Plant Circular RNA Database

Detail information of Solyc09g009350.2_circ_g.1

			
						 General Information
					
						CircRNA Name
						Solyc09g009350.2_circ_g.1
					
						ID in PlantcircBase
						sly_circ_002777
					
						Alias
						NA
					
						Organism
						
							Solanum lycopersicum						
					
						Position
						
							chr9: 2755542-2760130  JBrowse»						
					
						Reference genome
						
							SL2.50.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						Segemehl, CIRI
					
						Parent gene
						
							Solyc09g009350.2						
					
						Parent gene annotation
						
							protein_coding
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Solyc09g009350.2_circ_g.2 						
					
						Support reads
						NA
					
						Tissues
						fruit
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Solyc09g009350.2.1:4

General Information
CircRNA Name	Solyc09g009350.2_circ_g.1
ID in PlantcircBase	sly_circ_002777
Alias	NA
Organism	Solanum lycopersicum
Position	chr9: 2755542-2760130 JBrowse»
Reference genome	SL2.50.38
Type	e-circRNA
Identification method	Segemehl, CIRI
Parent gene	Solyc09g009350.2
Parent gene annotation	protein_coding
Parent gene strand	+
Alternative splicing	Solyc09g009350.2_circ_g.2
Support reads	NA
Tissues	fruit
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Solyc09g009350.2.1:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GCAGAAGGTGAATGCTTTAGAAGCTAGTTTCATACAAGCACCTTCAGGGGAAAATGTTGACTGG
AGTCTATCTGCAAGAATCTCTACTTGCGATGTTACGctataggttctcttgggaccaaattcaa
gccctatgtcgtcttcgtcggcgttatgtacagctatattctgattcattgcaacagctgccga
acgttaat

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 712
Transcript exons: 2755542-2755700,2757872-2757964,2758128-2758473,2760017-
2760130
CTATAGGTTCTCTTGGGACCAAATTCAAGCCCTATGTCGTCTTCGTCGGCGTTATGTACAGCTA
TATTCTGATTCATTGCAACAGCTGCCGAACGTTAATAGATCAGAGATCAGAAACATTGAGAAAG
ATCTCGATCCTAAGGTTATTTTACTGTGGAGGTTTCTTGCTCATGCAAAGGTTGAATCTTTGAA
ATCAAAGGAGGCAGCTGAACAAAGAATGCTTAGAAAGAGAAGCTGGTTTTCTTTTACATGGAGT
ACAGATACTGCAGATGTGTCTGCGGGGGACACTTCTAAAGAAGCTAATACAATGGAGGACCAAT
TGACTCGGGAGGAGTGGCAAGCAATCAATAAATTACTTAGTTACCAGCCAGATGAGGAATTGGC
ACTGCAGCATGGGAAGGAAAATGTGATCCACTACTTGTTAAATGTTTCTATCAGTAGGGCAGCT
GCAAGGATAATTGATATAGATCAGATAGAGATCGTTGGCGGTAGATTTGAAAATCTTTATGTGT
CAACGAAGCTCAAGAATCGAAACTCCCATTGCGATCTGACACTGAAATTTTACGGATTGTACGC
TCCTGAGGGTTCCCTTGCCCAGAGTGTCGTTAGTGAGCAGAAGGTGAATGCTTTAGAAGCTAGT
TTCATACAAGCACCTTCAGGGGAAAATGTTGACTGGAGTCTATCTGCAAGAATCTCTACTTGCG
ATGTTACG
						
					

						Genomic sequence
						
							CTATAGGTTCTCTTGGGACCAAATTCAAGCCCTATGTCGTCTTCGTCGGCGTTATGTACAGCTA
TATTCTGATTCATTGCAACAGCTGCCGAACGTTAATAGATCAGAGATCAGAAACATTGAGAAAG
ATCTCGATCCTAAGGTTATTTTACTGTGGAGGTAGGTTGTATAATTTTTCTTCCTATTACCGGC
ACCATTTTAAACATTTATGTTTCTTGATATTGGAATAGCTGGTGATGAACTTCCTTCTTTTTGA
CTTGTATTAGTACTATCCTTTCTCTTTCTGTAAAATTGTCACTAAGCTGATAGGGGTCTCTTAG
CTTGTAGTATACCACAATTATTCTTTTCTTTGTTTTCTCTTTTTCCATATTTTGGGGGTAAGAA
TGGAAATCCACGTACATATGTATACACAGTCATAACAGAACTTCAAACAAAAATATAAATCTCT
GAAAACAAACAATTAGTCGTTACATTTCTTGGACCTCATACAAGCTCCAAAAATGTATGGAAAA
CATAAAGTCCTCAACTTTGCACGAAAGAGCTATCACTTTGCCAAAGACACTTTCCCAAATTTAC
AGCTAAATATAGAAACCTTCCTCACAAAGGTTCCTCTATGGAGACGAACTATGATGGGAGTAAA
TGGCTTTTCAACAATATCGGCTCATGATTGGAAATGGAAATCGCAAACGTTCGGCTTAATGTGG
TGCAGGGAGTTTGTTCCTGCTTCAGTAGTAAATGTTAAGACGGAAATAGTGGATTTACATGTTA
AGGATATTTATGAAACATATTGGGATATATTATTTAGGAGGCATAGGCCAGTTCGAAAACGTGA
AAAGTGAAGTATCTTCTTCATAAAATATGTTAGTGTTGAGTTGATCTGCGGTTTTTCTGCCTAT
TTGTTTTCTTTGGTGGACTCAAATCAGCTGCTTGCTATTGCAATGTTGCATTAGGAAAATAAGC
TATGCAGAGGGAATTCAGGGTGCATGTAGACAATAAGCTTAGCAGATGGAATCAAAGATTTATG
TAGCTTAACCAAGCCAATTTGGCACAATTTGATTGAAAGCATTGACATACATGAACCTACATAA
GAACATCAACTTAGCCGTGAGCATCCAATCTCTTCAAGCATCAAACTACATTAAAATGTTAAAG
CAGTATGCCCCTTGTAATGGAGAGGGCCAGTGACAAAATCTTTCTTTGTGAAATTCTATATATT
TGCTTGATTAATGAGTAAGATGTCCAACTCAGATAGAGAGATCTTGGGAGATGGGTGCTCTCCA
AAAGTAGCTTTATTTGCTAGGTGTGTTGCATGTGATGCTATTCTTGTAATGCATAATTTAAGGA
GGGATATGTGGTGCAATTCAGAAAAAAAGACCAAGCGAAATTGTATTTTGTTATTTTGCTTTTG
GTGTACTAAATTTTACTCTGGCGATACAGACTCAATCCTATATGTGCTAGGTACCATTAGGCTT
TATTTACTTTTGACATACTTTGTATCTTATCTCACTCTTGTAAATATGGTTTTTCAGTACTAAA
TAAGTACTATATGAATACAAAAATGTTGCCTGATTGAAAAACGATATGTGGTGTTGCATGCAAA
AGAAGGTGGTAAGGACACATGCCATTTGTTCCTTCACTGTGTGTTCATGTTGGAATCAAGAAAT
GCTATACCCATTGTTTAACATTTCTTGGGGAATTCCTGGAATAGTGGCAGTTACTGTAGCAGCT
TGGAGGTTGGACAGAAAGGGGGCAAGAAAAAGAAGTTGGTGACTAGCACATTTGTGCATGTATT
GGATGATTTGGAGATAGGAATAGAAGAGTGGTTGAAGGAGTTGAAAAGCTGGCGCAAAAAATAT
CCTTGTGTTTTGTATGAAAAAAGTCTTCTACTTTTTTTTAATAGATAGTTGGATCTATATATTG
GAGTTCCGTTCTGAACATTTGGAGTATAATGGTTGGAAGCAGTTATGAAAAGAAACAAACAGGT
GTCCTTTCTTATGCTAGAGTTGTGTATCCGGATCTCAAACATGATTTTTATTAAGATATATTGT
AAAATTGCAACCCAATATAAAAGAAGCTTGCCTATTGATACTAGAGGATATCATAAAATGGAAC
TTTTGTGTCAATGGTGATATCCCTTCATTTGTAAATCATTGCCTTTGATGTATAACCCTAGAAT
CAGTTCTCAGCCTCCTGAATTCTTATCTTCTTTCAGCCCTCGTGTATTCGCCATACTGTTATAT
CCTTGAATGCACCGAAACTTCATGTAATTTCTAGATTGTATTCACTTCAATTAGTGATAAGGTT
TTCTAATTTGGTGGATTGTCTTCTAGGTTTCTTGCTCATGCAAAGGTTGAATCTTTGAAATCAA
AGGAGGCAGCTGAACAAAGAATGCTTAGAAAGAGAAGCTGGTTTTCTTTTACATGGTTGGTCTT
AAACTACGTCCTTTTATCTGTTCATAAACAATTTTGTATTTTATTGTTAACTGTTCTGAAATTC
CTTATCTCTTGCTCTTTGTGACTGATCTTTTCCTGATGTTTATCTTCACTTATCTTTCACACAT
TTAGATTTTTTTGCTCGTGACTGTAGGAGTACAGATACTGCAGATGTGTCTGCGGGGGACACTT
CTAAAGAAGCTAATACAATGGAGGACCAATTGACTCGGGAGGAGTGGCAAGCAATCAATAAATT
ACTTAGTTACCAGCCAGATGAGGAATTGGCACTGCAGCATGGGAAGGAAAATGTGATCCACTAC
TTGTTAAATGTTTCTATCAGTAGGGCAGCTGCAAGGATAATTGATATAGATCAGATAGAGATCG
TTGGCGGTAGATTTGAAAATCTTTATGTGTCAACGAAGCTCAAGAATCGAAACTCCCATTGCGA
TCTGACACTGAAATTTTACGGATTGTACGCTCCTGAGGGTTCCCTTGCCCAGGTCTGCCTTTTA
ATAAAATGTCCTCTTTCTGCATGGCTGTAATTAACTGAACATGTGAATCTAAAAGTACAGCATT
ATGTGTCTGTATAGCCTTTTAGTTAGGTCTCCTGTTCGAGTCATGACGCAATTAGAACAATTCA
TTAGATCCCACGGCTGGTGCTATCTGTGATTAAAACTGGTGATATCTGGTACTTAAGTTCCATT
TTCAATTCTCTATCCGTCGTTCACTCGTTATTTAGGTTCCTTTGCCAATCCTCTATTGTGATTT
TTTTCTCTTTATTATGTTTATTAATGTCAGAGATTCTATAATTGGTGTTATAAAATTTTGCAAA
AAGAAGTTAATTTTTTTGCATATATAATCCTTGATATTTTTTTCCAACTGTGGTGTATGGCTAG
CTTGCATGCTCCTTGATTAATCCACCATTTATCTGCTATCCTTGATCAAGACATACACTTGGGC
ACAGTCCACCAAGGCTTGATGCAGAGATGGAAAAAATTAACTATTATTTTTTTTTATCACTGTT
GAGATTCGAATTATGCACTGTGCTAGAATCATGGCTTAACTTGAGCATAAAATTGCACTTGCAC
ATTTTCTTATGGTGTGTATGTTTTGGAGCTTCCACGTTTGATTAAAAATATGTAGGATTAGTTC
TTTAATGTAGTAAGGTTATCATGGAAATATATTCTTGTTCTTGGTTATACATTTTCTTGTTTTT
GGGATTCAGCTAGGCGTATTGGAAAAGGAGAAATAGATACACTTCGATTGAAATGAAATTCATC
ACTTCCTTATTCCGTGAACCTGAGAAAAGTTTCTTTAATACTCCCCCCGTTTAAAAAAGAATGA
CCCTTATTCCTTTTTAGTCTATTTAAAAAAGAATGACTCTTTTCCTTTTTTGGCAGCATTTTAA
CTTTAACTTTCCACGTGGCATGTTTAAGACCACAAGATTAAAGGACATTTTGGTACATTTGACA
TAACTTTAATTTAGATCACAAGATTAAAAAGTCTTTTCTTTTCTTAAACTCCATTCCAAGTCAA
ACTAGGCCATTCTTTTTGAAACAGCGGAGTATGTTTTTGCTCTGTAAACTCAGTTATCTTTAGT
GATTGTACTGCAGACTGAGTGCTGTCAGTAATTTGCTCCCAAAGAGAGGCAACTCCATTGAAGT
AACCTTATGTTGATTCTCTTACTGAAATGATCTGAAATTATATGATCTAATTCTGCTGAACAAC
AAAAAAAACACAACAAAATGAAGCAAACAAATCCTCATAATTTAGCACGTGGCATCACAGGAAT
GCATTGGAAGTAAATGTTTCAATGTAATTGCTCTTTTTCTGCTAAAATAAGTCAATAATGATAA
ATTCTGTGAGTACTAAATCAATTGTGATTTCCCCATTTGAGCACGAGCTAACCTGAATAGTAGG
GTGGAATGGATATTGATGATTATATAGCTGACCCCAACTAATTTGGAATTGATGCGTAGTTCAT
ATATTTGTTTTTTGCTATACATATGAGCAGTTGTGATTACCGGAAGTATTTGTTTGCAGAGTGT
CGTTAGTGAGCAGAAGGTGAATGCTTTAGAAGCTAGTTTCATACAAGCACCTTCAGGGGAAAAT
GTTGACTGGAGTCTATCTGCAAGAATCTCTACTTGCGATGTTACG
						
