Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G08620_circ_g.3 |
ID in PlantcircBase | ath_circ_001431 |
Alias | At_ciR2187 |
Organism | Arabidpsis thaliana |
Position | chr1: 2737268-2738029 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | CIRCexplorer, find_circ |
Parent gene | AT1G08620 |
Parent gene annotation |
Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 4/1 |
Tissues | leaf/aerial |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G08620.1:3 AT1G08620.4:3 AT1G08620.3:2 AT1G08620.2:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.127767969 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015;Chu et al., 2017 |