Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | Zm00001d012865_circ_g.1 |
| ID in PlantcircBase | zma_circ_001856 |
| Alias | circ851 |
| Organism | Zea mays |
| Position | chr5: 1350344-1355092 JBrowse» |
| Reference genome | AGPv4.38 |
| Type | ui-circRNA |
| Identification method | CIRI |
| Parent gene | Zm00001d012865 |
| Parent gene annotation |
LUC7 related protein |
| Parent gene strand | + |
| Alternative splicing | Zm00001d012865_circ_g.2 Zm00001d012865_circ_g.3 |
| Support reads | 2 |
| Tissues | seedling leaves |
| Exon boundary | No-Yes |
| Splicing signals | GT-CA |
| Number of exons covered | Zm00001d012865_T031:6 Zm00001d012865_T024:6 Zm00001d012865_T019:6 Zm00001d012865_T016:6 Zm00001d012865_T014:6 Zm00001d012865_T028:6 Zm00001d012865_T010:6 Zm00001d012865_T026:6 Zm00001d012865_T008:6 Zm00001d012865_T018:6 Zm00001d012865_T027:6 Zm00001d012865_T025:6 Zm00001d012865_T001:6 Zm00001d012865_T012:6 Zm00001d012865_T021:6 Zm00001d012865_T003:6 Zm00001d012865_T004:6 Zm00001d012865_T002:6 Zm00001d012865_T029:6 Zm00001d012865_T013:6 Zm00001d012865_T011:6 Zm00001d012865_T023:6 Zm00001d012865_T015:5 Zm00001d012865_T007:6 Zm00001d012865_T020:6 Zm00001d012865_T030:6 Zm00001d012865_T006:6 Zm00001d012865_T009:6 Zm00001d012865_T017:6 Zm00001d012865_T022:6 Zm00001d012865_T005:5 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.012514308 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Chen et al., 2017b |