					

			
		

Sequences
Splice junction sequence	GCAGAAGGTGAATGCTTTAGAAGCTAGTTTCATACAAGCACCTTCAGGGGAAAATGTTGACTGG AGTCTATCTGCAAGAATCTCTACTTGCGATGTTACGctataggttctcttgggaccaaattcaa gccctatgtcgtcttcgtcggcgttatgtacagctatattctgattcattgcaacagctgccga acgttaat
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 712 Transcript exons: 2755542-2755700,2757872-2757964,2758128-2758473,2760017- 2760130 CTATAGGTTCTCTTGGGACCAAATTCAAGCCCTATGTCGTCTTCGTCGGCGTTATGTACAGCTA TATTCTGATTCATTGCAACAGCTGCCGAACGTTAATAGATCAGAGATCAGAAACATTGAGAAAG ATCTCGATCCTAAGGTTATTTTACTGTGGAGGTTTCTTGCTCATGCAAAGGTTGAATCTTTGAA ATCAAAGGAGGCAGCTGAACAAAGAATGCTTAGAAAGAGAAGCTGGTTTTCTTTTACATGGAGT ACAGATACTGCAGATGTGTCTGCGGGGGACACTTCTAAAGAAGCTAATACAATGGAGGACCAAT TGACTCGGGAGGAGTGGCAAGCAATCAATAAATTACTTAGTTACCAGCCAGATGAGGAATTGGC ACTGCAGCATGGGAAGGAAAATGTGATCCACTACTTGTTAAATGTTTCTATCAGTAGGGCAGCT GCAAGGATAATTGATATAGATCAGATAGAGATCGTTGGCGGTAGATTTGAAAATCTTTATGTGT CAACGAAGCTCAAGAATCGAAACTCCCATTGCGATCTGACACTGAAATTTTACGGATTGTACGC TCCTGAGGGTTCCCTTGCCCAGAGTGTCGTTAGTGAGCAGAAGGTGAATGCTTTAGAAGCTAGT TTCATACAAGCACCTTCAGGGGAAAATGTTGACTGGAGTCTATCTGCAAGAATCTCTACTTGCG ATGTTACG
Genomic sequence	CTATAGGTTCTCTTGGGACCAAATTCAAGCCCTATGTCGTCTTCGTCGGCGTTATGTACAGCTA TATTCTGATTCATTGCAACAGCTGCCGAACGTTAATAGATCAGAGATCAGAAACATTGAGAAAG ATCTCGATCCTAAGGTTATTTTACTGTGGAGGTAGGTTGTATAATTTTTCTTCCTATTACCGGC ACCATTTTAAACATTTATGTTTCTTGATATTGGAATAGCTGGTGATGAACTTCCTTCTTTTTGA CTTGTATTAGTACTATCCTTTCTCTTTCTGTAAAATTGTCACTAAGCTGATAGGGGTCTCTTAG CTTGTAGTATACCACAATTATTCTTTTCTTTGTTTTCTCTTTTTCCATATTTTGGGGGTAAGAA TGGAAATCCACGTACATATGTATACACAGTCATAACAGAACTTCAAACAAAAATATAAATCTCT GAAAACAAACAATTAGTCGTTACATTTCTTGGACCTCATACAAGCTCCAAAAATGTATGGAAAA CATAAAGTCCTCAACTTTGCACGAAAGAGCTATCACTTTGCCAAAGACACTTTCCCAAATTTAC AGCTAAATATAGAAACCTTCCTCACAAAGGTTCCTCTATGGAGACGAACTATGATGGGAGTAAA TGGCTTTTCAACAATATCGGCTCATGATTGGAAATGGAAATCGCAAACGTTCGGCTTAATGTGG TGCAGGGAGTTTGTTCCTGCTTCAGTAGTAAATGTTAAGACGGAAATAGTGGATTTACATGTTA AGGATATTTATGAAACATATTGGGATATATTATTTAGGAGGCATAGGCCAGTTCGAAAACGTGA