Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d012865_circ_g.1 |
ID in PlantcircBase | zma_circ_001856 |
Alias | circ851 |
Organism | Zea mays |
Position | chr5: 1350344-1355092 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d012865 |
Parent gene annotation |
LUC7 related protein |
Parent gene strand | + |
Alternative splicing | Zm00001d012865_circ_g.2 Zm00001d012865_circ_g.3 |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d012865_T031:6 Zm00001d012865_T024:6 Zm00001d012865_T019:6 Zm00001d012865_T016:6 Zm00001d012865_T014:6 Zm00001d012865_T028:6 Zm00001d012865_T010:6 Zm00001d012865_T026:6 Zm00001d012865_T008:6 Zm00001d012865_T018:6 Zm00001d012865_T027:6 Zm00001d012865_T025:6 Zm00001d012865_T001:6 Zm00001d012865_T012:6 Zm00001d012865_T021:6 Zm00001d012865_T003:6 Zm00001d012865_T004:6 Zm00001d012865_T002:6 Zm00001d012865_T029:6 Zm00001d012865_T013:6 Zm00001d012865_T011:6 Zm00001d012865_T023:6 Zm00001d012865_T015:5 Zm00001d012865_T007:6 Zm00001d012865_T020:6 Zm00001d012865_T030:6 Zm00001d012865_T006:6 Zm00001d012865_T009:6 Zm00001d012865_T017:6 Zm00001d012865_T022:6 Zm00001d012865_T005:5 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.012514308 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |