Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d008941_circ_g.1 |
ID in PlantcircBase | zma_circ_002702 |
Alias | circ2721 |
Organism | Zea mays |
Position | chr8: 26173425-26174545 JBrowse» |
Reference genome | AGPv4.38 |
Type | ue-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d008941 |
Parent gene annotation |
Histone-lysine N-methyltransferase ATX3 |
Parent gene strand | - |
Alternative splicing | Zm00001d008941_circ_g.2 |
Support reads | 79 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-AA |
Number of exons covered | Zm00001d008941_T002:5 Zm00001d008941_T005:5 Zm00001d008941_T007:5 Zm00001d008941_T013:5 Zm00001d008941_T001:5 Zm00001d008941_T015:5 Zm00001d008941_T004:5 Zm00001d008941_T010:5 Zm00001d008941_T012:5 Zm00001d008941_T008:5 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.11956069 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |