Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | Chr3_circ_ig.153 |
| ID in PlantcircBase | csa_circ_002204 |
| Alias | Chr3:38159556_38164454 |
| Organism | Cucumis sativus |
| Position | chrChr3: 38159556-38164454 JBrowse» |
| Reference genome | Cucumis sativus v1.5 |
| Type | ig-circRNA |
| Identification method | CIRI2 |
| Parent gene | NA |
| Parent gene annotation | NA |
| Parent gene strand | NA |
| Alternative splicing | Chr3_circ_ig.150 Chr3_circ_ig.151 Chr3_circ_ig.152 Chr3_circ_ig.154 Chr3_circ_ig.155 Chr3_circ_ig.156 Chr3_circ_ig.157 |
| Support reads | NA |
| Tissues | leaf,root |
| Exon boundary | NA-NA |
| Splicing signals | GT-AG |
| Number of exons covered | NA |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.470777694 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | responsive to salt stress in leaf |
| Other Information | |
|---|---|
| References | Zhu et al., 2019 |