Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT3G08020_circ_g.3 |
ID in PlantcircBase | ath_circ_020406 |
Alias | 3:2559508-2560451 |
Organism | Arabidpsis thaliana |
Position | chr3: 2559508-2560451 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT3G08020 |
Parent gene annotation |
PHD finger family protein |
Parent gene strand | - |
Alternative splicing | AT3G08020_circ_g.1 AT3G08020_circ_g.2 AT3G08020_circ_g.4 AT3G08020_circ_g.5 AT3G08020_circ_g.6 |
Support reads | 1/1/2 |
Tissues | seedling;root;leaf |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT3G08020.1:5 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.175119208 |
Functional Information | |
---|---|
Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Philips et al., 2020 |