_T093:1 Zm00001d037156_T043:1 Zm00001d037156_T052:1 Zm00001d037156_T028:1 Zm00001d037156_T097:1 Zm00001d037156_T006:1 Zm00001d037156_T073:1 Zm00001d037156_T014:1 Zm00001d037156_T084:1 Zm00001d037156_T074:1 Zm00001d037156_T032:1 Zm00001d037156_T090:1 Zm00001d037156_T086:1 Zm00001d037156_T036:1 Zm00001d037156_T003:1 Zm00001d037156_T087:1 Zm00001d037156_T081:1 Zm00001d037156_T018:1 Zm00001d037156_T108:1 Zm00001d037156_T076:1 Zm00001d037156_T055:1 Zm00001d037156_T044:1 Zm00001d037156_T092:1 Zm00001d037156_T060:1 Zm00001d037156_T008:1 Zm00001d037156_T020:1 Zm00001d037156_T094:1 Zm00001d037156_T047:1 Zm00001d037156_T099:1 Zm00001d037156_T034:1 Zm00001d037156_T040:1 Zm00001d037156_T102:1 Zm00001d037156_T106:1 Zm00001d037156_T083:1 Zm00001d037156_T049:1 Zm00001d037156_T001:1 Zm00001d037156_T070:1 Zm00001d037156_T064:1 Zm00001d037156_T062:1 Zm00001d037156_T024:1 Zm00001d037156_T005:1 Zm00001d037156_T072:1 Zm00001d037156_T051:1 Zm00001d037156_T079:1 Zm00001d037156_T010:1 Zm00001d037156_T023:1 Zm00001d037156_T012:1 Zm00001d037156_T068:1 Zm00001d037156_T015:1 Zm00001d037156_T019:1 Zm00001d037156_T026:1 Zm00001d037156_T046:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.15428211 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |