Plant Circular RNA Database

Detail information of Csa2G009280_circ_g.3

			
						 General Information
					
						CircRNA Name
						Csa2G009280_circ_g.3
					
						ID in PlantcircBase
						csa_circ_000793
					
						Alias
						Chr2:1541575_1546099
					
						Organism
						
							Cucumis sativus						
					
						Position
						
							chrChr2: 1541575-1546099  JBrowse»						
					
						Reference genome
						
							Cucumis sativus v1.5						
					
						Type  
						
							e-circRNA							
									
						Identification method
						Find_circ
					
						Parent gene
						
							Csa2G009280						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							Csa2G009280_circ_g.6 						
					
						Support reads
						NA
					
						Tissues
						leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Csa2G009280.1:5
Csa2G009280.2:5

General Information
CircRNA Name	Csa2G009280_circ_g.3
ID in PlantcircBase	csa_circ_000793
Alias	Chr2:1541575_1546099
Organism	Cucumis sativus
Position	chrChr2: 1541575-1546099 JBrowse»
Reference genome	Cucumis sativus v1.5
Type	e-circRNA
Identification method	Find_circ
Parent gene	Csa2G009280
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	Csa2G009280_circ_g.6
Support reads	NA
Tissues	leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Csa2G009280.1:5 Csa2G009280.2:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTTAAATGCTTACTTACTACTTTTCTATTACAGGAATTAAAAGTGAAGCTGAAAAATGTGTCAT
GGGCTATAGCTGGCTTTTCTTTGAAGCGAAAATCAGatcccaatgcaaaagagactttatcttc
tcccgacaatggtttagaggacaagatggaacatatagtaagagaaatattgtgtactattatt
atgctact

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							ATCCCAATGCAAAAGAGACTTTATCTTCTCCCGACAATGGTTTAGAGGACAAGATGGAACATAT
AGTAAGAGAAATATTGTGTACTATTATTATGCTACTCTGTTTTTGTTAAGAAGCAGCTCATAGT
TCATTCATATGGTTTCTGTGATTTGGTGCCAGAGAGGCTGCTGTTAAACATCGATAATTATTCT
TGTGGTTATTACTGTTGGAATACACCATATTCTTGAAAAGAGAGTTATATCGAATGATTTATTT
ATTTATTTTTGTTTATTCACAATCTTAAAATACAGTGTTCTTCTTGTAGAAATGGATATTAACA
AAATAGGCGACAATTTGATGTTATGGCTTCTTGTGCTTGTTTTGTTACACATTACAATATAAAA
TGTTGTATTGTTGTAGAAAGAGTAGATAGAATTATGAGTTTATCTTTTTTGTAATCTGAAATTT
AAGTTCTGCCACTGTTATGCCCATATTGCTTAGACAACCACACACAGCTGATCTTGCTGTAAAA
CGCTCTCTAGTAACTAAAAAGGTCACATATGATGTTATCTCAAATTCAGAACTTGTCCTATGGA
TTACCTGAAATAAGTCCGAATGTTAGAGGGTTGATATAATTTTAAATTTACCTTCACCATAAGC
TTGCATTTGAGTCGATAAGTGATTCTATTGAGGTAGGAGGTTCAGAAAATTATGTGTTTGAACC
TCCACAATGCTATTTTCTTTTCAATTAACATTGATTTCTACTTGTTGGGCTTTTTACAAAATTT
CAAGCGTTATTTGGAAAATGTTAAAAGTATTGGTATAATTAAATTTACTCTAACTCTTCAACTT
AAACTTTTGGGTCAATCGGTGATTTAACTTTGCATATGAATAGAAGGTTCTGTGTTCAAACTTT
TGCAATGTTATTCATTTCACAATTAATATTGACTTCCAATTTTTGGGTCCTCTACATCTTCAAA
CCCACAAGTGGAGGGAGTGTTGGAGTTTTGATATATTCAATTTACCTTCACTCATAAGCTTCAG
TTTTTGGGTCAATATGTGTTTTAACACCTACTTTATTGCTTTATCAGTGAATGGGTTGCAAAAG
CATTTGAATTGTGCTGTTTTTATTTGCTAGCCTTGTGAAGAATTCTGCTCAAATATTTTGTTGG
CCTAACCATACTTTCTCTCTGTTCATGCAGCAATATTGCAGGTTCCTTGCAGTCATAAAAAGAA
GCCACCTAGATCTGGATACCGACGTTCACGGATTAACCGTATGAATTCTTTTTCCCTTGACTCT
TTTCTCCCTACTTTTATGATGTGATTAAGGAGAAAGAGACTTTTATAACTATTTCTGTGTGTGT
GCACGTTTTTTATTTATTTGTTTGTATTAAACTACCAATTCATCCAAAAGCTGAAGCTGGTGGT
TAAAGGCAAATTTAATTATATATCACAAACAGTTTGTTTGTTTATTCTAAGGCTTGAATAGGGT
GAACTAGGAGGCACAAACACATTAGTTTGGCTTGCATGCCAGACACATGTTGAATACTTAGACC
CTCCAACACATATTGGACATGTATCGGAAACTTGAAACTTGTTAGTGCAATAAATGTCTAAACA
TTATTTGTACAAAGTCAGCATAGATCCCACTTGTTAGTCACATATCAAACACTTGTTAAGTACT
AAATAGATACGTATAAAACAAAAATACATCAAACTCATTTTTAAAGCATATTAATGCATAAAAT
CACGGACTTTGAATTTTATTCCAGTGTGACATTGGTATATGTATGTGTATATTAAAAATATATA
TATTTAATAAACATGTCCTAGCTTTGGAAAATAATGTGCTGTTGTGTTCGTGTCGAATCCACTA
TTTGTATATCTGATGATTTATTCACTAATGTGCACATAATTCACACCTATCTGTATATGTGTCT
ATCATTGAATCCACTATTGTATATCTGATGTCTAGAATTCGCAAACAAGAAGCCATCATTGTCA
AGATTGACTTTGAAAAGGTGTGATCATGACTTCCAGGATAGGGTGTTGGCAAAGAAAGGTTTTG
GGTTTAAATGGAGGTTGTGAATTTGGAGTAGTATTAGATGAATGAGGCGTTTTTTTTAGAAAAA
CACAACAAAACTTTTCACTAATATAATTAAAAGAGACTATTTGATATGAAAACCCTAGGAATTG
CCTAGGAACCCAATTGGTGAACCCCTAAATATCAAATCTTAAAACCCCTAAATCAATTTGACAG
CAATCCAAAGAGAAAGACTAGAAGTGGATTACCTTTTGATCGAAGACCAAGAGATAAGGAGAAC
TAGTTAGTTCCTCACTCCAAGTTCAAACACTCCACAAGCAAAGTGAGCAAACTTATCTGAATGT
TCTTGGCATGCAACCTTGGATCAAGTATTGCAAAAGGTGGTGAGAATTTCTATTGATAGGAAAT
ACCCTAAACATCAATTGTCAAATACTAACTTGAAACAACCTACAGGAAAGGCTTAAATAGCCTT
CCAATAAAACCCTAATGCATTGTGAAAAAACTATTAACCATACTTAAATGTTATTAAAAAGGAT
AAAAACTGAAAAAAATTTAAATTAGACCACAATTATGAAATAAAATTTAATTGATAATTTGATT
TTTGGTTGGTTCATATCACTATTGCTCAAGTTACAAACTAGACATACTAATCCAAGTAAACTAG
AAGATAAGGGGATCAACAAGCAGACCTAGATATCTCAACTAGGTTGACACACCCTTAAACGCCC
TCATGATATCCCGATATTGAAATAAGAGCCAATGCTCAACTTAAGAAGGTACAATAAAATATAA
CATGAACTCATTAATTAGATAAAAAGAAAAGTTGAATCTAATCTAGGAAGATGAAAGCTCTTCA
ATTTAAACAGATGTCTTGCATTGAAAAGCTTGAAAATTGCTTGAGTTCAATCTTTTGCCTTGTT
GTGGAAGGTTAAAGTTGTTTATGTCAGTTCTCCATGGAAATATTAACACCTTCGGTAGGATTTT
GAGGAGGGTTCTCAATTTGATGGAGCCTTCGTGTTGCATTTGTAAATGGAGAGCAGCCAAGGAT
CTCTTGATTAAAGGAATATCCACTAGAGTTGTGAATTTGCATATGTAGCTTCGAGTAGTTTTTC
GGAGTTTGGGTATTGGTTTGGCCAGGCAATATTTTATTATTTCCACTGTCATTGCTTGTTCTCG
TTCTATAAATTTATAGTTTCAAGATGATTTTTTTCATGAATTGCGTTGAAAACTTTTATTTGAT
TTAATATAATTGTTTTTTTCCCTTGTAGCTTCAACGTGGGAAATAAGGTGCTTAAATACAGCTA
TGGGTTCAAATGCTCCAAAATGTCTTGTTACTCAAATACTAGAGATACAACCGGCAGGCTGGTT
CAAATGGCAGAGAAATCACCCTTCAAAGTTTGAAAAGAGTGTTCCTTATGCATTGTTGTGCCAA
GTTGCAGGTATGTTGATTACAAAAGACAATCATTGTATGTATTTTTAATTATTGTACTTTCATA
TCTGATTATATTTCATTACTACCTGTATAGACAATAGTTCGTTTGTAGCTATCCCTTCCAAGAA
AATATTTAACAGAAACAACCCCCATCTCTTTGGAACGAACTATTAACTGCTCTGAGTTGTAGAG
CATTTTTCCGTCCCTCTGAAAAGATGAGAAGACATCACAATCCTTAAAAAAGATACATGTGCTA
CTTCTCATTTCCAATTCATTTTGAGATGAAGCTCTATGTTTATCTAATATGGTATTAGAGTCCA
TGAAGTCCAAATACTGGTAAAAAAAAATAGCTTAAGAATAGTGAACTCAAAAAGTGGCACTTGT
TATTATGTCCTTTGTCTGCTTTGCCCAAATAAGTATTCAGTATTTACTTCTTTGCTATCTGGAA
CCATGCTTTAACTTTCAATAACATGGCTTAATCTTTTTAAGTTTTTATAACAACACCTAAAAAG
AATGAACTAGGGTTTTCATTCACTGGAAATTTTGTTTCTGGATTCCCAATTTTCAGGTCTAAAG
GAATATGTTTTGGCAAATCCTGCTCTAAACTATGAAAACCTGCCCACTGTTGTCCGTTCAAAAA
TCTCAGATGGCTCTACTACGAACAGTGACTATGATGATGGAGAAGTGCAGGATGAATTTTATGA
TGCAATTGCTGCCGATTCATCATCTTCGGAAGAGGAAAGTGATAATGATAAAGAACTTAACAAT
AAGGTAGTTCTCTTCTTCATTTGAATTAGATTTAGGTTCATTTCTTAATCCCTCACTAATCATT
CATCAAGATCTTGAGATTTTACGTCCCAAAGTTCACTTGCTCTGAAATTAAATGTCTTATTTAC
AGAAGCGAGAAATATATCATGTATGTATAGAAGGCCAAAAATACAACTCAAAAGGCAAAGGGGA
AGAGAGAAATTTAAATGCTTACTTACTACTTTTCTATTACAGGAATTAAAAGTGAAGCTGAAAA
ATGTGTCATGGGCTATAGCTGGCTTTTCTTTGAAGCGAAAATCAG
						
					

			
		

Sequences
Splice junction sequence	TTTAAATGCTTACTTACTACTTTTCTATTACAGGAATTAAAAGTGAAGCTGAAAAATGTGTCAT GGGCTATAGCTGGCTTTTCTTTGAAGCGAAAATCAGatcccaatgcaaaagagactttatcttc tcccgacaatggtttagaggacaagatggaacatatagtaagagaaatattgtgtactattatt atgctact
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	ATCCCAATGCAAAAGAGACTTTATCTTCTCCCGACAATGGTTTAGAGGACAAGATGGAACATAT AGTAAGAGAAATATTGTGTACTATTATTATGCTACTCTGTTTTTGTTAAGAAGCAGCTCATAGT TCATTCATATGGTTTCTGTGATTTGGTGCCAGAGAGGCTGCTGTTAAACATCGATAATTATTCT TGTGGTTATTACTGTTGGAATACACCATATTCTTGAAAAGAGAGTTATATCGAATGATTTATTT ATTTATTTTTGTTTATTCACAATCTTAAAATACAGTGTTCTTCTTGTAGAAATGGATATTAACA AAATAGGCGACAATTTGATGTTATGGCTTCTTGTGCTTGTTTTGTTACACATTACAATATAAAA TGTTGTATTGTTGTAGAAAGAGTAGATAGAATTATGAGTTTATCTTTTTTGTAATCTGAAATTT AAGTTCTGCCACTGTTATGCCCATATTGCTTAGACAACCACACACAGCTGATCTTGCTGTAAAA CGCTCTCTAGTAACTAAAAAGGTCACATATGATGTTATCTCAAATTCAGAACTTGTCCTATGGA TTACCTGAAATAAGTCCGAATGTTAGAGGGTTGATATAATTTTAAATTTACCTTCACCATAAGC TTGCATTTGAGTCGATAAGTGATTCTATTGAGGTAGGAGGTTCAGAAAATTATGTGTTTGAACC TCCACAATGCTATTTTCTTTTCAATTAACATTGATTTCTACTTGTTGGGCTTTTTACAAAATTT CAAGCGTTATTTGGAAAATGTTAAAAGTATTGGTATAATTAAATTTACTCTAACTCTTCAACTT AAACTTTTGGGTCAATCGGTGATTTAACTTTGCATATGAATAGAAGGTTCTGTGTTCAAACTTT TGCAATGTTATTCATTTCACAATTAATATTGACTTCCAATTTTTGGGTCCTCTACATCTTCAAA CCCACAAGTGGAGGGAGTGTTGGAGTTTTGATATATTCAATTTACCTTCACTCATAAGCTTCAG TTTTTGGGTCAATATGTGTTTTAACACCTACTTTATTGCTTTATCAGTGAATGGGTTGCAAAAG CATTTGAATTGTGCTGTTTTTATTTGCTAGCCTTGTGAAGAATTCTGCTCAAATATTTTGTTGG CCTAACCATACTTTCTCTCTGTTCATGCAGCAATATTGCAGGTTCCTTGCAGTCATAAAAAGAA GCCACCTAGATCTGGATACCGACGTTCACGGATTAACCGTATGAATTCTTTTTCCCTTGACTCT TTTCTCCCTACTTTTATGATGTGATTAAGGAGAAAGAGACTTTTATAACTATTTCTGTGTGTGT GCACGTTTTTTATTTATTTGTTTGTATTAAACTACCAATTCATCCAAAAGCTGAAGCTGGTGGT TAAAGGCAAATTTAATTATATATCACAAACAGTTTGTTTGTTTATTCTAAGGCTTGAATAGGGT GAACTAGGAGGCACAAACACATTAGTTTGGCTTGCATGCCAGACACATGTTGAATACTTAGACC CTCCAACACATATTGGACATGTATCGGAAACTTGAAACTTGTTAGTGCAATAAATGTCTAAACA TTATTTGTACAAAGTCAGCATAGATCCCACTTGTTAGTCACATATCAAACACTTGTTAAGTACT AAATAGATACGTATAAAACAAAAATACATCAAACTCATTTTTAAAGCATATTAATGCATAAAAT CACGGACTTTGAATTTTATTCCAGTGTGACATTGGTATATGTATGTGTATATTAAAAATATATA TATTTAATAAACATGTCCTAGCTTTGGAAAATAATGTGCTGTTGTGTTCGTGTCGAATCCACTA TTTGTATATCTGATGATTTATTCACTAATGTGCACATAATTCACACCTATCTGTATATGTGTCT ATCATTGAATCCACTATTGTATATCTGATGTCTAGAATTCGCAAACAAGAAGCCATCATTGTCA AGATTGACTTTGAAAAGGTGTGATCATGACTTCCAGGATAGGGTGTTGGCAAAGAAAGGTTTTG GGTTTAAATGGAGGTTGTGAATTTGGAGTAGTATTAGATGAATGAGGCGTTTTTTTTAGAAAAA CACAACAAAACTTTTCACTAATATAATTAAAAGAGACTATTTGATATGAAAACCCTAGGAATTG CCTAGGAACCCAATTGGTGAACCCCTAAATATCAAATCTTAAAACCCCTAAATCAATTTGACAG CAATCCAAAGAGAAAGACTAGAAGTGGATTACCTTTTGATCGAAGACCAAGAGATAAGGAGAAC TAGTTAGTTCCTCACTCCAAGTTCAAACACTCCACAAGCAAAGTGAGCAAACTTATCTGAATGT TCTTGGCATGCAACCTTGGATCAAGTATTGCAAAAGGTGGTGAGAATTTCTATTGATAGGAAAT ACCCTAAACATCAATTGTCAAATACTAACTTGAAACAACCTACAGGAAAGGCTTAAATAGCCTT CCAATAAAACCCTAATGCATTGTGAAAAAACTATTAACCATACTTAAATGTTATTAAAAAGGAT AAAAACTGAAAAAAATTTAAATTAGACCACAATTATGAAATAAAATTTAATTGATAATTTGATT TTTGGTTGGTTCATATCACTATTGCTCAAGTTACAAACTAGACATACTAATCCAAGTAAACTAG AAGATAAGGGGATCAACAAGCAGACCTAGATATCTCAACTAGGTTGACACACCCTTAAACGCCC TCATGATATCCCGATATTGAAATAAGAGCCAATGCTCAACTTAAGAAGGTACAATAAAATATAA CATGAACTCATTAATTAGATAAAAAGAAAAGTTGAATCTAATCTAGGAAGATGAAAGCTCTTCA ATTTAAACAGATGTCTTGCATTGAAAAGCTTGAAAATTGCTTGAGTTCAATCTTTTGCCTTGTT GTGGAAGGTTAAAGTTGTTTATGTCAGTTCTCCATGGAAATATTAACACCTTCGGTAGGATTTT GAGGAGGGTTCTCAATTTGATGGAGCCTTCGTGTTGCATTTGTAAATGGAGAGCAGCCAAGGAT CTCTTGATTAAAGGAATATCCACTAGAGTTGTGAATTTGCATATGTAGCTTCGAGTAGTTTTTC GGAGTTTGGGTATTGGTTTGGCCAGGCAATATTTTATTATTTCCACTGTCATTGCTTGTTCTCG TTCTATAAATTTATAGTTTCAAGATGATTTTTTTCATGAATTGCGTTGAAAACTTTTATTTGAT TTAATATAATTGTTTTTTTCCCTTGTAGCTTCAACGTGGGAAATAAGGTGCTTAAATACAGCTA TGGGTTCAAATGCTCCAAAATGTCTTGTTACTCAAATACTAGAGATACAACCGGCAGGCTGGTT CAAATGGCAGAGAAATCACCCTTCAAAGTTTGAAAAGAGTGTTCCTTATGCATTGTTGTGCCAA GTTGCAGGTATGTTGATTACAAAAGACAATCATTGTATGTATTTTTAATTATTGTACTTTCATA TCTGATTATATTTCATTACTACCTGTATAGACAATAGTTCGTTTGTAGCTATCCCTTCCAAGAA AATATTTAACAGAAACAACCCCCATCTCTTTGGAACGAACTATTAACTGCTCTGAGTTGTAGAG CATTTTTCCGTCCCTCTGAAAAGATGAGAAGACATCACAATCCTTAAAAAAGATACATGTGCTA CTTCTCATTTCCAATTCATTTTGAGATGAAGCTCTATGTTTATCTAATATGGTATTAGAGTCCA TGAAGTCCAAATACTGGTAAAAAAAAATAGCTTAAGAATAGTGAACTCAAAAAGTGGCACTTGT TATTATGTCCTTTGTCTGCTTTGCCCAAATAAGTATTCAGTATTTACTTCTTTGCTATCTGGAA CCATGCTTTAACTTTCAATAACATGGCTTAATCTTTTTAAGTTTTTATAACAACACCTAAAAAG AATGAACTAGGGTTTTCATTCACTGGAAATTTTGTTTCTGGATTCCCAATTTTCAGGTCTAAAG GAATATGTTTTGGCAAATCCTGCTCTAAACTATGAAAACCTGCCCACTGTTGTCCGTTCAAAAA TCTCAGATGGCTCTACTACGAACAGTGACTATGATGATGGAGAAGTGCAGGATGAATTTTATGA TGCAATTGCTGCCGATTCATCATCTTCGGAAGAGGAAAGTGATAATGATAAAGAACTTAACAAT AAGGTAGTTCTCTTCTTCATTTGAATTAGATTTAGGTTCATTTCTTAATCCCTCACTAATCATT CATCAAGATCTTGAGATTTTACGTCCCAAAGTTCACTTGCTCTGAAATTAAATGTCTTATTTAC AGAAGCGAGAAATATATCATGTATGTATAGAAGGCCAAAAATACAACTCAAAAGGCAAAGGGGA AGAGAGAAATTTAAATGCTTACTTACTACTTTTCTATTACAGGAATTAAAAGTGAAGCTGAAAA ATGTGTCATGGGCTATAGCTGGCTTTTCTTTGAAGCGAAAATCAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.090530993

Conservation Information
Conserved circRNAs	NA
PMCS	0.090530993

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							1546063-1544881(+)
1544903-1544881(+)
						
						Potential amino acid sequence
						
							MGYSWLFFEAKIRSQCKRDFIFSRQWFRGQDGTYTILQVPCSHKKKPPRSGYRRSRINPSTWEI
RCLNTAMGSNAPKCLVTQILEIQPAGWFKWQRNHPSKFEKSVPYALLCQVAGLKEYVLANPALN
YENLPTVVRSKISDGSTTNSDYDDGEVQDEFYDAIAADSSSSEEESDNDKELNNKELKVKLKNV
SWAIAGFSLKRKSDPNAKETLSSPDNGLEDKMEHIQYCRFLAVIKRSHLDLDTDVHGLTLQRGK
*
MGSNAPKCLVTQILEIQPAGWFKWQRNHPSKFEKSVPYALLCQVAGLKEYVLANPALNYENLPT
VVRSKISDGSTTNSDYDDGEVQDEFYDAIAADSSSSEEESDNDKELNNKELKVKLKNVSWAIAG
FSLKRKSDPNAKETLSSPDNGLEDKMEHIQYCRFLAVIKRSHLDLDTDVHGLTLQRGK*
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to salt stress in root

Functional Information
Coding potential	Y
Potential coding position	1546063-1544881(+) 1544903-1544881(+)
Potential amino acid sequence	MGYSWLFFEAKIRSQCKRDFIFSRQWFRGQDGTYTILQVPCSHKKKPPRSGYRRSRINPSTWEI RCLNTAMGSNAPKCLVTQILEIQPAGWFKWQRNHPSKFEKSVPYALLCQVAGLKEYVLANPALN YENLPTVVRSKISDGSTTNSDYDDGEVQDEFYDAIAADSSSSEEESDNDKELNNKELKVKLKNV SWAIAGFSLKRKSDPNAKETLSSPDNGLEDKMEHIQYCRFLAVIKRSHLDLDTDVHGLTLQRGK * MGSNAPKCLVTQILEIQPAGWFKWQRNHPSKFEKSVPYALLCQVAGLKEYVLANPALNYENLPT VVRSKISDGSTTNSDYDDGEVQDEFYDAIAADSSSSEEESDNDKELNNKELKVKLKNVSWAIAG FSLKRKSDPNAKETLSSPDNGLEDKMEHIQYCRFLAVIKRSHLDLDTDVHGLTLQRGK*
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to salt stress in root

			
						 Other Information
					
						References
						He et al., 2020

circRNA

Detail information of Csa2G009280_circ_g.3

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