Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Solyc06g071960.2_circ_g.1 |
ID in PlantcircBase | sly_circ_002058 |
Alias | SL3.0ch06:44468616|44469617 |
Organism | Solanum lycopersicum |
Position | chr6: 44327188-44328189 JBrowse» |
Reference genome | SL2.50.38 |
Type | ei-circRNA |
Identification method | CIRI; find_circ |
Parent gene | Solyc06g071960.2 |
Parent gene annotation |
Nucleoside diphosphate kinase |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | NA |
Tissues | leaf |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Solyc06g071960.2.1:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.185486818 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | responsive to low-temperature stress (acting as miRNA sponges) |
Other Information | |
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References | Yang et al., 2020 |