Splice junction sequence |
GGGGAGTAAATCCATTCACACCAAGTTCAACGCTATTGTTGACTCTGGCACCTCTTTCACAGCT CTGTCTGATCCGATGTACACTCAAATCACTAGCAGCcttgcattacgcggtggtggcgctgggg acgccgaacgtgacgttcctggtggcgctggacaccggcagcgacctcttctgggtgccctgcg actgcatc
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 736 Transcript exons: 180837387-180837519,180837597-180838063,180838133-180838 268 CTTGCATTACGCGGTGGTGGCGCTGGGGACGCCGAACGTGACGTTCCTGGTGGCGCTGGACACC GGCAGCGACCTCTTCTGGGTGCCCTGCGACTGCATCAACTGCGCGCCACTAGTCTCACCCAACT ACAGGGATCTCAAGTTCGACACTTACAGCCCTCAGAAGTCGAGCACTAGCCGAAAGGTCCCATG CAGCAGCAATTTGTGCGATGAACAGAGTGCATGCCGGTCAGCAAGCAGCAGCTGCCCCTACAGC ATCCAATACCTGTCTGATAACACATCATCCACCGGTGTGCTGGTTGAGGATGTCCTGTACCTGG TCACGGAGTATGGGCGGCAACCCAAAATCGTTACGGCCCCCATAACGTTCGGCTGTGGACGGAC TCAGACGGGTTCATTTCTGGGCACTGCTGCACCCAATGGTCTACTTGGCCTGGGCATGGACACC ATATCGGTCCCCAGTTTGCTAGCAAGTCAGGGAGTTGCTGCTGCCAATTCCTTCTCCATGTGCT TCGCACAAGATGGCCATGGTAGAATCAATTTTGGGGACACTGGAAGCTCAGATCAGCAGGAAAC CCCGTTAAACATGTATAAACAAAATCCATACTACAACATAAGCATCACTGGTGCTACGGTGGGG AGTAAATCCATTCACACCAAGTTCAACGCTATTGTTGACTCTGGCACCTCTTTCACAGCTCTGT CTGATCCGATGTACACTCAAATCACTAGCAGC
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Genomic sequence |
CTTGCATTACGCGGTGGTGGCGCTGGGGACGCCGAACGTGACGTTCCTGGTGGCGCTGGACACC GGCAGCGACCTCTTCTGGGTGCCCTGCGACTGCATCAACTGCGCGCCACTAGTCTCACCCAACT ACAGGGTACTACCACCAAACCAAATTGTCTGTAATCCATGGACTGTACTACCACCAAATTTTCA TTGTGTAAATTTGCACAGGATCTCAAGTTCGACACTTACAGCCCTCAGAAGTCGAGCACTAGCC GAAAGGTCCCATGCAGCAGCAATTTGTGCGATGAACAGAGTGCATGCCGGTCAGCAAGCAGCAG CTGCCCCTACAGCATCCAATACCTGTCTGATAACACATCATCCACCGGTGTGCTGGTTGAGGAT GTCCTGTACCTGGTCACGGAGTATGGGCGGCAACCCAAAATCGTTACGGCCCCCATAACGTTCG GCTGTGGACGGACTCAGACGGGTTCATTTCTGGGCACTGCTGCACCCAATGGTCTACTTGGCCT GGGCATGGACACCATATCGGTCCCCAGTTTGCTAGCAAGTCAGGGAGTTGCTGCTGCCAATTCC TTCTCCATGTGCTTCGCACAAGATGGCCATGGTAGAATCAATTTTGGGGACACTGGAAGCTCAG ATCAGCAGGAAACCCCGTTAAACATGTATAAACAAAAGTAAGTACGTACGTACGTGTTCCCTTT CTTCTCGTCGTCAACCTCATATGTACGTTCTTCCATCTGCAGTCCATACTACAACATAAGCATC ACTGGTGCTACGGTGGGGAGTAAATCCATTCACACCAAGTTCAACGCTATTGTTGACTCTGGCA CCTCTTTCACAGCTCTGTCTGATCCGATGTACACTCAAATCACTAGCAGC |