AAAGTGAAGTATCTTCTTCATAAAATATGTTAGTGTTGAGTTGATCTGCGGTTTTTCTGCCTAT TTGTTTTCTTTGGTGGACTCAAATCAGCTGCTTGCTATTGCAATGTTGCATTAGGAAAATAAGC TATGCAGAGGGAATTCAGGGTGCATGTAGACAATAAGCTTAGCAGATGGAATCAAAGATTTATG TAGCTTAACCAAGCCAATTTGGCACAATTTGATTGAAAGCATTGACATACATGAACCTACATAA GAACATCAACTTAGCCGTGAGCATCCAATCTCTTCAAGCATCAAACTACATTAAAATGTTAAAG CAGTATGCCCCTTGTAATGGAGAGGGCCAGTGACAAAATCTTTCTTTGTGAAATTCTATATATT TGCTTGATTAATGAGTAAGATGTCCAACTCAGATAGAGAGATCTTGGGAGATGGGTGCTCTCCA AAAGTAGCTTTATTTGCTAGGTGTGTTGCATGTGATGCTATTCTTGTAATGCATAATTTAAGGA GGGATATGTGGTGCAATTCAGAAAAAAAGACCAAGCGAAATTGTATTTTGTTATTTTGCTTTTG GTGTACTAAATTTTACTCTGGCGATACAGACTCAATCCTATATGTGCTAGGTACCATTAGGCTT TATTTACTTTTGACATACTTTGTATCTTATCTCACTCTTGTAAATATGGTTTTTCAGTACTAAA TAAGTACTATATGAATACAAAAATGTTGCCTGATTGAAAAACGATATGTGGTGTTGCATGCAAA AGAAGGTGGTAAGGACACATGCCATTTGTTCCTTCACTGTGTGTTCATGTTGGAATCAAGAAAT GCTATACCCATTGTTTAACATTTCTTGGGGAATTCCTGGAATAGTGGCAGTTACTGTAGCAGCT TGGAGGTTGGACAGAAAGGGGGCAAGAAAAAGAAGTTGGTGACTAGCACATTTGTGCATGTATT GGATGATTTGGAGATAGGAATAGAAGAGTGGTTGAAGGAGTTGAAAAGCTGGCGCAAAAAATAT CCTTGTGTTTTGTATGAAAAAAGTCTTCTACTTTTTTTTAATAGATAGTTGGATCTATATATTG GAGTTCCGTTCTGAACATTTGGAGTATAATGGTTGGAAGCAGTTATGAAAAGAAACAAACAGGT GTCCTTTCTTATGCTAGAGTTGTGTATCCGGATCTCAAACATGATTTTTATTAAGATATATTGT AAAATTGCAACCCAATATAAAAGAAGCTTGCCTATTGATACTAGAGGATATCATAAAATGGAAC TTTTGTGTCAATGGTGATATCCCTTCATTTGTAAATCATTGCCTTTGATGTATAACCCTAGAAT CAGTTCTCAGCCTCCTGAATTCTTATCTTCTTTCAGCCCTCGTGTATTCGCCATACTGTTATAT CCTTGAATGCACCGAAACTTCATGTAATTTCTAGATTGTATTCACTTCAATTAGTGATAAGGTT TTCTAATTTGGTGGATTGTCTTCTAGGTTTCTTGCTCATGCAAAGGTTGAATCTTTGAAATCAA AGGAGGCAGCTGAACAAAGAATGCTTAGAAAGAGAAGCTGGTTTTCTTTTACATGGTTGGTCTT AAACTACGTCCTTTTATCTGTTCATAAACAATTTTGTATTTTATTGTTAACTGTTCTGAAATTC CTTATCTCTTGCTCTTTGTGACTGATCTTTTCCTGATGTTTATCTTCACTTATCTTTCACACAT TTAGATTTTTTTGCTCGTGACTGTAGGAGTACAGATACTGCAGATGTGTCTGCGGGGGACACTT CTAAAGAAGCTAATACAATGGAGGACCAATTGACTCGGGAGGAGTGGCAAGCAATCAATAAATT ACTTAGTTACCAGCCAGATGAGGAATTGGCACTGCAGCATGGGAAGGAAAATGTGATCCACTAC TTGTTAAATGTTTCTATCAGTAGGGCAGCTGCAAGGATAATTGATATAGATCAGATAGAGATCG TTGGCGGTAGATTTGAAAATCTTTATGTGTCAACGAAGCTCAAGAATCGAAACTCCCATTGCGA TCTGACACTGAAATTTTACGGATTGTACGCTCCTGAGGGTTCCCTTGCCCAGGTCTGCCTTTTA ATAAAATGTCCTCTTTCTGCATGGCTGTAATTAACTGAACATGTGAATCTAAAAGTACAGCATT ATGTGTCTGTATAGCCTTTTAGTTAGGTCTCCTGTTCGAGTCATGACGCAATTAGAACAATTCA TTAGATCCCACGGCTGGTGCTATCTGTGATTAAAACTGGTGATATCTGGTACTTAAGTTCCATT TTCAATTCTCTATCCGTCGTTCACTCGTTATTTAGGTTCCTTTGCCAATCCTCTATTGTGATTT TTTTCTCTTTATTATGTTTATTAATGTCAGAGATTCTATAATTGGTGTTATAAAATTTTGCAAA AAGAAGTTAATTTTTTTGCATATATAATCCTTGATATTTTTTTCCAACTGTGGTGTATGGCTAG CTTGCATGCTCCTTGATTAATCCACCATTTATCTGCTATCCTTGATCAAGACATACACTTGGGC ACAGTCCACCAAGGCTTGATGCAGAGATGGAAAAAATTAACTATTATTTTTTTTTATCACTGTT GAGATTCGAATTATGCACTGTGCTAGAATCATGGCTTAACTTGAGCATAAAATTGCACTTGCAC ATTTTCTTATGGTGTGTATGTTTTGGAGCTTCCACGTTTGATTAAAAATATGTAGGATTAGTTC TTTAATGTAGTAAGGTTATCATGGAAATATATTCTTGTTCTTGGTTATACATTTTCTTGTTTTT GGGATTCAGCTAGGCGTATTGGAAAAGGAGAAATAGATACACTTCGATTGAAATGAAATTCATC ACTTCCTTATTCCGTGAACCTGAGAAAAGTTTCTTTAATACTCCCCCCGTTTAAAAAAGAATGA CCCTTATTCCTTTTTAGTCTATTTAAAAAAGAATGACTCTTTTCCTTTTTTGGCAGCATTTTAA CTTTAACTTTCCACGTGGCATGTTTAAGACCACAAGATTAAAGGACATTTTGGTACATTTGACA TAACTTTAATTTAGATCACAAGATTAAAAAGTCTTTTCTTTTCTTAAACTCCATTCCAAGTCAA ACTAGGCCATTCTTTTTGAAACAGCGGAGTATGTTTTTGCTCTGTAAACTCAGTTATCTTTAGT GATTGTACTGCAGACTGAGTGCTGTCAGTAATTTGCTCCCAAAGAGAGGCAACTCCATTGAAGT AACCTTATGTTGATTCTCTTACTGAAATGATCTGAAATTATATGATCTAATTCTGCTGAACAAC AAAAAAAACACAACAAAATGAAGCAAACAAATCCTCATAATTTAGCACGTGGCATCACAGGAAT GCATTGGAAGTAAATGTTTCAATGTAATTGCTCTTTTTCTGCTAAAATAAGTCAATAATGATAA ATTCTGTGAGTACTAAATCAATTGTGATTTCCCCATTTGAGCACGAGCTAACCTGAATAGTAGG GTGGAATGGATATTGATGATTATATAGCTGACCCCAACTAATTTGGAATTGATGCGTAGTTCAT ATATTTGTTTTTTGCTATACATATGAGCAGTTGTGATTACCGGAAGTATTTGTTTGCAGAGTGT CGTTAGTGAGCAGAAGGTGAATGCTTTAGAAGCTAGTTTCATACAAGCACCTTCAGGGGAAAAT GTTGACTGGAGTCTATCTGCAAGAATCTCTACTTGCGATGTTACG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.502563343

Conservation Information
Conserved circRNAs	NA
PMCS	0.502563343

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							2757931-2755544(+)
2760085-2755544(+)
2755620-2758439(-)
						
						Potential amino acid sequence
						
							MLRKRSWFSFTWSTDTADVSAGDTSKEANTMEDQLTREEWQAINKLLSYQPDEELALQHGKENV
IHYLLNVSISRAAARIIDIDQIEIVGGRFENLYVSTKLKNRNSHCDLTLKFYGLYAPEGSLAQS
VVSEQKVNALEASFIQAPSGENVDWSLSARISTCDVTL*(+)
MLTGVYLQESLLAMLRYRFSWDQIQALCRLRRRYVQLYSDSLQQLPNVNRSEIRNIEKDLDPKV
ILLWRFLAHAKVESLKSKEAAEQRMLRKRSWFSFTWSTDTADVSAGDTSKEANTMEDQLTREEW
QAINKLLSYQPDEELALQHGKENVIHYLLNVSISRAAARIIDIDQIEIVGGRFENLYVSTKLKN
RNSHCDLTLKFYGLYAPEGSLAQSVVSEQKVNALEASFIQAPSGENVDWSLSARISTCDVTL*(
+)
MNQNIAVHNADEDDIGLEFGPKRTYSVTSQVEILADRLQSTFSPEGACMKLASKAFTFCSLTTL
WAREPSGAYNP*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	2757931-2755544(+) 2760085-2755544(+) 2755620-2758439(-)
Potential amino acid sequence	MLRKRSWFSFTWSTDTADVSAGDTSKEANTMEDQLTREEWQAINKLLSYQPDEELALQHGKENV IHYLLNVSISRAAARIIDIDQIEIVGGRFENLYVSTKLKNRNSHCDLTLKFYGLYAPEGSLAQS VVSEQKVNALEASFIQAPSGENVDWSLSARISTCDVTL(+) MLTGVYLQESLLAMLRYRFSWDQIQALCRLRRRYVQLYSDSLQQLPNVNRSEIRNIEKDLDPKV ILLWRFLAHAKVESLKSKEAAEQRMLRKRSWFSFTWSTDTADVSAGDTSKEANTMEDQLTREEW QAINKLLSYQPDEELALQHGKENVIHYLLNVSISRAAARIIDIDQIEIVGGRFENLYVSTKLKN RNSHCDLTLKFYGLYAPEGSLAQSVVSEQKVNALEASFIQAPSGENVDWSLSARISTCDVTL( +) MNQNIAVHNADEDDIGLEFGPKRTYSVTSQVEILADRLQSTFSPEGACMKLASKAFTFCSLTTL WAREPSGAYNP*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Tan et al., 2017

circRNA

Detail information of Solyc09g009350.2_circ_g.1

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