Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Zm00001d047912_circ_g.1 |
ID in PlantcircBase | zma_circ_003032 |
Alias | circ1418, ovule_test_circ_004631 |
Organism | Zea mays |
Position | chr9: 145086010-145086148 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRI, find_circ |
Parent gene | Zm00001d047912 |
Parent gene annotation |
Translation initiation factor IF-2 |
Parent gene strand | - |
Alternative splicing | Zm00001d047912_circ_g.2 Zm00001d047912_circ_g.3 |
Support reads | 4 |
Tissues | seedling leaves, ovule |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d047912_T001:1 Zm00001d047912_T003:1 Zm00001d047912_T002:1 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.534214149 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chen et al., 2017b; Tang et al., 2018 |